BDGP Sequence Production Resources |
Search the DGRC for FI01020
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 10 |
Well: | 20 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CYLD-RD |
Protein status: | FI01020.pep: gold |
Sequenced Size: | 2068 |
Gene | Date | Evidence |
---|---|---|
CYLD | 2008-04-29 | Release 5.5 accounting |
CYLD | 2008-08-15 | Release 5.9 accounting |
CYLD | 2008-12-18 | 5.12 accounting |
2068 bp (2068 high quality bases) assembled on 2006-09-12
GenBank Submission: BT025222
> FI01020.complete ATTCTAAAAGACACAAATTTTATAAATACTAAACAAAAATCCAGGATATA AACACCTTTTTATTTCCTTTAGTTGGAAATAATGAATTCCAAATCCGATT ATGAAGCAGAAAAAGAAAAAAAGCTGACCATAACAAATAGATTCGGGGAC TCCCTGGAAAACTATGAACTATCCAACGAGAGCGAGCACAAGACCCATGT ATACCCGAAAAAGATTCCTAACAGAAAAAACGGAATTTTAAAAAACACCG ATGCCAACCATAGTGCCGTCGATAATCAACATCTTGAGGATGTGGATTTG GCAGACATTTTGGGCACAAATTGGCCAAAACGAGCGGGACCAGCTGCAAT GATCTTAAACAACAAAAGTAAAACGGATCCTAGTAATTCTGTAGACTTAA TTTTAAAACCAGCCTCACCCATATTAAAAATAGAGCCGGAGGAACCTTTA CGTTTTACAATCGCTGATTATCAACCTCTGATTGAAATACCTGGAACCGA GCTAGCGATTGGTTCCCTCGTCGAAGTCTCGAATCCTGGAGTATGTGAAG ATCTATATGGCGTTGTGAGATGGATAGGTATACCGCCTGGCCCGCAAAAA AACGTACTCGTCGGAATCGAGGTAGAAGACGAATCCAACTTGAAAAATGT AGTGGCATCGGATGGGAGACACAATGGCGTACGCTTATTTACTTGCCATG ATGGTCGAGCTATTTTTGTACCAGCCAACAGATGCACCGCTGACCGGCGA TTTGCTGATGTAGATAATAGCATTTCTGCAAACAGAGTTTCTAGTAATCA CGCAAAGAAATTTGGCGTCGCTGACTGTCCTGCCATATATGGCTCGATAC CACCATTACAAATACACAATTCCGATGAGCTTGCTAGCATATGTGGAAAG TTCAAAGGAATACAAGGACACCATAATTCCTGCTACCTTGATGCAACTCT ATTTTCCATGTTCACTTTCACCAGTGTTTTCGATTCAATTCTGTACAGAC GTCCGGGCCCACAAGATATTCGAAATTACAGTGAGGTTCAAAAGGTTCTG CGCGATGAGATCGTCAATCCATTGCGAAAAAACGTTTTCGTTCGATCCGA TCGTGTGATGAAACTGCGCGAGCTCCTAGATCAGCTAAGTTCGGTCAGCG GTCTCACCTGCGAGGAAAAGGATCCTGAAGAGTTCCTAAATAGTTTGCTC TCACAAATAATGCGAGTTGAACCGTTTCTAAAGCTAAGCTCGGGGCAAGA TTCTTATTTTTACCAACTCTTTGTGGAGAAGGATGAGAAGTTAACATTAC CGAGTGTGCAACAATTGTTTGAGCAAAGCTTTCACTCATCGGATATAAAA CTAAAGGAGGTTCCTTCTTGTTTCATCATTCAAATGCCTCGTTTCGGAAA GAACTACAAGATGTATCCAAGGATATTGCCATCGCAGGTTCTTGATGTCA CAGACATAATTGAAAATTCTCCTCGACAGTGCTCACTTTGTGGCAAACTA GCTGAATACGAGTGCCGGGATTGCTTTGGCAGCTTGCAGGCTGGATCAGG ACTGGAATGCACCGCCTTTTGTCCAAAATGTCTCAAGACATTTCACAGTC ACATCAAAAGAACGAATCATGTGTCGAAGAAGATTTATAGTCCGAAGGAA TTTAAAATCATGGCCGAGCACATGGTTGTCCCGCGATTGTACATGGAGTT ATTTGCAGTCGTTTGCATAGAAACATCTCACTACGTGGCATTTGTCAAGT CTGGATCCGGACCAGATGCTCCATGGTGTTTCTTCGATTCAATGGCTGAT CGAAAAGGCGAACAGAATGGATACAATATACCTGAAATTACGTGTGTTCC AGAATTAACACAGTGGCTCTCGGAAGAAGGCGCACGATCTATAAATGAAA CTTCAACGAACGATAAAGTATTACCTGAACACGCCAAGCGTATTTTTTGC GATGCCTATATGTGTCTGTACCAAAGCACAGATATAATGATGTACCATTA GAGCAAATTTATCAATAAATTAAATGAATGCAATAAAATTTTTGTAAAAA TCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CYLD-RE | 2090 | CYLD-RE | 19..2071 | 1..2053 | 10265 | 100 | Plus |
