Clone FI01028 Report

Search the DGRC for FI01028

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:10
Well:28
Vector:pFlc-1
Associated Gene/TranscriptCG6885-RA
Protein status:FI01028.pep: gold
Sequenced Size:1221

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6885 2008-04-29 Release 5.5 accounting
CG6885 2008-08-15 Release 5.9 accounting
CG6885 2008-12-18 5.12 accounting

Clone Sequence Records

FI01028.complete Sequence

1221 bp (1221 high quality bases) assembled on 2006-09-12

GenBank Submission: BT025215

> FI01028.complete
AGATAGTTTTCAAGCATGGCCCGCCGAACACAATCGCGTTATATCTTTGA
CATCGAGGATAACTTCCGTGTGTTTCGCCACCAGTTTTTCGTCAACGGTG
CAAGGAGAGCGGATTGCACAACCTGTGAAAGTCGAGTGCCAGTCAGCGAA
CCATACCATCATCATTGGCGAAATGATATCGAGAACAATAGAAGCCATTG
CATTCAAATTGGTTCTGATGAAAAGGATATCCTGAAGAGGATCGAGGACC
AGGCCATCGAAGAGTTTATCTTGTGTGATGGAAGCATTGCGGCCAGGACC
AACGACTTTCTTCTGGATGCTGGGATGGATGCAGTTCCGCAACTGCTGCG
ATTTTTAAGTTTTGGTACAGAAAAATTGGAGACCACAGTTGGATTTTACG
TGGATGTGAAAAAGGAGCGAATGTACTACGAAAGCAGTCCGTTAAATATC
GAAAACCATTTCGATATTGGTGAGGCGGTGGACATGATATTCTCCATGCT
GCTGGAGAAGATCAGCAACTACGTGCTGCTCCATCAGAAGGTTCCACTGG
AGGCGTGTGTCATCAGAAGGATGAAGGTGACGGTCAAGAGATTTTGCGTC
TCGCCTAAGAGCAATTCTCTTAAACTTCCTTTGCAGTACCGAGTAAAAAA
CGCAACAGAAGTCATTGGAAATGGAAGTAATAAGCATTCCTCCGATTTAG
CACAACTTTCTGAAACTTATATAAACCAAAAGGACCAAAATCAACACATT
CCGGCAACTCTAAAAATAAACCTGTACACTTTTCGGGTCTGCAGCACTTC
CAAGGAATTATTTGCAGTACCATATTTGCTCCGAGGCGATGATGTCGAAA
ACACACCCACCTTCATCATTCAAACGGACGTAGTTGGTGACTTTCGGGGC
TTACTTGAGATCCGAAACATAAGAAAGTTCCTGCGCGTGGATACCCACGA
TCGAGTGTTCGAGTGCCGCCAGTGTCAATCCCACTTTGTGGACCGGGTGC
ACCTGGCGCTCCACAAACAAATCGCCTGTGGCAGGAACTTTATGGTGTGG
CACATGGACAAGGACGCCATCGAGTTGCACGAGAATTGCCTGCCTCTGCC
AAAGGAGTACTTCAAATATGAATGGGTCGGATTGGCAAGCAAGCGAATTT
AAAGTACTTTTAGATCATAATTCGAGATAGAACTTAATAAATTAATTCAA
ATGCGTAAAAAAAAAAAAAAA

FI01028.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG6885-RA 1210 CG6885-RA 1..1210 1..1210 6050 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:09:49
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 18734121..18735324 1..1204 5870 99.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:04:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18744494..18745703 1..1210 6050 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:40:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 18737594..18738803 1..1210 6050 100 Plus
Blast to na_te.dros performed on 2019-03-16 10:09:48 has no hits.

FI01028.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:10:31 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 18734121..18735326 1..1206 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:34:53 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
CG6885-RA 1..1137 16..1152 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:20:34 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
CG6885-RA 1..1137 16..1152 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:37:26 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
CG6885-RA 1..1137 16..1152 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:51:12 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
CG6885-RA 1..1137 16..1152 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:58:05 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
CG6885-RA 1..1137 16..1152 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:58:48 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
CG6885-RA 1..1206 1..1206 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:20:34 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
CG6885-RA 1..1206 1..1206 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:37:26 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
CG6885-RA 7..1212 1..1206 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:51:12 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
CG6885-RA 1..1206 1..1206 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:58:05 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
CG6885-RA 7..1212 1..1206 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:10:31 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18744494..18745699 1..1206 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:10:31 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18744494..18745699 1..1206 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:10:31 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18744494..18745699 1..1206 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:37:26 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18737594..18738799 1..1206 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:08:59 Download gff for FI01028.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18737594..18738799 1..1206 100   Plus

