BDGP Sequence Production Resources |
Search the DGRC for FI01009
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 10 |
Well: | 9 |
Vector: | pFlc-1 |
Associated Gene/Transcript | vri-RC |
Protein status: | FI01009.pep: gold |
Sequenced Size: | 3075 |
Gene | Date | Evidence |
---|---|---|
vri | 2008-04-29 | Release 5.5 accounting |
vri | 2008-08-15 | Release 5.9 accounting |
vri | 2008-12-18 | 5.12 accounting |
3075 bp assembled on 2007-03-07
GenBank Submission: BT030402
> FI01009.complete ATGTTAAGTGATTTCTCAAGTGCGCTGTCTTGTGGCCAGCGATGAAAACA CACAAAGCCCCATGGATTTCTCAGCCGTTCTGATAAGAGTCATAAATACG GCTAATTCCCCGCATCCAAGCTCAAAGCAACAACAGCCATCTGCAACACC AGCAGCAACTGCAGCAGAAACTAGCGCAGCTGCATCACTACAGCCAGCAG AAGCTGAGCGGCAGCGACTTTCCCTACGGGCCACGCCCCCCCACCGGAGG CAAAGAGGAGAAGCTGCTCCTGCTAGCGCCGCCGGGCAAACTCTATCCGG AGGCGTCTGTGTCCACAGCAATGCCCGAGGTCCTCAGCGGCACGCCCACC AACAGCCACAACAAAGCCAACATCGCCATGATGAACAACGTCCGGCTATC CAATATATCGCCGACTCTCTCGATGAACGGCAGCTCCAACGAGGCTTCTA ACTTGCATCCGTTGTCCATGTACGGAGGATCCATAAGTCCGCAGTCAAAT GACAGCGGCATGTCCGACAGTCTGGGCAAATATGTCCCGGGAAGCGGCTA TGGAGATGGAATGATGGCCCAGTCGCCCTCACAGGGTGGCAATGGACCGC AGTCGGCGTTGACCGCCGCCCAGAAAGAGCTCTTCTCGCAGCGAAAGCAA CGCGAATTCACCCCGGACAACAAGAAGGACGAGAGCTACTGGGATCGCCG GAGAAGGAACAACGAGGCGGCCAAGCGGAGTCGAGAGAAGAGGCGCTACA ATGACATGGTTCTGGAGCAGCGCGTCATCGAGCTGACCAAAGAGAACCAT GTGCTGAAGGCCCAGCTGGACGCCATACGCGACAAGTTCAACATCTCCGG CGAGAATCTGGTGAGCGTGGAGAAGATCCTCGCCTCGCTGCCCACCAGCG AACAGGTGCTGAGTAACACAAAGCGCGCCAAGATGAGCGGCAGTGGTGGC TCCTCCTCGGGCTCCTCGCCCTCGGGCAGTGGATCGGGCGAGGGATCGCC TCAAGGTGGCCACAATGGCTATCCGGTGGGTCCACCACTATCTCCACTGA TCTACGGACCCAATGGCAATGCCCGGCCAGAGGCCACGGTTAAGAGTGTC CACCACATACATCATGCGGGTGTTGCGCCGCCACCAACGCACCTACAACA GTTGGTTGTGCCCCAGTCCCAGACACAGCATCTCTACCAGCCACAGCCGC AGCAGCATCAGCCGCATCAGCAGCAGCAGATTTCCCAGCCACCGCAGCAA CAACAGCAGCAGCAGGAGCCAAGTCCCAGTGCCGGCTCCAGTTCGCCAGT CATCTCCGATCCGCACAACCGCCCGCCAAGCACCACCATTGCCAATCTCC AGGTGCAACTGCAGCAGGCACTAAACCGCAATGTCAGGCCCGAGGATCTG GACAGCTTGCGCAAGGTGGTGGCCGCCGGCGCTCTATACAATGCGGCAGC CGTGGTGGGAGCACCACCACCGCCACCATCTGCTGGTCTCTACGTGCCCG CTCCCAGCGCCTATAAGGATCACCTGGAAGCGGCTGCAGCCTGGAGCCAC AATGTCGAGGCTGCTGTGAGCAGCAGTGCTGTGGATGCGGTCAGTAGCTC ATCGGTGTCCGGCAGTGCGGCCAGTGTGCTGAATCTATCGCGTCGGGCCT GCTCACCCAGCTACGAGCACATGCTCTCCTCCACCACCTCCTCCACTCTT TCCTCGGCCTCCTCATCGGGAGCTGTTTCCGGCGATGATGAGCAGGAGCA CGAACCAGCGCACATGGCTCCACTGCAGCTGCAGCGAAGCAGTCCGCAGC AGGGCAGCGATGCCAACAACTGTCTGCCCCTCAAGCTGCGCCACAAGTCC CATCTCGGCGACAAGGATGCGGCGGCCACGGCGCTACTCTCACTGCAGCA CATCAAGCAGGAGCCCAACTGCAGTCGGGCATCGCCGCCGGCTTGGAACG ATGGCGGCGACAATTCCAGCGACGAAAGGGACTCCGGCATCTCCATCGCC AGTGCGGAGTGGACGGCGCAGCTGCAGAGGAAGCTACTGGCGCCCAAGGA GGCCAATGTGGTAACCAGTGCCGAGCGCGATCAAATGCTCAAGTCGCAGC