Clone FI01021 Report

Search the DGRC for FI01021

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:10
Well:21
Vector:pFlc-1
Associated Gene/TranscriptCrebA-RA
Protein status:FI01021.pep: gold
Sequenced Size:3201

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CrebA 2008-04-29 Release 5.5 accounting
CrebA 2008-08-15 Release 5.9 accounting
CrebA 2008-12-18 5.12 accounting

Clone Sequence Records

FI01021.complete Sequence

3201 bp (3201 high quality bases) assembled on 2006-09-22

GenBank Submission: BT025219

> FI01021.complete
ACAAGAATTTCACCGACATTTAGTTTAGTACCGTTTTTGGCTGCAGTCGC
ACTACGGACAGTTTATTCTAATTGTGTGCTACCATCCCATACATCCAAAC
ATACAAATATTATTGCTAAAGTTAACGATATTAACTACACATATTAAATG
CTATTATACACGGGCCGAGCAAAGCCATTTCTAAAGCGGTTTACTGCCCA
TTCACACACAAAACACATCAAAAAATTCAATTAAATCAATTGAAATCGTA
ATCGAGTCCAAAACACAGTACAGCGAAAAGAAAAATCAAATAAACTAAAA
TTATATGGTTATCAACGTTGAATCTAAACATACATATAATAACTATTTTC
TATGAAAATCGAGTGTTTCGTTTCCGAATCGGGAAAAAAGTTAATAATTC
AATTAATGTTAACGCCAAATATAATCCGACGAGAAAAGCGCATGCAACAA
GTTAAATCCAGCCGACAGTTGTAAACCAAGTTAGATCCGTACACAGATAC
ACCCCAAATACCACAACCAATACGAATGAATGCCCGGTATACACATACAA
ACGAAAAAGTCACACACACACACACACACGCAGACTATAACAATGTCAAG
TGAAAACATTCTCTGGAAGCAACAGGTTTCCCCTTAATAAGTGTTATAAA
GAAGCAACCAACAGTCATCACCCAGAACTGTTCTTTACGGAAAAAAAGTA
AAGTAAAAAATAAAAGAGAAAGAGAGGTAGAAGAGCGCACGAGGAATAAA
GAAGATAAAGTATAAAGAAAGAGAAAGAGCGGAGAAAGAGCCACTTTTCA
GTCAGCAAAATCGTATAAAAATAATAGTATAATACCATAAACTACAAAAA
TTATAAGAAGACAGTTCTTAAGTGGGTTAAAGTAGAAAAATTAGTGTGAC
TGCAACCGAGTGGAACCGAATTAAACCATACCACACCATCCCCGAACCGC
AATAAAAAAAAAACAACTAAAAGAGTTCTTAGAGCGCATCTGACTAGCGC
CAACCATGGAATTCTACGATGGCGACCTCAAAGATATATGGGACTCCGAC
TTAGATCCGGAATCCTTGAAAATCAGCCCCGATCACGATATGCACGACTG
GCTGTTCGATCGGGACGTCAAAGATCCCACCGTCATACTCAACGACAAGC
TCATCTCGGATGCCCTGCTCAATGGCACACAGCCGATCAAGACGGAGCAC
TCCTACAGTCTCAGCAGCGACGTTGACTCCCTGCCCGATTCACCAAAAAG
CCTCCAGGCCAAGATCGAGGACATGGACGACGAGTGCTTTCCCGCCATTT
CACCGAAGACGGCGACCAATGGGCGCGTGACCATCGATCCCAAGTACCTC
ACCTTCCACGTCCCGCCCACGCACGCCACGCCCATCAGCCGGCTGAGCAG
CAATCCCGCCCTAAACACCTCCGTCGCGGATCTAACACGATCCTCCGGCC
TGCAGAGCCTGCAGGCGCACCAGCCACACCACGGATCCGGCTCGAGCCAC
GTGGTGGTGGCCAATCTGGAGCACTTTCAACTACCTCAGCACCTATACGA
CAACGACTGCAGCTCCTCGGTGTCGTCGTTGCGGGATGGCAGCATGTCGC
CGGACATTTGCTCCGACATCGAGATCGACGAGTCGGCCATCAAGGATGAG
CCCATGTCGCCGGACTCCAGCTGCCCCGCCAGTCCCACTTCTCAAGCGAG
CAGCTCGCAGCACCAGCTCAGCCTTAATCTGGCCCACCTGCAGTCGGAAA
TGCTATTCGAGCCAAAGCACTGTGGCCTCCTGCTAACCGCCAGCAGCAAC
AGCAACAACAGCCTCATAAAGTCCCAGCAGCGCCAGCAGCAAATCCTTGG
CCAGGACAATCTACTGATGGCCAAAATGGAGATCAAGAGCGAGAAACAGA
GCACCAGCAATAGCTCGGACAAATCGCATGCCCACGGCTATGGAATCCCG
CTGACGCCACCATCCTCCCTGCCCAGCGATGATTCCGAAGGTAACTTAAG
TCCGGAACACCTGTTTGCGCCACTGTCGCCCAACGCAACCGTTTCCATCT
CTGTGGCCAATCCAGCCGGCGGTGAGTCATCCGTACGGGTCAGCCGCACC
GCTGCCAGCATCACACGCTCGTCCTCCGGATCCGCATCAGCATCCGGCTC
CAGTACCAGCTCAACGGTTACCACGACACGGCAGCCGATCCACACGCCGC
TGATTAGCTCGCAACCGAAGGGCTCCACTGGGACGCTGTTGCTGACGGAA
GAGGAGAAACGCACTTTGCTGGCCGAAGGGTATCCGATTCCGCAGAAGCT
ACCCCTAACCAAAGCCGAGGAGAAATCGCTGAAGAAGATTCGACGCAAAA
TCAAGAATAAAATCTCTGCTCAGGAAAGCCGCCGCAAGAAGAAGGAGTAC
ATGGACCAGCTGGAGAGGCGCGTCGAGATCCTGGTCACCGAAAACCATGA
CTACAAGAAGCGCCTCGAGGGGCTGGAGGAGACCAATGCCAATCTACTTA
GTCAGCTGCACAAACTGCAGGCCCTAGTTAGCAAGCACAATGTGAAAAAG
TCCTAAACAACCGGATTCACATGGACCCCTCGATATCCTAGGGGGCTTGT
GTAGCCGGAATCGTTTCTTGTTTGCCCGCCTTCCCGAGTTTTATATTTTA
GATCTATTATTTGTATGTCAGTTGAGTTCAGTTCATTTCAGTTTAGTTTT
TTGTTTCGATTTAATCAGTCTGGGAGTTTGTGAAGAATTTATGCGACGAG
GAAACTTTAATGAATTTTTTGTTCGGCTTTTGGATAGCCACAAAGCGGTA
TAACATTCCCCTCAATCCTGCTCCACCGCACCACCATAATAAATATTCCA
CAGGGCCGAGATGACCAGAATGCCCATAACTAATATCGTATAAATAATAT
GTGTATGTAATCCTAGCTACTTGTAGGGCCTATATTATAAAGCTATGTAT
ATTAGTCATGCATTCCTGTTATATAAACTTGATCTAGCTTAGGCAAATGA
CCAGCTGCAGCAACAACCACAATTACAATTACAATTACAAATACGAGAAG
CTCAAATGCAGAAGCCAGAAATCCAGAAAGCGTCTAAAGAGAAGCTAAAT
AATAATATTGTAATTAAACGAAATCAACAGACCAAAAACAAAAACGTAAA
AAAACAGCAAAGTAATGAAAAAGTTAACGACAACAACAAAAAAAAAAAAA
A