CYLD-RD | 2084 | CYLD-RD | 81..2069 | 65..2053 | 9945 | 100 | Plus |
CYLD-RC | 2021 | CYLD-RC | 67..2010 | 110..2053 | 9720 | 100 | Plus |
CYLD-RD | 2084 | CYLD-RD | 2..66 | 1..65 | 325 | 100 | Plus |
CYLD-RC | 2021 | CYLD-RC | 2..66 | 1..65 | 325 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10294723..10294969 | 2052..1806 | 1235 | 100 | Minus |
chr2L | 23010047 | chr2L | 10295482..10295718 | 1468..1232 | 1185 | 100 | Minus |
chr2L | 23010047 | chr2L | 10296562..10296793 | 683..452 | 1160 | 100 | Minus |
chr2L | 23010047 | chr2L | 10295795..10296017 | 1233..1011 | 1100 | 99.6 | Minus |
chr2L | 23010047 | chr2L | 10297636..10297854 | 453..235 | 1065 | 99.1 | Minus |
chr2L | 23010047 | chr2L | 10295027..10295227 | 1809..1609 | 1005 | 100 | Minus |
chr2L | 23010047 | chr2L | 10296288..10296464 | 859..683 | 885 | 100 | Minus |
chr2L | 23010047 | chr2L | 10297901..10298077 | 242..66 | 885 | 100 | Minus |
chr2L | 23010047 | chr2L | 10296072..10296227 | 1015..860 | 780 | 100 | Minus |
chr2L | 23010047 | chr2L | 10295281..10295422 | 1610..1469 | 710 | 100 | Minus |
chr2L | 23010047 | chr2L | 10298619..10298683 | 65..1 | 325 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10295865..10296112 | 2053..1806 | 1240 | 100 | Minus |
2L | 23513712 | 2L | 10296625..10296861 | 1468..1232 | 1185 | 100 | Minus |
2L | 23513712 | 2L | 10297705..10297936 | 683..452 | 1160 | 100 | Minus |
2L | 23513712 | 2L | 10296938..10297160 | 1233..1011 | 1100 | 99.6 | Minus |
2L | 23513712 | 2L | 10298779..10298997 | 453..235 | 1065 | 99.1 | Minus |
2L | 23513712 | 2L | 10296170..10296370 | 1809..1609 | 1005 | 100 | Minus |
2L | 23513712 | 2L | 10297431..10297607 | 859..683 | 885 | 100 | Minus |
2L | 23513712 | 2L | 10299044..10299220 | 242..66 | 885 | 100 | Minus |
2L | 23513712 | 2L | 10297215..10297370 | 1015..860 | 780 | 100 | Minus |
2L | 23513712 | 2L | 10296424..10296565 | 1610..1469 | 710 | 100 | Minus |
2L | 23513712 | 2L | 10299762..10299826 | 65..1 | 325 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10295865..10296112 | 2053..1806 | 1240 | 100 | Minus |
2L | 23513712 | 2L | 10296625..10296861 | 1468..1232 | 1185 | 100 | Minus |
2L | 23513712 | 2L | 10297705..10297936 | 683..452 | 1160 | 100 | Minus |
2L | 23513712 | 2L | 10296938..10297160 | 1233..1011 | 1100 | 99.5 | Minus |
2L | 23513712 | 2L | 10298779..10298997 | 453..235 | 1065 | 99 | Minus |
2L | 23513712 | 2L | 10296170..10296370 | 1809..1609 | 1005 | 100 | Minus |
2L | 23513712 | 2L | 10299044..10299220 | 242..66 | 885 | 100 | Minus |
