Clone FI01118 Report

Search the DGRC for FI01118

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:11
Well:18
Vector:pOT2
Associated Gene/Transcripthay-RA
Protein status:FI01118.pep: gold
Sequenced Size:2474

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
hay 2008-04-29 Release 5.5 accounting
hay 2008-08-15 Release 5.9 accounting
hay 2008-12-18 5.12 accounting

Clone Sequence Records

FI01118.complete Sequence

2474 bp assembled on 2006-10-19

GenBank Submission: BT025199

> FI01118.complete
TTTTATTTAAATGGGACCGCCGAAAAAATCGAGAAAGGATCGCAGCGGTG
GTGACAAGTTCGGCAAAAAGCGGCGTGCCGAGGATGAGGCTTTCACCCAA
CTGGTGGACGACAATGATAGTTTGGATGCCACAGAATCGGAAGGAATTCC
GGGTGCAGCGTCCAAGAATGCGGAGACCAATGACGAGCAAATCAATACGG
ATGAGTACGGCGCCAAGGATTACCGGTCGCAGATGCAACTGCGTCCGGAT
CACGGAAATCGACCACTTTGGGTTGCGCCCAATGGTCACGTCTTCCTGGA
ATCATTCTCGCCCGTCTATAAGCATGCCCACGATTTTCTTATCGCCATTT
CGGAGCCCGTCTGCCGACCCGAACACATTCACGAGTACAAACTTACCGCA
TACAGTTTATATGCCGCCGTTTCGGTGGGACTGCAAACCCATGACATTGT
GGAATACTTGAAGAGATTGAGCAAGACCAGCATTCCCGAAGGCATCCTTG
AGTTTATACGACTCTGCACCCTATCCTATGGCAAGGTCAAGCTGGTCTTG
AAGCATAACAAGTACTTTATCGAGTCACCACATCCTGAGGTGCTGCAAAA
GTTACTTAAGGATCCAGTGATCCAGAAATGCCGCCTCATACGCAGCGAGG
GAGAGGATTTCATTCAGGGAACCCTGGACGGCAAGGCTATTACTCAATTC
GGGACCAAACTGCCGCCAGGAGCCACGGACAAGCCGACACCAGATCCTGC
AGCAGCCGCAGGAGCTGATGGAACCACAGCAGTGCCAGAAGATATCACAG
ACTTCTACGAGAAGATCGACAAAGAGGAGGAGGACGAGGATGAGGCCAAT
CTGAAGACCGTGTCGTTTGAGGTGGCCCAGGAGAAGATCGAAGTGATTCA
GAAACGATGCATCGAGATAGAGCATCCTCTATTGGCGGAGTACGATTTCC
GCAACGATACCAACAATCCAGACATTAATATTGACCTCAAACCCGCTGCC
GTTCTGCGTCCATATCAGGAGAAGAGTCTGCGCAAGATGTTTGGCAATGG
AAGAGCCCGCTCTGGTGTTATTGTGCTTCCTTGTGGTGCAGGAAAATCCC
TAGTGGGTGTCACAGCATGCTGCACCGTACGAAAGAGGGCACTAGTTCTG
TGCAACAGTGGTGTTTCTGTGGAGCAGTGGAAGCAGCAGTTTAAGATGTG
GTCCACAGCTGATGACAGCATGATTTGTAGATTCACCTCTGAAGCAAAAG
ACAAACCCATGGGCTGTGGAATTCTTGTGACCACATACTCTATGATAACG
CACACGCAGAAGAGATCATGGGAAGCAGAGCAGACCATGCGTTGGCTGCA
GGAGCAGGAATGGGGCATCATGGTGCTGGACGAGGTGCACACCATCCCAG
CCAAAATGTTCCGTCGCGTGCTGACCATCGTTCAATCTCATTGCAAGCTG
GGATTGACGGCCACACTACTGCGTGAAGATGACAAGATTGCCGATCTCAA
CTTCCTCATTGGACCCAAACTGTACGAGGCCAACTGGTTAGAGCTGCAAA
AGAAGGGATATATTGCACGCGTGCAGTGCGCCGAGGTGTGGTGTCCCATG
TCACCGGAGTTCTATCGCGAGTACCTGACCACCAAGACCTCCAAAAAGAT
GTTGCTCTATGTGATGAATCCCTCCAAGTTCCGCAGCTGCCAGTTTCTTA
TTAAATATCACGAGCAACGAGGCGACAAAACAATCGTCTTCTCAGATAAT
GTGTTTGCGCTAAAACACTATGCGATCAAGATGAACAAGCCTTTCATCTA
TGGTCCCACCTCGCAGAACGAACGTATCCAGATCCTCCAGAACTTTAAGT
TTAACTCCAAGGTTAATACAATCTTCGTGTCCAAAGTGGCAGACACCAGT
TTCGATTTGCCCGAGGCTAATGTGCTTATCCAGATCTCTTCGCATGGCGG
CTCTCGTCGTCAGGAGGCCCAGCGTCTGGGTCGTATTCTGCGTGCTAAGA
AGGGTGCCATTGCCGAGGAATACAACGCCTTCTTCTATACACTCGTCTCG
CAGGATACCATGGAGATGAGCTACTCCCGCAAGCGACAGCGGTTCTTGGT
CAACCAGGGCTATAGCTACAAGGTTATCACGCATCTCAAGGGCATGGACA
CGGACTCGGATTTGATGTACGGCACACAGGAGGAGCAGGGACAACTGCTG
CAGTTGGTCCTATCCGCTTCCGATTTGGACTGCGAGGATGAGAAGCTGCC
GGGCGAGCCGGGCTACCGTCCCAGTGGCTCGGGCGGCGCCGTCAGACGTG
TCGGCGGACTGAGCTCCATGTCTGGCGGAGATGATGCCATCTACTACGAA
CATCGTAAAAAGAACATTGGCAGCGTGCATCCGCTCTTCAAAAAATTCAG
AGGATAGACCTAAGAAAAGCACAAACCACTGTGAAGCATGAATAAAATTC
TGAACAAAAAAAAAAAAAAAAAAA

