Clone FI01122 Report

Search the DGRC for FI01122

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:11
Well:22
Vector:pOT2
Associated Gene/Transcriptcyc-RA
Protein status:FI01122.pep: gold
Sequenced Size:1623

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
cyc 2008-04-29 Release 5.5 accounting
cyc 2008-08-15 Release 5.9 accounting
cyc 2008-12-18 5.12 accounting

Clone Sequence Records

FI01122.complete Sequence

1623 bp (1623 high quality bases) assembled on 2006-09-12

GenBank Submission: BT025197

> FI01122.complete
TGAAGATGCAGGAAAAGCTTGCAACAAATTGTCGGCCTGCACAAACTTCC
GTTTTAAATGTTATTATTGGGACGTTGATGCTAGTCGATGTTAGTAAACA
AACAAAAGGGAGGTCTTCGTCGGAAAGGGCTTAATTTTTCATAAGCAAAC
GTCACCGATTGGCGATGGAAGTTCAGGAGTTCTGCGAAAATATGGAGGAG
ATCGAAGATGAAAACTACGACGAGGAGAAGTCAGCTAGAACCTCGGATGA
AAATCGCAAGCAAAATCACAGCGAGATCGAGAAGCGGCGTCGGGACAAGA
TGAACACGTACATCAACGAGCTCTCCTCCATGATTCCCATGTGCTTTGCG
ATGCAGCGAAAGCTGGACAAACTGACTGTGCTCCGGATGGCAGTGCAGCA
TCTGCGAGGGATCCGTGGCAGCGGCAGCTTACATCCATTCAACGGATCCG
ATTACCGGCCTAGCTTCCTGTCCGACCAGGAGCTCAAGATGATTATCCTG
CAAGCGTCGGAGGGATTCCTGTTCGTGGTGGGTTGTGACCGAGGACGCAT
CCTGTACGTTTCCGATTCGGTGTCCAGTGTGCTGAACAGCACCCAAGCGG
ACCTGCTGGGACAGAGCTGGTTCGACGTCCTGCATCCGAAGGACATAGGC
AAGGTTAAGGAGCAGCTATCCTCACTGGAACAGTGTCCCAGGGAAAGGCT
TATCGATGCGAAGACCATGTTGCCCGTTAAGACCGACGTTCCACAGAGCT
TGTGCCGCCTGTGTCCGGGTGCCCGGCGCTCCTTCTTCTGCCGCATGAAG
CTGCGCACTGCCAGCAACAACCAGATCAAGGAGGAGTCCGATACGTCCTC
CAGCTCCCGGAGCTCCACGAAGCGCAAGTCCAGACTGACTACGGGCCACA
AGTACCGGGTTATCCAGTGCACGGGCTACCTCAAGTCCTGGACACCCATC
AAGGACGAGGACCAGGACGCCGACAGCGACGAGCAGACAACGAATCTATC
CTGCCTTGTGGCAATTGGTCGCATTCCGCCCAACGTTCGCAACTCCACAG
TACCCGCCTCGCTGGACAATCACCCGAACATACGGCACGTGCTCTTCATC
TCGCGCCACTCCGGCGAGGGCAAGTTCCTGTTCATAGACCAGCGTGCCAC
CCTCGTGATTGGTTTCCTGCCTCAGGAGATCCTCGGCACCAGCTTCTACG
AGTACTTCCACAACGAAGACATCGCTGCGCTGATGGAGTCTCACAAGATG
GTGATGCAGGTGCCGGAAAAGGTGACCACTCAGGTCTACCGCTTCCGGTG
CAAGGACAACAGCTACATTCAGCTGCAGAGCGAGTGGCGGGCCTTCAAGA
ATCCCTGGACGAGCGAGATTGACTATATAATCGCCAAGAATTCCGTGTTC
TTATAAGGCATACGAACGTTCCGATGGGGAACATTACTTTTATTTATTCC
ACTACAATCCGACATTTGTATACACTCCAAAGATCTTCATCCGCATCGAG
TTGCTGGCGCCGGCGTTTGAAATTCCATATTCGATATACAAACTTTACCT
AATGATAAGCCCATCATTTTTGTACCGCCTCAATTAAATTAACTAACAAC
TTGAAAAAAAAAAAAAAAAAAAA

