Clone FI01029 Report

Search the DGRC for FI01029

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:10
Well:29
Vector:pFlc-1
Associated Gene/TranscriptCG11275-RA
Protein status:FI01029.pep: gold
Sequenced Size:1681

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11275 2008-04-29 Release 5.5 accounting
CG11275 2008-08-15 Release 5.9 accounting
CG11275 2008-12-18 5.12 accounting

Clone Sequence Records

FI01029.complete Sequence

1681 bp (1681 high quality bases) assembled on 2006-09-12

GenBank Submission: BT025216

> FI01029.complete
CACCAGTTGAAGGTGGCGCGTTGCGCTCGACGGTTGTCGCTATTCTGGTT
CTCGCTCAAGTTATCCGAACTCTTGGAACAGCTGGGTAGTCTGGTCTGGC
CTGGCGCATAAAGACGCGATATCGGTCAAGTTCAGACGAAGAAGACGACG
ACGCGGCGATCACTCAATTAGCCTCACCGTGAGGGCGCGTGAAATTCACT
TTTAAATTTCCCCCAACTCGATTTTCACATACACAAATTGCTTTTGTTAC
GATTCTCGCGTGTGCTTGGTTGAAAAGGAATTTGTCACAGTGCCAAAAGA
TGAGCATCTCGGCGGTGGATCGCAAAGAGCCGGGCAGTGTGAGCAGCGGT
CTGGGTAGGCGATACGGGCAGCTGCTCCGTGGAGCCAAGTACACAGATTG
CGTGTTCCACGTGTGCGAGGAGCAAGTGAAATGCCACAAGCTCATCCTGA
GCTCCGCCAGTCCCGTTTTCGAGGCAATGTTCTTTGGTCCCATGCAAAAC
AACGAGCCCGAGCCGGAAATCGAAATCCACGACATAAGCTCTGCCATCTT
CAAGGTGCTGGTGGAGTACATCTACACGGGCGTCGTTGACTACAATGGCC
TGGAGCTGGTGGCCTGCATTGAGCTGTACTACGCCGCTGAGAAGTATCTG
CTGGAGGAGCTGATCGCCGACACGCTGATGGTTATCACCCGCAAGCTGCG
ATTTGCCAATATCTTGCCCGCTCTAGAGCTAAGTGTTTGCATGGGCCTCG
ACGGGTTGCTGGAGGTCTGCATGACCTTTTTCATGCGATGCTGTGTTAAT
AATGGACAGTATATGAGCCACCTTAAGGAGCACTATGTGCACGTGTCCAA
GGAGTGTGTGAAGGCCATAATAGCGGCGTGCAAGGAACCGCACAAGTTAC
TCATCTGGTATGTTTATGAGTGGACACGACAGGAGTGCGAGCAGTTGGGT
CTGGGTCCCAGCGATGCCGACTTAGTAGTGCACGACTTGGGTGGCAAAAC
AAGCGACTGGCCTGCGGCTTCGGGTGCTAGTGATTTGGAATCACCTGCCC
TAACTCCGGTGGTTTTGGTGGAGCGCTGCTATTACAAGGCCTGCAGGCCC
TTTACAGTGGATGCAGAAACTCCGCTGTTTCGCTTGCGTCTAAAGTGCTC
TAGATTTATCTCCTTGATGGGCTTGGTCCTGAACAGCAGGCTGACTCCCA
ACCTATTGGGTCACGTCCAGCAGCTGGAGTACCGCGAATCGCTGCGGCTG
GACCTTTGCGAGGTGCCCGCTGAAAGCGAGGGTCCGGCCACGTCGCCCGT
ATGGAGTCACGTTGTCCAGAGCCAGAATACCAAGTACAACTGCAACCTGC
ATCTTGGCTGGCGACGCGAAGAGGCCTGTGTGCTGAATCCGGAGCTGACC
TATGAGCTGCAGATCCGCTGGGACAGCAGTGCTTACGGCGCCGAGTATCC
GTGCAGCCTGCAGTCCTGCCAGGCGGACGGAATTCGGTTCACTGACGAGG
ACAGCTTCAGCGGAAGTCTCGTCAAGGGACTGCGCTATGCCAACCTGGTG
TAGCCACTTCAGCCGCGATATCATAATTAGTTAGTCCGTAAGACGTGTAT
GTATTTATTGCCCTAAGTTAATGTACGCTGCCTCAGAGTTCAATAAACTG
TGAGTAATATCGCTCCAAAAAAAAAAAAAAA

FI01029.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:43:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG11275-RA 1889 CG11275-RA 111..1776 4..1669 8315 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:16:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 18067800..18069166 298..1664 6610 98.9 Plus
chr2R 21145070 chr2R 18066217..18066514 4..299 1300 97.3 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:04:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:16:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22181274..22182645 298..1669 6845 99.9 Plus
2R 25286936 2R 22179696..22179991 4..299 1480 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:40:57
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 22182473..22183844 298..1669 6845 99.9 Plus
2R 25260384 2R 22180895..22181190 4..299 1480 100 Plus
Blast to na_te.dros performed on 2019-03-15 18:16:24 has no hits.