2L | 23513712 | 2L | 10297431..10297607 | 859..683 | 885 | 100 | Minus |
2L | 23513712 | 2L | 10297215..10297370 | 1015..860 | 780 | 100 | Minus |
2L | 23513712 | 2L | 10296424..10296565 | 1610..1469 | 710 | 100 | Minus |
2L | 23513712 | 2L | 10299762..10299826 | 65..1 | 325 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbif\P-element_O | 2986 | Dbif\P-element_O P_O 2986bp Derived from X71634. | 2700..2798 | 23..119 | 129 | 64.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10296288..10296463 | 684..859 | 100 | <- | Minus |
chr2L | 10296073..10296227 | 860..1014 | 100 | <- | Minus |
chr2L | 10294723..10294967 | 1808..2052 | 100 | <- | Minus |
chr2L | 10295029..10295225 | 1611..1807 | 100 | <- | Minus |
chr2L | 10295281..10295422 | 1469..1610 | 100 | <- | Minus |
chr2L | 10295482..10295716 | 1234..1468 | 100 | <- | Minus |
chr2L | 10295795..10296013 | 1015..1233 | 100 | <- | Minus |
chr2L | 10296562..10296793 | 452..683 | 100 | <- | Minus |
chr2L | 10297638..10297846 | 243..451 | 100 | <- | Minus |
chr2L | 10297901..10298077 | 66..242 | 100 | <- | Minus |
chr2L | 10298619..10298683 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CYLD-RE | 1..1920 | 82..2001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CYLD-RE | 1..1920 | 82..2001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CYLD-RD | 1..1920 | 82..2001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CYLD-RE | 1..1920 | 82..2001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CYLD-RD | 1..1920 | 82..2001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CYLD-RE | 2..2053 | 1..2052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CYLD-RE | 2..2053 | 1..2052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CYLD-RE | 22..2073 | 1..2052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CYLD-RE | 2..2053 | 1..2052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CYLD-RE | 22..2073 | 1..2052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10297216..10297370 | 860..1014 | 100 | <- | Minus |
2L | 10296625..10296859 | 1234..1468 | 100 | <- | Minus |
2L | 10296938..10297156 | 1015..1233 | 100 | <- | Minus |
2L | 10296172..10296368 | 1611..1807 | 100 | <- | Minus |
2L | 10296424..10296565 | 1469..1610 | 100 | <- | Minus |
2L | 10295866..10296110 | 1808..2052 | 100 | <- | Minus |
2L | 10297431..10297606 | 684..859 | 100 | <- | Minus |
2L | 10297705..10297936 | 452..683 | 100 | <- | Minus |
2L | 10298781..10298989 | 243..451 | 100 | <- | Minus |
2L | 10299044..10299220 | 66..242 | 100 | <- | Minus |
2L | 10299762..10299826 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10297216..10297370 | 860..1014 | 100 | <- | Minus |