FI01028.pep Sequence

Translation from 15 to 1151

> FI01028.pep
MARRTQSRYIFDIEDNFRVFRHQFFVNGARRADCTTCESRVPVSEPYHHH
WRNDIENNRSHCIQIGSDEKDILKRIEDQAIEEFILCDGSIAARTNDFLL
DAGMDAVPQLLRFLSFGTEKLETTVGFYVDVKKERMYYESSPLNIENHFD
IGEAVDMIFSMLLEKISNYVLLHQKVPLEACVIRRMKVTVKRFCVSPKSN
SLKLPLQYRVKNATEVIGNGSNKHSSDLAQLSETYINQKDQNQHIPATLK
INLYTFRVCSTSKELFAVPYLLRGDDVENTPTFIIQTDVVGDFRGLLEIR
NIRKFLRVDTHDRVFECRQCQSHFVDRVHLALHKQIACGRNFMVWHMDKD
AIELHENCLPLPKEYFKYEWVGLASKRI*

FI01028.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:44:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23638-PA 368 GF23638-PA 1..367 1..377 1494 72.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:44:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13674-PA 374 GG13674-PA 1..374 1..378 1809 88.6 Plus
Dere\GG15737-PA 427 GG15737-PA 7..384 7..377 484 28.7 Plus
Dere\GG13660-PA 427 GG13660-PA 7..384 7..377 484 28.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:44:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14371-PA 359 GH14371-PA 1..359 1..376 1068 53.2 Plus
Dgri\GH11100-PA 425 GH11100-PA 11..381 7..374 492 30.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:03:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG6885-PA 378 CG6885-PA 1..378 1..378 1999 100 Plus
CG7271-PA 427 CG7271-PA 7..384 7..377 470 27.9 Plus
term-PA 428 CG4216-PA 8..385 7..377 467 27.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:44:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11314-PA 369 GI11314-PA 1..368 1..374 1009 50 Plus
Dmoj\GI13592-PA 419 GI13592-PA 5..376 7..377 461 29.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:44:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24879-PA 235 GL24879-PA 3..230 145..375 740 61.2 Plus
Dper\GL22878-PA 437 GL22878-PA 13..394 7..377 478 28.4 Plus
Dper\GL20453-PA 139 GL20453-PA 1..129 1..130 384 56.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:44:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19930-PA 376 GA19930-PA 1..371 1..375 1202 61.2 Plus
Dpse\GA20226-PA 437 GA20226-PA 13..394 7..377 477 28.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:44:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14989-PA 378 GM14989-PA 1..378 1..378 1976 96 Plus
Dsec\GM14975-PA 427 GM14975-PA 7..384 7..377 488 28.5 Plus
Dsec\GM14935-PA 427 GM14935-PA 7..384 7..377 454 27.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:44:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14766-PA 378 GD14766-PA 1..378 1..378 1988 96.8 Plus
Dsim\GD14752-PA 427 GD14752-PA 7..384 7..377 490 28.5 Plus
Dsim\GD12339-PA 134 GD12339-PA 7..111 7..114 150 29.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:44:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11571-PA 367 GJ11571-PA 1..365 1..373 1073 53.2 Plus
Dvir\GJ13931-PA 421 GJ13931-PA 8..378 7..377 541 31.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:44:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12077-PA 382 GK12077-PA 1..378 1..373 1014 55.3 Plus
Dwil\GK11209-PA 434 GK11209-PA 8..391 7..377 475 29.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:44:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19971-PA 378 GE19971-PA 1..378 1..378 1895 92.3 Plus
Dyak\GE22069-PA 423 GE22069-PA 7..380 7..377 497 29.3 Plus
Dyak\GE19957-PA 338 GE19957-PA 7..233 7..231 287 29.1 Plus

FI01028.hyp Sequence

Translation from 15 to 1151

> FI01028.hyp
MARRTQSRYIFDIEDNFRVFRHQFFVNGARRADCTTCESRVPVSEPYHHH
WRNDIENNRSHCIQIGSDEKDILKRIEDQAIEEFILCDGSIAARTNDFLL
DAGMDAVPQLLRFLSFGTEKLETTVGFYVDVKKERMYYESSPLNIENHFD
IGEAVDMIFSMLLEKISNYVLLHQKVPLEACVIRRMKVTVKRFCVSPKSN
SLKLPLQYRVKNATEVIGNGSNKHSSDLAQLSETYINQKDQNQHIPATLK
INLYTFRVCSTSKELFAVPYLLRGDDVENTPTFIIQTDVVGDFRGLLEIR
NIRKFLRVDTHDRVFECRQCQSHFVDRVHLALHKQIACGRNFMVWHMDKD
AIELHENCLPLPKEYFKYEWVGLASKRI*

FI01028.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:29:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG6885-PA 378 CG6885-PA 1..378 1..378 1999 100 Plus
CG7271-PA 427 CG7271-PA 7..384 7..377 470 27.9 Plus
term-PA 428 CG4216-PA 8..385 7..377 467 27.9 Plus