TGGAGCGCCTAGAGTCCGAGGTGGCCAGCATCAAGATGATCTTGGCGGAG TAAGCAAGCCCCTGTCCAAGCTGGACAGGATCACGACTAGGCGGATCAGG AGAGAGAGCGAAGAGACAGAGGCTCTGAAGGGATCAGAGTCGGGGGAGCA GAGCAGTAGATGGCAAAGCAGAGAGTTCCATGGCGCCAGTAGTTCTCCTG GACAAAGAAGTTGGTTTAAGCATATGTTAGTAGAGATGTCCAAAACCGAG TGATAACTATTAGATACCGATGCATGCATGTCTCCATCTCTATGTAGAAC TCTAGGGCCAGGTCTGGACCACAAGGATTTGACACAAGACCCTGTGGCCC GAAACTGGCCAACACTTATCTGTGTGTATGTTTATCTATCCACTGTATTG AGTCTTGTAATAGTGAATGTTTAACTATATAGATCTCGTCAACTCGGAGC TAAAAAAAAATCCTTAGGGTCAGCCCAAAAGAATTTCTAATTTAACCTGT TTGTTGTATACACACAAGCTATTTGTTTGCATAGCTAGCTGGTGACCTGC GATGAGCATCGGGGTCACCAGCCACGTTATTGTTCTCTTATGCATCCCAA GTTTCCTTATGCACAGCGAAAGTGGAGAAGATAAAGAATTATTATGTTTG TAAGCAAACGTTACAAAGTATTTGCTGTTGTACATATTACACAATTAATT ATATATACTATATAACTATACAGATATCTATATTCCTATCATGTACATAA TTTTAGTTGCAAGCTAAGCTTATTTTATTTTATTTTATTTTACTTTGTAT TGAGTACTATTATTATTATTATTATTATGTAGTGAAACAAACATATACAT TACACTTAAGAAACGCGTGAAGCACATTCAAAACGTGAGAGATGAAAGAA ATCTGAAAAGAATTGATGAATAAATTCTGCAATAAATAATTTTAAATATC CTCCTACCAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 5307120..5309724 | 454..3058 | 13010 | 100 | Plus |
chr2L | 23010047 | chr2L | 5306664..5307011 | 106..453 | 1740 | 100 | Plus |
chr2L | 23010047 | chr2L | 5298746..5298850 | 1..105 | 525 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker4 | 7359 | Stalker4 STALKER4 7359bp | 6619..6761 | 2903..3049 | 157 | 60.1 | Plus |
Stalker | 7256 | Stalker STALKER 7256bp | 6513..6653 | 2903..3049 | 153 | 60.1 | Plus |
gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 555..663 | 2789..2893 | 148 | 62.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2482..2543 | 126..188 | 132 | 69.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6946 | 146..378 | 128 | 54.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1521..1587 | 117..180 | 120 | 68.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 5298746..5298850 | 1..105 | 100 | -> | Plus |
chr2L | 5306664..5306683 | 106..125 | 100 | == | Plus |
chr2L | 5306774..5307011 | 216..453 | 100 | -> | Plus |
chr2L | 5307120..5307847 | 454..1181 | 100 | == | Plus |
chr2L | 5307936..5309535 | 1270..2869 | 99 | == | Plus |
chr2L | 5309595..5309724 | 2929..3058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vri-RD | 143..2190 | 106..2153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vri-RD | 143..2190 | 106..2153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vri-RA | 143..2190 | 106..2153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vri-RA | 143..2190 | 106..2153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vri-RA | 143..2190 | 106..2153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vri-RC | 