FI01118.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:43:39
Subject Length Description Subject Range Query Range Score Percent Strand
hay-RB 2686 hay-RB 213..2670 1..2458 12290 100 Plus
hay-RA 2597 hay-RA 124..2581 1..2458 12290 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:08:42
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 10622907..10624720 62..1863 8645 98.6 Plus
chr3L 24539361 chr3L 10624774..10625369 1860..2455 2950 99.7 Plus
chr3L 24539361 chr3L 10622786..10622848 1..63 315 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:05:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:08:40
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10631519..10633320 62..1863 9010 100 Plus
3L 28110227 3L 10633374..10633972 1860..2458 2995 100 Plus
3L 28110227 3L 10631398..10631460 1..63 315 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:41:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 10624619..10626420 62..1863 9010 100 Plus
3L 28103327 3L 10626474..10627072 1860..2458 2995 100 Plus
3L 28103327 3L 10624498..10624560 1..63 315 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:08:40 has no hits.

FI01118.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:09:32 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 10622786..10622847 1..62 100 -> Plus
chr3L 10622908..10624718 63..1861 98 -> Plus
chr3L 10624776..10625369 1862..2455 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:35:39 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
hay-RB 1..2397 11..2407 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:20:54 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
hay-RB 1..2397 11..2407 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:58:03 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
hay-RA 1..2397 11..2407 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:01:12 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
hay-RB 1..2397 11..2407 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:22:45 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
hay-RA 1..2397 11..2407 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:01:39 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
hay-RB 57..2511 1..2455 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:20:54 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
hay-RB 57..2511 1..2455 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:58:03 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
hay-RA 150..2604 1..2455 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:01:12 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
hay-RB 57..2511 1..2455 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:22:45 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
hay-RA 150..2604 1..2455 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:32 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10631398..10631459 1..62 100 -> Plus
3L 10631520..10633318 63..1861 100 -> Plus
3L 10633376..10633969 1862..2455 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:32 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10631398..10631459 1..62 100 -> Plus
3L 10631520..10633318 63..1861 100 -> Plus
3L 10633376..10633969 1862..2455 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:32 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10631398..10631459 1..62 100 -> Plus
3L 10631520..10633318 63..1861 100 -> Plus
3L 10633376..10633969 1862..2455 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:58:03 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10624498..10624559 1..62 100 -> Plus
arm_3L 10624620..10626418 63..1861 100 -> Plus
arm_3L 10626476..10627069 1862..2455 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:09:11 Download gff for FI01118.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10624620..10626418 63..1861 100 -> Plus
3L 10626476..10627069 1862..2455 100   Plus
3L 10624498..10624559 1..62 100 -> Plus