FI01021.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:43:15
Subject Length Description Subject Range Query Range Score Percent Strand
CrebA.b 4656 CrebA.b 121..3319 1..3199 15995 100 Plus
CrebA.a 4289 CrebA.a 121..3319 1..3199 15995 100 Plus
CrebA.c 4621 CrebA.c 121..3319 1..3199 15995 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:01:50
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 15525328..15526387 1..1060 5300 100 Plus
chr3L 24539361 chr3L 15541005..15541830 2362..3187 4115 99.9 Plus
chr3L 24539361 chr3L 15539474..15539971 1270..1767 2475 99.8 Plus
chr3L 24539361 chr3L 15540070..15540521 1766..2217 2215 99.3 Plus
chr3L 24539361 chr3L 15537819..15538030 1059..1270 1060 100 Plus
chr3L 24539361 chr3L 15540788..15540932 2217..2361 725 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:04:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:01:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15535397..15536456 1..1060 5300 100 Plus
3L 28110227 3L 15551080..15551917 2362..3199 4190 100 Plus
3L 28110227 3L 15549548..15550045 1270..1767 2490 100 Plus
3L 28110227 3L 15550145..15550596 1766..2217 2260 100 Plus
3L 28110227 3L 15547875..15548086 1059..1270 1060 100 Plus
3L 28110227 3L 15550863..15551007 2217..2361 725 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:40:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 15528497..15529556 1..1060 5300 100 Plus
3L 28103327 3L 15544180..15545017 2362..3199 4190 100 Plus
3L 28103327 3L 15542648..15543145 1270..1767 2490 100 Plus
3L 28103327 3L 15543245..15543696 1766..2217 2260 100 Plus
3L 28103327 3L 15540975..15541186 1059..1270 1060 100 Plus
3L 28103327 3L 15543963..15544107 2217..2361 725 100 Plus
Blast to na_te.dros performed 2019-03-16 04:01:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6737..6876 1791..1928 163 61.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6779..6946 1791..1959 157 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6721..6848 1790..1914 155 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6866..7019 1781..1935 152 60 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6692..6926 1671..1917 151 59.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2808..2926 1791..1921 148 64.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2374 1791..1841 144 78.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6758..6878 1791..1914 144 61.9 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3240..3359 1738..1853 141 63.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2379..2508 1791..1914 139 60.8 Plus
roo 9092 roo DM_ROO 9092bp 1059..1114 1786..1842 129 71.9 Plus
Dkoe\Gandalf 979 Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). 763..900 2637..2768 126 58 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1534..1590 1786..1843 125 70.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2358..2472 1791..1914 123 58.9 Plus
mdg3 5519 mdg3 DMMDG3 5519bp Derived from X95908 (e990667) (Rel. 49, Last updated, Version 3). 65..137 57..128 118 67.6 Plus
mdg3 5519 mdg3 DMMDG3 5519bp Derived from X95908 (e990667) (Rel. 49, Last updated, Version 3). 5317..5389 57..128 118 67.6 Plus
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 679..801 214..345 117 60.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2454..2506 1791..1841 116 71.7 Plus