FI01122.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:43:28
Subject Length Description Subject Range Query Range Score Percent Strand
cyc-RA 1673 cyc-RA 52..1658 1..1607 8020 99.9 Plus
cyc.a 1626 cyc.a 1..1611 1..1607 7955 99.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:07:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 19803169..19803628 1603..1144 2300 100 Minus
chr3L 24539361 chr3L 19804184..19804638 714..260 2275 100 Minus
chr3L 24539361 chr3L 19803684..19804113 1144..715 2135 99.8 Minus
chr3L 24539361 chr3L 19805131..19805314 184..1 920 100 Minus
chr3L 24539361 chr3L 19804797..19804873 260..184 385 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:05:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:07:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19813788..19814251 1607..1144 2320 100 Minus
3L 28110227 3L 19814807..19815261 714..260 2275 100 Minus
3L 28110227 3L 19814307..19814736 1144..715 2135 99.8 Minus
3L 28110227 3L 19815755..19815938 184..1 920 100 Minus
3L 28110227 3L 19815420..19815496 260..184 385 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:40:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 19806888..19807351 1607..1144 2320 100 Minus
3L 28103327 3L 19807907..19808361 714..260 2275 100 Minus
3L 28103327 3L 19807407..19807836 1144..715 2135 99.7 Minus
3L 28103327 3L 19808855..19809038 184..1 920 100 Minus
3L 28103327 3L 19808520..19808596 260..184 385 100 Minus
Blast to na_te.dros performed on 2019-03-15 20:07:51 has no hits.

FI01122.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:08:48 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 19803169..19803627 1145..1603 100 <- Minus
chr3L 19803684..19804113 715..1144 99 <- Minus
chr3L 19804184..19804638 260..714 100 <- Minus
chr3L 19804798..19804872 185..259 100 <- Minus
chr3L 19805131..19805314 1..184 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:35:45 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
cyc-RA 1..1242 165..1406 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:20:27 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
cyc-RA 1..1242 165..1406 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 04:48:26 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
cyc-RA 1..1242 165..1406 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:51:00 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
cyc-RA 1..1242 165..1406 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:29:03 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
cyc-RA 1..1242 165..1406 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:58:37 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
cyc-RA 1..1603 1..1603 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:20:27 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
cyc-RA 1..1603 1..1603 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:48:26 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
cyc-RA 1..1603 1..1603 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:51:00 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
cyc-RA 1..1603 1..1603 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:29:03 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
cyc-RA 1..1603 1..1603 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:08:48 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19813792..19814250 1145..1603 100 <- Minus
3L 19814307..19814736 715..1144 99 <- Minus
3L 19814807..19815261 260..714 100 <- Minus
3L 19815421..19815495 185..259 100 <- Minus
3L 19815755..19815938 1..184 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:08:48 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19813792..19814250 1145..1603 100 <- Minus
3L 19814307..19814736 715..1144 99 <- Minus
3L 19814807..19815261 260..714 100 <- Minus
3L 19815421..19815495 185..259 100 <- Minus
3L 19815755..19815938 1..184 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:08:48 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19813792..19814250 1145..1603 100 <- Minus
3L 19814307..19814736 715..1144 99 <- Minus
3L 19814807..19815261 260..714 100 <- Minus
3L 19815421..19815495 185..259 100 <- Minus
3L 19815755..19815938 1..184 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:48:26 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19806892..19807350 1145..1603 100 <- Minus
arm_3L 19807407..19807836 715..1144 99 <- Minus
arm_3L 19807907..19808361 260..714 100 <- Minus
arm_3L 19808521..19808595 185..259 100 <- Minus
arm_3L 19808855..19809038 1..184 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:08:54 Download gff for FI01122.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19806892..19807350 1145..1603 100 <- Minus
3L 19807407..19807836 715..1144 99 <- Minus
3L 19807907..19808361 260..714 100 <- Minus
3L 19808521..19808595 185..259 100 <- Minus
3L 19808855..19809038 1..184 100   Minus

FI01122.pep Sequence

Translation from 164 to 1405

> FI01122.pep
MEVQEFCENMEEIEDENYDEEKSARTSDENRKQNHSEIEKRRRDKMNTYI
NELSSMIPMCFAMQRKLDKLTVLRMAVQHLRGIRGSGSLHPFNGSDYRPS
FLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADLLGQ
SWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLC
PGARRSFFCRMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTTGHKYRVI
QCTGYLKSWTPIKDEDQDADSDEQTTNLSCLVAIGRIPPNVRNSTVPASL
DNHPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFYEYFHN
EDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSYIQLQSEWRAFKNPWTS
EIDYIIAKNSVFL*

