Clone FI01305 Report

Search the DGRC for FI01305

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:13
Well:5
Vector:pOTB7
Associated Gene/TranscriptTaf7-RA
Protein status:FI01305.pep: gold
Sequenced Size:1751

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Taf7 2008-04-29 Release 5.5 accounting
Taf7 2008-08-15 Release 5.9 accounting
Taf7 2008-12-18 5.12 accounting

Clone Sequence Records

FI01305.complete Sequence

1751 bp (1751 high quality bases) assembled on 2006-09-12

GenBank Submission: BT025189

> FI01305.complete
GTCATGGCAAAAGGGATGAGAAGACGAAATTGGAGCAGGGTTGGCTGACG
ATTGCCTTATCGATAGTTCAGCGGACTCACATCCGATATTCAAAGCAGTG
CGGCTCATCCCCTTTCAACGTACGGCAAACCCATTCGGTCTTCACCTTTA
TGATTAAATTTGTTGATGCGGCTGCAGTGTGAACCATTTTAAATATTCGT
CGTGCTCGCAGCGATAACTGTGACGTGAATGCCATCACTAGCGGTGCCCC
ATCTAACTCCCATCTCTAATGAGCATTTAGTGTCTTCAAAAGAAGTTGTA
TTTTTCTGGAAAAATCGCATTGAAATGTTTGAAAAGAAGAGCGACAAGGT
TAAGCAAGCGGAGCACAAGGCCCGGGATGATGGCGTAGAGCTGGAGAGCC
AGTTTATCATGCGCGTGCCGAAGGAACTGGCGGACACGGTCCATGAGGCA
ATAAATGCTGGCACCATTAAGGACCGGCTGACCATCCAACTGGATCCGGA
TCTGAGGTACGGTGAAGTGCGAATAGATGATCAGATACTGTACACGAAAC
TCGTGGATTTGCCCACCGTCGTCGAGAGCTACAAGACCATTGACAACAAG
AGCTTCTACAAGTCGGCAGACATCTGCCAAATACTCATTTGCAAGGAGGA
GCGGGAGGACGAGACGGAAAAGGAGTCGCCCAACAAGAACAAAAAGAAGG
ACCCCAACAAGGTGGACAAAAAATACCTCTTTCCGCACGGCATCACACCG
CCGTGCAAGAATGTGAGAAAACGACGATTCCGCAAAACTCTGAAGAAAAA
GAATGTCGAAGCTCCCGAGATTGAGAAGGAAGTGAAACATCTGCTGCGCA
TTGACAACGAGGCTGTCAGAGTTGACTATGAAATCATAAACGAAGAGGAC
AAGCCAATGGATGAACTGGAGCAATCGGACATCAAACCCTACAACGATGC
GGATGACGATTTGCAGGACGAAAGCACCATGCATGCCAGCGAAAAGACGA
TCATGGAAATGAGCTCCCAGCGGCACCTCCAAGTGGAGTCCGATGATGAC
GAAGCCAGCAACTTTCCCTCACACCGGGCGCCGAACATGGGAGTTGCTGT
CCACGACATCTTCGGCGAGGAAGTGTCCAGCACGGATGACGAGGATGAGC
CCGATCGGGGCAATAACACCATGCAGCGGCGGGTGATGGAGGAATCCTCA
CGACTCTCGGCTGATGATTCACGAATGTCGGACTTCTTTGGCGCTAGTGG
CAGTAATACTGGAGCGGGCGTAGTGAAAATGGAGCAGAACGTGTTCAGCA
AGTCTATGTTTGGGCATGAAGCCAGCAGTCCTAAGCTCAGCGCCGCCGGA
TCAAGCTCCAACCTTGCTGCTCCCAGTGGCTTCTACGATAGCCAAATGCT
AGCCAAGCGCGAGGAGTTCGAGAACATGGAATTCATAGACGAACCGCAGC
CGCAGTACACGCAGCAACAGGTCCAGCAGAAGATCAATCAACTGACGCGC
CAGATTCGTGAACTGAAAGCGCAGCAGGTGCAAAAGTCAACGGAAATTGC
TTCCATTCAGAATGCCACACTCAAACAACGAATGCAGGAAACGCTTGATA
ATCTCTACACACAGGTTATTGAAAGGGAATTGGAGCTGAAGGACTTCGAG
AATATGCTGGAGTCTTAAGATACAGATATAATACAAATGGTGGACTAGCA
TAAGTTATAATAAAAACTATGTACATACATAAAAAAAAAAAAAAAAAAAA
A