2L | 10296625..10296859 | 1234..1468 | 100 | <- | Minus |
2L | 10296938..10297156 | 1015..1233 | 100 | <- | Minus |
2L | 10296172..10296368 | 1611..1807 | 100 | <- | Minus |
2L | 10296424..10296565 | 1469..1610 | 100 | <- | Minus |
2L | 10295866..10296110 | 1808..2052 | 100 | <- | Minus |
2L | 10297431..10297606 | 684..859 | 100 | <- | Minus |
2L | 10297705..10297936 | 452..683 | 100 | <- | Minus |
2L | 10298781..10298989 | 243..451 | 100 | <- | Minus |
2L | 10299044..10299220 | 66..242 | 100 | <- | Minus |
2L | 10299762..10299826 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10297216..10297370 | 860..1014 | 100 | <- | Minus |
2L | 10296625..10296859 | 1234..1468 | 100 | <- | Minus |
2L | 10296938..10297156 | 1015..1233 | 100 | <- | Minus |
2L | 10296172..10296368 | 1611..1807 | 100 | <- | Minus |
2L | 10296424..10296565 | 1469..1610 | 100 | <- | Minus |
2L | 10295866..10296110 | 1808..2052 | 100 | <- | Minus |
2L | 10297431..10297606 | 684..859 | 100 | <- | Minus |
2L | 10297705..10297936 | 452..683 | 100 | <- | Minus |
2L | 10298781..10298989 | 243..451 | 100 | <- | Minus |
2L | 10299044..10299220 | 66..242 | 100 | <- | Minus |
2L | 10299762..10299826 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10297431..10297606 | 684..859 | 100 | <- | Minus |
arm_2L | 10296625..10296859 | 1234..1468 | 100 | <- | Minus |
arm_2L | 10296938..10297156 | 1015..1233 | 100 | <- | Minus |
arm_2L | 10295866..10296110 | 1808..2052 | 100 | <- | Minus |
arm_2L | 10296172..10296368 | 1611..1807 | 100 | <- | Minus |
arm_2L | 10296424..10296565 | 1469..1610 | 100 | <- | Minus |
arm_2L | 10297216..10297370 | 860..1014 | 100 | <- | Minus |
arm_2L | 10297705..10297936 | 452..683 | 100 | <- | Minus |
arm_2L | 10298781..10298989 | 243..451 | 100 | <- | Minus |
arm_2L | 10299044..10299220 | 66..242 | 100 | <- | Minus |
arm_2L | 10299762..10299826 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10299044..10299220 | 66..242 | 100 | <- | Minus |
2L | 10299762..10299826 | 1..65 | 100 | Minus | |
2L | 10295866..10296110 | 1808..2052 | 100 | <- | Minus |
2L | 10296172..10296368 | 1611..1807 | 100 | <- | Minus |
2L | 10296424..10296565 | 1469..1610 | 100 | <- | Minus |
2L | 10296625..10296859 | 1234..1468 | 100 | <- | Minus |
2L | 10296938..10297156 | 1015..1233 | 100 | <- | Minus |
2L | 10297216..10297370 | 860..1014 | 100 | <- | Minus |
2L | 10297431..10297606 | 684..859 | 100 | <- | Minus |
2L | 10297705..10297936 | 452..683 | 100 | <- | Minus |
2L | 10298781..10298989 | 243..451 | 100 | <- | Minus |
Translation from 81 to 2000