1..3058 | 1..3058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vri-RC | 1..3058 | 1..3058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vri-RC | 1..3058 | 1..3058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vri-RC | 1..3058 | 1..3058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vri-RC | 1..3058 | 1..3058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5299647..5299751 | 1..105 | 100 | -> | Plus |
2L | 5307565..5307912 | 106..453 | 100 | -> | Plus |
2L | 5308021..5310625 | 454..3058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5299647..5299751 | 1..105 | 100 | -> | Plus |
2L | 5307565..5307912 | 106..453 | 100 | -> | Plus |
2L | 5308021..5310625 | 454..3058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5299647..5299751 | 1..105 | 100 | -> | Plus |
2L | 5307565..5307912 | 106..453 | 100 | -> | Plus |
2L | 5308021..5310625 | 454..3058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 5299647..5299751 | 1..105 | 100 | -> | Plus |
arm_2L | 5307565..5307912 | 106..453 | 100 | -> | Plus |
arm_2L | 5308021..5310625 | 454..3058 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5299647..5299751 | 1..105 | 100 | -> | Plus |
2L | 5307565..5307912 | 106..453 | 100 | -> | Plus |
2L | 5308021..5310625 | 454..3058 | 99 | Plus |
Translation from 320 to 2152
> FI01009.pep MPEVLSGTPTNSHNKANIAMMNNVRLSNISPTLSMNGSSNEASNLHPLSM YGGSISPQSNDSGMSDSLGKYVPGSGYGDGMMAQSPSQGGNGPQSALTAA QKELFSQRKQREFTPDNKKDESYWDRRRRNNEAAKRSREKRRYNDMVLEQ RVIELTKENHVLKAQLDAIRDKFNISGENLVSVEKILASLPTSEQVLSNT KRAKMSGSGGSSSGSSPSGSGSGEGSPQGGHNGYPVGPPLSPLIYGPNGN ARPEATVKSVHHIHHAGVAPPPTHLQQLVVPQSQTQHLYQPQPQQHQPHQ QQQISQPPQQQQQQQEPSPSAGSSSPVISDPHNRPPSTTIANLQVQLQQA LNRNVRPEDLDSLRKVVAAGALYNAAAVVGAPPPPPSAGLYVPAPSAYKD HLEAAAAWSHNVEAAVSSSAVDAVSSSSVSGSAASVLNLSRRACSPSYEH MLSSTTSSTLSSASSSGAVSGDDEQEHEPAHMAPLQLQRSSPQQGSDANN CLPLKLRHKSHLGDKDAAATALLSLQHIKQEPNCSRASPPAWNDGGDNSS DERDSGISIASAEWTAQLQRKLLAPKEANVVTSAERDQMLKSQLERLESE VASIKMILAE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14387-PA | 733 | GF14387-PA | 124..733 | 1..610 | 2172 | 81.7 | Plus |
Dana\GF12658-PA | 197 | GF12658-PA | 110..175 | 108..173 | 148 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25066-PA | 723 | GG25066-PA | 120..723 | 1..610 | 3060 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13383-PA | 844 | GH13383-PA | 112..414 | 1..263 | 833 | 63.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
vri-PF | 729 | CG14029-PF | 120..729 | 1..610 | 3125 | 100 | Plus |
vri-PE | 610 | CG14029-PE | 1..610 | 1..610 | 3125 | 100 | Plus |
vri-PD | 729 | CG14029-PD | 120..729 | 1..610 | 3125 | 100 | Plus |