FI01122.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 22:36:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10846-PA 412 GF10846-PA 1..412 1..413 2028 94.9 Plus
Dana\GF18433-PA 648 GF18433-PA 15..384 32..410 783 42.1 Plus
Dana\GF17581-PA 746 GF17581-PA 26..380 32..412 320 27.8 Plus
Dana\GF24152-PA 999 GF24152-PA 20..365 39..411 283 25.6 Plus
Dana\GF21231-PA 706 GF21231-PA 12..368 39..412 227 25.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 22:36:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13369-PA 413 GG13369-PA 1..413 1..413 2198 97.8 Plus
Dere\GG17399-PA 645 GG17399-PA 15..384 32..410 788 42.7 Plus
Dere\GG19445-PA 698 GG19445-PA 26..380 32..412 323 27.8 Plus
Dere\GG14938-PA 1082 GG14938-PA 24..366 39..411 299 26.1 Plus
Dere\per-PA 1261 GG18618-PA 267..552 85..412 227 22.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 22:36:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16911-PA 409 GH16911-PA 1..409 3..413 1875 88.6 Plus
Dgri\GH18221-PA 645 GH18221-PA 15..384 32..410 784 42.1 Plus
Dgri\GH18379-PA 774 GH18379-PA 26..380 32..412 312 27.3 Plus
Dgri\GH16514-PA 1034 GH16514-PA 20..359 39..411 281 25.8 Plus
Dgri\GH19178-PA 1566 GH19178-PA 61..383 22..384 217 25.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:21:29
Subject Length Description Subject Range Query Range Score Percent Strand
cyc-PA 413 CG8727-PA 1..413 1..413 2150 100 Plus
tgo-PB 642 CG11987-PB 4..384 24..410 765 42.3 Plus
tgo-PA 642 CG11987-PA 4..384 24..410 765 42.3 Plus
Clk-PA 1023 CG7391-PA 1..362 13..411 323 25.7 Plus
Clk-PD 1027 CG7391-PD 2..366 15..411 316 25.9 Plus
sim-PB 664 CG7771-PB 2..355 32..411 304 27.2 Plus
sim-PC 675 CG7771-PC 13..366 32..411 304 27.2 Plus
sim-PA 688 CG7771-PA 26..379 32..411 304 27.2 Plus
sim-PD 672 CG7771-PD 2..363 32..411 300 27.8 Plus
Clk-PF 961 CG7391-PF 14..300 96..411 254 25.7 Plus
gce-PE 959 CG42739-PE 279..640 32..411 232 23.8 Plus
gce-PD 959 CG42739-PD 279..640 32..411 232 23.8 Plus
gce-PC 959 CG15032-PB 279..640 32..411 232 23.8 Plus
gce-PG 959 CG42739-PG 279..640 32..411 232 23.8 Plus
sima-PB 426 CG45051-PB 64..399 22..390 221 24.3 Plus
sima-PA 1507 CG45051-PA 64..399 22..390 221 24.3 Plus
sima-PD 1593 CG45051-PD 155..485 27..390 213 24.1 Plus
trh-PE 952 CG42865-PE 85..476 29..389 212 23.3 Plus
trh-PF 989 CG42865-PF 122..513 29..389 212 23.3 Plus
trh-PA 958 CG6883-PA 85..482 29..389 199 23.4 Plus
trh-PD 1022 CG42865-PD 85..482 29..389 199 23.4 Plus
per-PB 1218 CG2647-PB 391..496 311..412 196 29.2 Plus
per-PA 1218 CG2647-PA 391..496 311..412 196 29.2 Plus
Clk-PH 895 CG7391-PH 135..234 311..411 192 37.6 Plus
Clk-PG 895 CG7391-PG 135..234 311..411 192 37.6 Plus
trh-PG 923 CG42865-PG 85..447 29..389 192 23.8 Plus
Met-PB 716 CG1705-PB 28..185 23..168 171 31.9 Plus
Met-PA 716 CG1705-PA 28..185 23..168 171 31.9 Plus
trh-PB 929 CG6883-PB 85..237 29..168 170 30.5 Plus
trh-PC 966 CG42865-PC 122..274 29..168 170 30.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 22:36:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13667-PA 408 GI13667-PA 1..408 3..413 1859 90.3 Plus
Dmoj\GI10175-PA 653 GI10175-PA 15..384 32..410 775 41.8 Plus
Dmoj\GI23369-PA 779 GI23369-PA 26..380 32..412 320 27.1 Plus
Dmoj\GI12195-PA 1039 GI12195-PA 20..356 39..411 308 25.4 Plus
Dmoj\per-PA 1112 GI16295-PA 106..476 7..412 213 21.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 22:36:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15678-PA 436 GL15678-PA 30..436 6..413 1840 88.7 Plus
Dper\GL12493-PA 646 GL12493-PA 15..384 32..410 787 42.3 Plus