> FI01020.hyp MNSKSDYEAEKEKKLTITNRFGDSLENYELSNESEHKTHVYPKKIPNRKN GILKNTDANHSAVDNQHLEDVDLADILGTNWPKRAGPAAMILNNKSKTDP SNSVDLILKPASPILKIEPEEPLRFTIADYQPLIEIPGTELAIGSLVEVS NPGVCEDLYGVVRWIGIPPGPQKNVLVGIEVEDESNLKNVVASDGRHNGV RLFTCHDGRAIFVPANRCTADRRFADVDNSISANRVSSNHAKKFGVADCP AIYGSIPPLQIHNSDELASICGKFKGIQGHHNSCYLDATLFSMFTFTSVF DSILYRRPGPQDIRNYSEVQKVLRDEIVNPLRKNVFVRSDRVMKLRELLD QLSSVSGLTCEEKDPEEFLNSLLSQIMRVEPFLKLSSGQDSYFYQLFVEK DEKLTLPSVQQLFEQSFHSSDIKLKEVPSCFIIQMPRFGKNYKMYPRILP SQVLDVTDIIENSPRQCSLCGKLAEYECRDCFGSLQAGSGLECTAFCPKC LKTFHSHIKRTNHVSKKIYSPKEFKIMAEHMVVPRLYMELFAVVCIETSH YVAFVKSGSGPDAPWCFFDSMADRKGEQNGYNIPEITCVPELTQWLSEEG ARSINETSTNDKVLPEHAKRIFCDAYMCLYQSTDIMMYH*
Translation from 81 to 2000
> FI01020.pep MNSKSDYEAEKEKKLTITNRFGDSLENYELSNESEHKTHVYPKKIPNRKN GILKNTDANHSAVDNQHLEDVDLADILGTNWPKRAGPAAMILNNKSKTDP SNSVDLILKPASPILKIEPEEPLRFTIADYQPLIEIPGTELAIGSLVEVS NPGVCEDLYGVVRWIGIPPGPQKNVLVGIEVEDESNLKNVVASDGRHNGV RLFTCHDGRAIFVPANRCTADRRFADVDNSISANRVSSNHAKKFGVADCP AIYGSIPPLQIHNSDELASICGKFKGIQGHHNSCYLDATLFSMFTFTSVF DSILYRRPGPQDIRNYSEVQKVLRDEIVNPLRKNVFVRSDRVMKLRELLD QLSSVSGLTCEEKDPEEFLNSLLSQIMRVEPFLKLSSGQDSYFYQLFVEK DEKLTLPSVQQLFEQSFHSSDIKLKEVPSCFIIQMPRFGKNYKMYPRILP SQVLDVTDIIENSPRQCSLCGKLAEYECRDCFGSLQAGSGLECTAFCPKC LKTFHSHIKRTNHVSKKIYSPKEFKIMAEHMVVPRLYMELFAVVCIETSH YVAFVKSGSGPDAPWCFFDSMADRKGEQNGYNIPEITCVPELTQWLSEEG ARSINETSTNDKVLPEHAKRIFCDAYMCLYQSTDIMMYH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14119-PA | 642 | GF14119-PA | 1..642 | 1..639 | 2872 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23954-PA | 640 | GG23954-PA | 1..640 | 1..639 | 3354 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13356-PA | 618 | GH13356-PA | 13..618 | 49..639 | 2291 | 71.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CYLD-PE | 639 | CG5603-PE | 1..639 | 1..639 | 3380 | 100 | Plus |
CYLD-PD | 639 | CG5603-PD | 1..639 | 1..639 | 3380 | 100 | Plus |
CYLD-PB | 551 | CG5603-PB | 10..551 | 96..639 | 2746 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18982-PA | 551 | GL18982-PA | 1..551 | 90..639 | 2379 | 79.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27711-PA | 520 | GA27711-PA | 5..520 | 126..639 | 2344 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11823-PA | 639 | GM11823-PA | 1..639 | 1..639 | 3411 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22283-PA | 639 | GD22283-PA | 1..639 | 1..639 | 3411 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17519-PA | 679 | GJ17519-PA | 19..679 | 5..639 | 2236 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18789-PA | 577 | GK18789-PA | 1..577 | 63..639 | 2211 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26174-PA | 640 | GE26174-PA | 1..640 | 1..639 | 3371 | 97.5 | Plus |