vri-PA | 729 | CG14029-PA | 120..729 | 1..610 | 3125 | 100 | Plus |
vri-PC | 610 | CG14029-PC | 1..610 | 1..610 | 3125 | 100 | Plus |
CG14478-PD | 512 | CG14478-PD | 6..279 | 175..470 | 161 | 24.5 | Plus |
CG14478-PC | 512 | CG14478-PC | 6..279 | 175..470 | 161 | 24.5 | Plus |
CG14478-PB | 512 | CG14478-PB | 6..279 | 175..470 | 161 | 24.5 | Plus |
CG14478-PA | 512 | CG14478-PA | 6..279 | 175..470 | 161 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17625-PA | 814 | GI17625-PA | 141..814 | 1..610 | 1692 | 63 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19569-PA | 753 | GL19569-PA | 124..753 | 1..610 | 2054 | 75 | Plus |
Dper\GL11555-PA | 217 | GL11555-PA | 130..195 | 108..173 | 148 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12711-PA | 757 | GA12711-PA | 124..757 | 1..610 | 2025 | 74.9 | Plus |
Dpse\GA20586-PA | 219 | GA20586-PA | 132..197 | 108..173 | 148 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18545-PA | 728 | GM18545-PA | 120..728 | 1..610 | 3138 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23334-PA | 728 | GD23334-PA | 120..728 | 1..610 | 3142 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17539-PA | 775 | GJ17539-PA | 126..775 | 1..610 | 1762 | 64.3 | Plus |
Dvir\GJ21676-PA | 192 | GJ21676-PA | 106..171 | 108..173 | 147 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24157-PA | 761 | GK24157-PA | 117..761 | 1..610 | 1877 | 67.2 | Plus |
Dwil\GK20980-PA | 196 | GK20980-PA | 109..174 | 108..173 | 153 | 43.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25380-PA | 730 | GE25380-PA | 120..730 | 1..610 | 3118 | 97.7 | Plus |
Translation from 320 to 2152
> FI01009.hyp MPEVLSGTPTNSHNKANIAMMNNVRLSNISPTLSMNGSSNEASNLHPLSM YGGSISPQSNDSGMSDSLGKYVPGSGYGDGMMAQSPSQGGNGPQSALTAA QKELFSQRKQREFTPDNKKDESYWDRRRRNNEAAKRSREKRRYNDMVLEQ RVIELTKENHVLKAQLDAIRDKFNISGENLVSVEKILASLPTSEQVLSNT KRAKMSGSGGSSSGSSPSGSGSGEGSPQGGHNGYPVGPPLSPLIYGPNGN ARPEATVKSVHHIHHAGVAPPPTHLQQLVVPQSQTQHLYQPQPQQHQPHQ QQQISQPPQQQQQQQEPSPSAGSSSPVISDPHNRPPSTTIANLQVQLQQA LNRNVRPEDLDSLRKVVAAGALYNAAAVVGAPPPPPSAGLYVPAPSAYKD HLEAAAAWSHNVEAAVSSSAVDAVSSSSVSGSAASVLNLSRRACSPSYEH MLSSTTSSTLSSASSSGAVSGDDEQEHEPAHMAPLQLQRSSPQQGSDANN CLPLKLRHKSHLGDKDAAATALLSLQHIKQEPNCSRASPPAWNDGGDNSS DERDSGISIASAEWTAQLQRKLLAPKEANVVTSAERDQMLKSQLERLESE VASIKMILAE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
vri-PF | 729 | CG14029-PF | 120..729 | 1..610 | 3125 | 100 | Plus |
vri-PE | 610 | CG14029-PE | 1..610 | 1..610 | 3125 | 100 | Plus |
vri-PD | 729 | CG14029-PD | 120..729 | 1..610 | 3125 | 100 | Plus |
vri-PA | 729 | CG14029-PA | 120..729 | 1..610 | 3125 | 100 | Plus |
vri-PC | 610 | CG14029-PC | 1..610 | 1..610 | 3125 | 100 | Plus |