FI01029.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:17:11 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 18066214..18066514 1..299 96 -> Plus
chr2R 18067802..18069168 300..1666 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:34:55 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
CG11275-RA 1..1254 300..1553 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:20:36 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
CG11275-RA 1..1254 300..1553 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:59:07 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
CG11275-RA 1..1254 300..1553 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:51:14 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
CG11275-RA 1..1254 300..1553 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:58:26 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
CG11275-RA 1..1254 300..1553 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:58:49 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
CG11275-RA 2..1666 2..1666 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:20:36 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
CG11275-RA 1..1665 2..1666 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:59:07 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
CG11275-RA 2..1664 4..1666 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:51:14 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
CG11275-RA 2..1666 2..1666 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:58:26 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
CG11275-RA 2..1664 4..1666 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:17:11 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22179693..22179991 1..299 99 -> Plus
2R 22181276..22182642 300..1666 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:17:11 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22179693..22179991 1..299 99 -> Plus
2R 22181276..22182642 300..1666 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:17:11 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22179693..22179991 1..299 99 -> Plus
2R 22181276..22182642 300..1666 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:59:07 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18067198..18067496 1..299 99 -> Plus
arm_2R 18068781..18070147 300..1666 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:09:00 Download gff for FI01029.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22180892..22181190 1..299 99 -> Plus
2R 22182475..22183841 300..1666 99   Plus

FI01029.pep Sequence

Translation from 299 to 1552

> FI01029.pep
MSISAVDRKEPGSVSSGLGRRYGQLLRGAKYTDCVFHVCEEQVKCHKLIL
SSASPVFEAMFFGPMQNNEPEPEIEIHDISSAIFKVLVEYIYTGVVDYNG
LELVACIELYYAAEKYLLEELIADTLMVITRKLRFANILPALELSVCMGL
DGLLEVCMTFFMRCCVNNGQYMSHLKEHYVHVSKECVKAIIAACKEPHKL
LIWYVYEWTRQECEQLGLGPSDADLVVHDLGGKTSDWPAASGASDLESPA
LTPVVLVERCYYKACRPFTVDAETPLFRLRLKCSRFISLMGLVLNSRLTP
NLLGHVQQLEYRESLRLDLCEVPAESEGPATSPVWSHVVQSQNTKYNCNL
HLGWRREEACVLNPELTYELQIRWDSSAYGAEYPCSLQSCQADGIRFTDE
DSFSGSLVKGLRYANLV*

FI01029.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:44:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11653-PA 412 GF11653-PA 1..412 6..417 1840 81.4 Plus
Dana\GF20446-PA 716 GF20446-PA 22..119 25..122 165 42.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:44:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22171-PA 417 GG22171-PA 1..417 1..417 2099 94 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:44:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23073-PA 406 GH23073-PA 4..406 3..417 1408 66.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:28:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG11275-PA 417 CG11275-PA 1..417 1..417 2211 100 Plus
BTBD9-PB 722 CG1826-PB 28..219 18..210 156 26.1 Plus
BTBD9-PA 722 CG1826-PA 28..219 18..210 156 26.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:44:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21141-PA 406 GI21141-PA 7..406 1..417 1485 67.5 Plus
Dmoj\GI21681-PA 751 GI21681-PA 42..233 18..210 163 26.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:44:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11783-PA 423 GL11783-PA 1..423 1..417 1760 78.6 Plus
Dper\GL26310-PA 358 GL26310-PA 15..209 18..212 156 26.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:44:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10882-PA 423 GA10882-PA 6..423 1..417 1757 78.4 Plus
Dpse\GA28812-PA 372 GA28812-PA 6..209 8..212 156 26.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:44:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15891-PA 416 GM15891-PA 1..416 1..417 2140 95.9 Plus
Dsec\GM11431-PA 309 GM11431-PA 28..219 18..210 150 26.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:44:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15448-PA 417 GD15448-PA 1..417 1..417 2166 96.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:44:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20988-PA 404 GJ20988-PA 14..404 8..417 1476 68.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:44:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19642-PA 426 GK19642-PA 7..426 1..417 1593 70.7 Plus
Dwil\GK16320-PA 742 GK16320-PA 54..236 23..210 153 25.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:44:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14163-PA 417 GE14163-PA 1..417 1..417 2100 93.3 Plus
Dyak\GE17855-PA 759 GE17855-PA 43..234 18..210 151 25.1 Plus

FI01029.hyp Sequence

Translation from 299 to 1552

> FI01029.hyp
MSISAVDRKEPGSVSSGLGRRYGQLLRGAKYTDCVFHVCEEQVKCHKLIL
SSASPVFEAMFFGPMQNNEPEPEIEIHDISSAIFKVLVEYIYTGVVDYNG
LELVACIELYYAAEKYLLEELIADTLMVITRKLRFANILPALELSVCMGL
DGLLEVCMTFFMRCCVNNGQYMSHLKEHYVHVSKECVKAIIAACKEPHKL
LIWYVYEWTRQECEQLGLGPSDADLVVHDLGGKTSDWPAASGASDLESPA
LTPVVLVERCYYKACRPFTVDAETPLFRLRLKCSRFISLMGLVLNSRLTP
NLLGHVQQLEYRESLRLDLCEVPAESEGPATSPVWSHVVQSQNTKYNCNL
HLGWRREEACVLNPELTYELQIRWDSSAYGAEYPCSLQSCQADGIRFTDE
DSFSGSLVKGLRYANLV*

FI01029.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:29:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG11275-PA 417 CG11275-PA 1..417 1..417 2211 100 Plus
BTBD9-PB 722 CG1826-PB 28..219 18..210 156 26.1 Plus
BTBD9-PA 722 CG1826-PA 28..219 18..210 156 26.1 Plus