FI01021.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:03:03 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 15537820..15538030 1060..1270 100 -> Plus
chr3L 15525328..15526016 1..689 100 == Plus
chr3L 15526117..15526386 790..1059 100 -> Plus
chr3L 15539475..15539971 1271..1767 99 -> Plus
chr3L 15540072..15540521 1768..2217 99 -> Plus
chr3L 15540789..15540932 2218..2361 100 -> Plus
chr3L 15541005..15541758 2362..3115 95 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:42:36 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
CrebA-RB 1..1551 1006..2556 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:20:03 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
CrebA-RB 1..1551 1006..2556 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:13:03 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
CrebA-RA 1..1551 1006..2556 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:45:22 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
CrebA-RB 1..1551 1006..2556 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:23:26 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
CrebA-RA 1..1551 1006..2556 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:42:35 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
CrebA-RB 1..3170 18..3187 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:20:03 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
CrebA-RB 1..3170 18..3187 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:13:03 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
CrebA-RA 3..3189 1..3187 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:45:23 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
CrebA-RB 1..3170 18..3187 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:23:26 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
CrebA-RA 3..3189 1..3187 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:03:03 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15535397..15536455 1..1059 100 -> Plus
3L 15547876..15548086 1060..1270 100 -> Plus
3L 15549549..15550045 1271..1767 100 -> Plus
3L 15550147..15550596 1768..2217 100 -> Plus
3L 15550864..15551007 2218..2361 100 -> Plus
3L 15551080..15551905 2362..3187 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:03:03 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15535397..15536455 1..1059 100 -> Plus
3L 15547876..15548086 1060..1270 100 -> Plus
3L 15549549..15550045 1271..1767 100 -> Plus
3L 15550147..15550596 1768..2217 100 -> Plus
3L 15550864..15551007 2218..2361 100 -> Plus
3L 15551080..15551905 2362..3187 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:03:03 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15535397..15536455 1..1059 100 -> Plus
3L 15547876..15548086 1060..1270 100 -> Plus
3L 15549549..15550045 1271..1767 100 -> Plus
3L 15550147..15550596 1768..2217 100 -> Plus
3L 15550864..15551007 2218..2361 100 -> Plus
3L 15551080..15551905 2362..3187 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:13:03 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15528497..15529555 1..1059 100 -> Plus
arm_3L 15540976..15541186 1060..1270 100 -> Plus
arm_3L 15542649..15543145 1271..1767 100 -> Plus
arm_3L 15543247..15543696 1768..2217 100 -> Plus
arm_3L 15543964..15544107 2218..2361 100 -> Plus
arm_3L 15544180..15545005 2362..3187 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:08:36 Download gff for FI01021.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15528497..15529555 1..1059 100 -> Plus
3L 15540976..15541186 1060..1270 100 -> Plus
3L 15542649..15543145 1271..1767 100 -> Plus
3L 15543247..15543696 1768..2217 100 -> Plus
3L 15543964..15544107 2218..2361 100 -> Plus
3L 15544180..15545005 2362..3187 100   Plus