Dper\GL24392-PA 764 GL24392-PA 26..380 32..412 316 27.8 Plus
Dper\GL17825-PA 1039 GL17825-PA 20..361 39..411 284 26 Plus
Dper\GL14029-PA 1525 GL14029-PA 55..389 22..390 192 25.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 22:36:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21284-PA 436 GA21284-PA 30..436 6..413 1833 88.5 Plus
Dpse\GA11313-PA 646 GA11313-PA 15..384 32..410 787 42.3 Plus
Dpse\GA26599-PA 767 GA26599-PA 26..380 32..412 317 27.8 Plus
Dpse\GA20318-PA 1037 GA20318-PA 20..361 39..411 285 26 Plus
Dpse\per-PA 1271 GA15408-PA 200..458 116..412 223 23.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:36:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16138-PA 413 GM16138-PA 1..413 1..413 2214 98.8 Plus
Dsec\GM26289-PA 634 GM26289-PA 15..384 32..410 787 42.7 Plus
Dsec\GM24085-PA 632 GM24085-PA 36..315 105..412 265 28.3 Plus
Dsec\GM24988-PA 933 GM24988-PA 1..272 111..411 214 25 Plus
Dsec\per-PA 1232 GM19238-PA 263..521 116..412 212 22.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 22:36:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12247-PA 413 GD12247-PA 1..413 1..413 2216 99 Plus
Dsim\GD20825-PA 424 GD20825-PA 15..384 32..410 787 42.7 Plus
Dsim\GD18883-PA 697 GD18883-PA 26..380 32..412 323 27.8 Plus
Dsim\GD13034-PA 1005 GD13034-PA 15..357 39..411 306 26.7 Plus
Dsim\GD17204-PA 703 GD17204-PA 31..386 39..412 229 25.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 22:36:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14003-PA 407 GJ14003-PA 4..407 6..413 1808 84.8 Plus
Dvir\GJ10876-PA 649 GJ10876-PA 15..384 32..410 774 41.8 Plus
Dvir\sim-PA 761 GJ10364-PA 26..380 32..412 321 27.8 Plus
Dvir\GJ11427-PA 988 GJ11427-PA 20..355 39..411 307 27.8 Plus
Dvir\GJ16946-PA 709 GJ16946-PA 10..366 39..412 218 25.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 22:36:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17217-PA 410 GK17217-PA 1..410 1..413 1941 90.8 Plus
Dwil\GK11420-PA 651 GK11420-PA 15..384 32..410 778 42.4 Plus
Dwil\GK22407-PA 743 GK22407-PA 26..380 32..412 317 27.5 Plus
Dwil\GK10694-PA 1132 GK10694-PA 20..363 39..411 302 25.8 Plus
Dwil\per-PA 1159 GK19903-PA 216..474 116..412 222 23.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 22:36:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22462-PA 413 GE22462-PA 1..413 1..413 2204 98.5 Plus
Dyak\GE24803-PA 641 GE24803-PA 15..384 32..410 786 42.7 Plus
Dyak\GE26246-PA 699 GE26246-PA 26..380 32..412 319 27.5 Plus
Dyak\GE17175-PA 682 GE17175-PA 10..366 39..412 223 24.9 Plus
Dyak\GE16269-PA 534 GE16269-PA 242..500 116..412 221 23.2 Plus

FI01122.hyp Sequence

Translation from 164 to 1405

> FI01122.hyp
MEVQEFCENMEEIEDENYDEEKSARTSDENRKQNHSEIEKRRRDKMNTYI
NELSSMIPMCFAMQRKLDKLTVLRMAVQHLRGIRGSGSLHPFNGSDYRPS
FLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADLLGQ
SWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLC
PGARRSFFCRMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTTGHKYRVI
QCTGYLKSWTPIKDEDQDADSDEQTTNLSCLVAIGRIPPNVRNSTVPASL
DNHPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFYEYFHN
EDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSYIQLQSEWRAFKNPWTS
EIDYIIAKNSVFL*

FI01122.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:32:08
Subject Length Description Subject Range Query Range Score Percent Strand
cyc-PA 413 CG8727-PA 1..413 1..413 2150 100 Plus
tgo-PB 642 CG11987-PB 4..384 24..410 765 42.3 Plus
tgo-PA 642 CG11987-PA 4..384 24..410 765 42.3 Plus
Clk-PA 1023 CG7391-PA 1..362 13..411 323 25.7 Plus
Clk-PD 1027 CG7391-PD 2..366 15..411 316 25.9 Plus