FI01118.pep Sequence

Translation from 10 to 2406

> FI01118.pep
MGPPKKSRKDRSGGDKFGKKRRAEDEAFTQLVDDNDSLDATESEGIPGAA
SKNAETNDEQINTDEYGAKDYRSQMQLRPDHGNRPLWVAPNGHVFLESFS
PVYKHAHDFLIAISEPVCRPEHIHEYKLTAYSLYAAVSVGLQTHDIVEYL
KRLSKTSIPEGILEFIRLCTLSYGKVKLVLKHNKYFIESPHPEVLQKLLK
DPVIQKCRLIRSEGEDFIQGTLDGKAITQFGTKLPPGATDKPTPDPAAAA
GADGTTAVPEDITDFYEKIDKEEEDEDEANLKTVSFEVAQEKIEVIQKRC
IEIEHPLLAEYDFRNDTNNPDINIDLKPAAVLRPYQEKSLRKMFGNGRAR
SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTA
DDSMICRFTSEAKDKPMGCGILVTTYSMITHTQKRSWEAEQTMRWLQEQE
WGIMVLDEVHTIPAKMFRRVLTIVQSHCKLGLTATLLREDDKIADLNFLI
GPKLYEANWLELQKKGYIARVQCAEVWCPMSPEFYREYLTTKTSKKMLLY
VMNPSKFRSCQFLIKYHEQRGDKTIVFSDNVFALKHYAIKMNKPFIYGPT
SQNERIQILQNFKFNSKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRR
QEAQRLGRILRAKKGAIAEEYNAFFYTLVSQDTMEMSYSRKRQRFLVNQG
YSYKVITHLKGMDTDSDLMYGTQEEQGQLLQLVLSASDLDCEDEKLPGEP
GYRPSGSGGAVRRVGGLSSMSGGDDAIYYEHRKKNIGSVHPLFKKFRG*

FI01118.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:53:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10598-PA 803 GF10598-PA 1..803 1..798 3995 94.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:53:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15440-PA 802 GG15440-PA 1..802 1..798 4257 97.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:53:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14950-PA 806 GH14950-PA 1..806 1..798 3985 93.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:38
Subject Length Description Subject Range Query Range Score Percent Strand
hay-PB 798 CG8019-PB 1..798 1..798 4186 100 Plus
hay-PA 798 CG8019-PA 1..798 1..798 4186 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:53:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11476-PA 430 GI11476-PA 1..250 1..250 1185 86.5 Plus
Dmoj\GI11476-PA 430 GI11476-PA 248..430 615..798 904 91.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:53:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15471-PA 797 GL15471-PA 1..797 1..798 4006 95.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:53:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20769-PA 797 GA20769-PA 1..797 1..798 4006 95.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:53:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25215-PA 802 GM25215-PA 1..802 1..798 4285 98.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:53:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14248-PA 802 GD14248-PA 1..802 1..798 4276 98.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:53:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13670-PA 809 GJ13670-PA 1..809 1..798 4004 93.2 Plus
Dvir\GJ13669-PA 117 GJ13669-PA 1..117 204..325 210 39.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:53:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12273-PA 804 GK12273-PA 1..804 1..798 3914 91.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:53:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21750-PA 802 GE21750-PA 1..802 1..798 4256 97.6 Plus

FI01118.hyp Sequence

Translation from 10 to 2406

> FI01118.hyp
MGPPKKSRKDRSGGDKFGKKRRAEDEAFTQLVDDNDSLDATESEGIPGAA
SKNAETNDEQINTDEYGAKDYRSQMQLRPDHGNRPLWVAPNGHVFLESFS
PVYKHAHDFLIAISEPVCRPEHIHEYKLTAYSLYAAVSVGLQTHDIVEYL
KRLSKTSIPEGILEFIRLCTLSYGKVKLVLKHNKYFIESPHPEVLQKLLK
DPVIQKCRLIRSEGEDFIQGTLDGKAITQFGTKLPPGATDKPTPDPAAAA
GADGTTAVPEDITDFYEKIDKEEEDEDEANLKTVSFEVAQEKIEVIQKRC
IEIEHPLLAEYDFRNDTNNPDINIDLKPAAVLRPYQEKSLRKMFGNGRAR
SGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTA
DDSMICRFTSEAKDKPMGCGILVTTYSMITHTQKRSWEAEQTMRWLQEQE
WGIMVLDEVHTIPAKMFRRVLTIVQSHCKLGLTATLLREDDKIADLNFLI
GPKLYEANWLELQKKGYIARVQCAEVWCPMSPEFYREYLTTKTSKKMLLY
VMNPSKFRSCQFLIKYHEQRGDKTIVFSDNVFALKHYAIKMNKPFIYGPT
SQNERIQILQNFKFNSKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRR
QEAQRLGRILRAKKGAIAEEYNAFFYTLVSQDTMEMSYSRKRQRFLVNQG
YSYKVITHLKGMDTDSDLMYGTQEEQGQLLQLVLSASDLDCEDEKLPGEP
GYRPSGSGGAVRRVGGLSSMSGGDDAIYYEHRKKNIGSVHPLFKKFRG*

FI01118.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:31:56
Subject Length Description Subject Range Query Range Score Percent Strand
hay-PB 798 CG8019-PB 1..798 1..798 4186 100 Plus
hay-PA 798 CG8019-PA 1..798 1..798 4186 100 Plus