FI01021.pep Sequence

Translation from 1005 to 2555

> FI01021.pep
MEFYDGDLKDIWDSDLDPESLKISPDHDMHDWLFDRDVKDPTVILNDKLI
SDALLNGTQPIKTEHSYSLSSDVDSLPDSPKSLQAKIEDMDDECFPAISP
KTATNGRVTIDPKYLTFHVPPTHATPISRLSSNPALNTSVADLTRSSGLQ
SLQAHQPHHGSGSSHVVVANLEHFQLPQHLYDNDCSSSVSSLRDGSMSPD
ICSDIEIDESAIKDEPMSPDSSCPASPTSQASSSQHQLSLNLAHLQSEML
FEPKHCGLLLTASSNSNNSLIKSQQRQQQILGQDNLLMAKMEIKSEKQST
SNSSDKSHAHGYGIPLTPPSSLPSDDSEGNLSPEHLFAPLSPNATVSISV
ANPAGGESSVRVSRTAASITRSSSGSASASGSSTSSTVTTTRQPIHTPLI
SSQPKGSTGTLLLTEEEKRTLLAEGYPIPQKLPLTKAEEKSLKKIRRKIK
NKISAQESRRKKKEYMDQLERRVEILVTENHDYKKRLEGLEETNANLLSQ
LHKLQALVSKHNVKKS*

FI01021.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:29:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10055-PA 531 GF10055-PA 1..531 1..516 2103 86 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:29:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15906-PA 516 GG15906-PA 1..516 1..516 2621 97.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:29:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14739-PA 526 GH14739-PA 4..526 3..516 1532 65.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:22:56
Subject Length Description Subject Range Query Range Score Percent Strand
CrebA-PB 516 CG7450-PB 1..516 1..516 2632 100 Plus
CrebA-PA 516 CG7450-PA 1..516 1..516 2632 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:29:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13117-PA 555 GI13117-PA 202..555 171..516 1128 73.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:29:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24866-PA 544 GL24866-PA 1..544 1..516 1817 76 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:29:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20362-PA 536 GA20362-PA 1..536 1..516 1809 77.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:29:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25536-PA 516 GM25536-PA 1..516 1..516 2666 98.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:29:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14552-PA 516 GD14552-PA 1..516 1..516 2621 97.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:29:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13865-PA 520 GJ13865-PA 4..520 3..516 1626 69.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:29:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10597-PA 528 GK10597-PA 1..528 1..516 1673 69.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:29:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22248-PA 516 GE22248-PA 1..516 1..516 2624 97.5 Plus

FI01021.hyp Sequence

Translation from 1005 to 2555

> FI01021.hyp
MEFYDGDLKDIWDSDLDPESLKISPDHDMHDWLFDRDVKDPTVILNDKLI
SDALLNGTQPIKTEHSYSLSSDVDSLPDSPKSLQAKIEDMDDECFPAISP
KTATNGRVTIDPKYLTFHVPPTHATPISRLSSNPALNTSVADLTRSSGLQ
SLQAHQPHHGSGSSHVVVANLEHFQLPQHLYDNDCSSSVSSLRDGSMSPD
ICSDIEIDESAIKDEPMSPDSSCPASPTSQASSSQHQLSLNLAHLQSEML
FEPKHCGLLLTASSNSNNSLIKSQQRQQQILGQDNLLMAKMEIKSEKQST
SNSSDKSHAHGYGIPLTPPSSLPSDDSEGNLSPEHLFAPLSPNATVSISV
ANPAGGESSVRVSRTAASITRSSSGSASASGSSTSSTVTTTRQPIHTPLI
SSQPKGSTGTLLLTEEEKRTLLAEGYPIPQKLPLTKAEEKSLKKIRRKIK
NKISAQESRRKKKEYMDQLERRVEILVTENHDYKKRLEGLEETNANLLSQ
LHKLQALVSKHNVKKS*

FI01021.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:28:59
Subject Length Description Subject Range Query Range Score Percent Strand
CrebA-PB 516 CG7450-PB 1..516 1..516 2632 100 Plus
CrebA-PA 516 CG7450-PA 1..516 1..516 2632 100 Plus