FI01305.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:43:25
Subject Length Description Subject Range Query Range Score Percent Strand
Taf7-RA 2263 Taf7-RA 1..1731 1..1731 8655 100 Plus
Taf7-RB 2067 Taf7-RB 1..1510 222..1731 7550 100 Plus
CG2943.a 3337 CG2943.a 1..46 46..1 230 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:30:49
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 3733914..3735226 418..1730 6550 99.9 Plus
chr3R 27901430 chr3R 3733597..3733856 165..424 1300 100 Plus
chr3R 27901430 chr3R 3733369..3733533 1..165 825 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:05:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:30:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7907878..7909191 418..1731 6555 99.9 Plus
3R 32079331 3R 7907561..7907820 165..424 1300 100 Plus
3R 32079331 3R 7907333..7907497 1..165 825 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:40:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 7648709..7650022 418..1731 6555 99.9 Plus
3R 31820162 3R 7648392..7648651 165..424 1300 100 Plus
3R 31820162 3R 7648164..7648328 1..165 825 100 Plus
Blast to na_te.dros performed 2019-03-16 16:30:47
Subject Length Description Subject Range Query Range Score Percent Strand
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 3967..4006 312..351 128 80 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 1770..1809 312..351 119 77.5 Plus
TART-C 11124 TART-C TARTC 11124bp 3223..3262 312..351 119 77.5 Plus

FI01305.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:32:02 Download gff for FI01305.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 3733369..3733533 1..165 100 -> Plus
chr3R 3733598..3733855 166..423 100 -> Plus
chr3R 3733920..3735226 424..1730 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:20:19 Download gff for FI01305.complete
Subject Subject Range Query Range Percent Splice Strand
Taf7-RA 1..1440 229..1668 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:15:01 Download gff for FI01305.complete
Subject Subject Range Query Range Percent Splice Strand
Taf7-RA 1..1440 229..1668 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:50:45 Download gff for FI01305.complete
Subject Subject Range Query Range Percent Splice Strand
Taf7-RA 1..1440 229..1668 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:31:04 Download gff for FI01305.complete
Subject Subject Range Query Range Percent Splice Strand
Taf7-RA 1..1440 229..1668 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:58:24 Download gff for FI01305.complete
Subject Subject Range Query Range Percent Splice Strand
Taf7-RA 1..1730 1..1730 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:20:19 Download gff for FI01305.complete
Subject Subject Range Query Range Percent Splice Strand
Taf7-RA 1..1730 1..1730 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:15:01 Download gff for FI01305.complete
Subject Subject Range Query Range Percent Splice Strand
Taf7-RA 1..1730 1..1730 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:50:46 Download gff for FI01305.complete
Subject Subject Range Query Range Percent Splice Strand
Taf7-RA 1..1730 1..1730 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:31:04 Download gff for FI01305.complete
Subject Subject Range Query Range Percent Splice Strand
Taf7-RA 1..1730 1..1730 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:32:02 Download gff for FI01305.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7907562..7907819 166..423 100 -> Plus
3R 7907333..7907497 1..165 100 -> Plus
3R 7907884..7909190 424..1730 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:32:02 Download gff for FI01305.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7907562..7907819 166..423 100 -> Plus
3R 7907333..7907497 1..165 100 -> Plus
3R 7907884..7909190 424..1730 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:32:02 Download gff for FI01305.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7907562..7907819 166..423 100 -> Plus
3R 7907333..7907497 1..165 100 -> Plus
3R 7907884..7909190 424..1730 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:15:01 Download gff for FI01305.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3733055..3733219 1..165 100 -> Plus
arm_3R 3733284..3733541 166..423 100 -> Plus
arm_3R 3733606..3734912 424..1730 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:08:48 Download gff for FI01305.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7648393..7648650 166..423 100 -> Plus
3R 7648715..7650021 424..1730 100   Plus
3R 7648164..7648328 1..165 100 -> Plus

FI01305.pep Sequence

Translation from 228 to 1667

> FI01305.pep
MPSLAVPHLTPISNEHLVSSKEVVFFWKNRIEMFEKKSDKVKQAEHKARD
DGVELESQFIMRVPKELADTVHEAINAGTIKDRLTIQLDPDLRYGEVRID
DQILYTKLVDLPTVVESYKTIDNKSFYKSADICQILICKEEREDETEKES
PNKNKKKDPNKVDKKYLFPHGITPPCKNVRKRRFRKTLKKKNVEAPEIEK
EVKHLLRIDNEAVRVDYEIINEEDKPMDELEQSDIKPYNDADDDLQDEST
MHASEKTIMEMSSQRHLQVESDDDEASNFPSHRAPNMGVAVHDIFGEEVS
STDDEDEPDRGNNTMQRRVMEESSRLSADDSRMSDFFGASGSNTGAGVVK
MEQNVFSKSMFGHEASSPKLSAAGSSSNLAAPSGFYDSQMLAKREEFENM
EFIDEPQPQYTQQQVQQKINQLTRQIRELKAQQVQKSTEIASIQNATLKQ
RMQETLDNLYTQVIERELELKDFENMLES*

FI01305.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:46:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18179-PA 442 GF18179-PA 1..442 33..479 1748 80.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:46:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14274-PA 447 GG14274-PA 1..447 33..479 2085 95.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:46:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19771-PA 439 GH19771-PA 1..438 33..478 1808 81.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:29
Subject Length Description Subject Range Query Range Score Percent Strand
Taf7-PA 479 CG2670-PA 1..479 1..479 2451 100 Plus
Taf7-PB 447 CG2670-PB 1..447 33..479 2283 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:46:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20310-PA 439 GI20310-PA 1..438 33..478 1597 74 Plus
Dmoj\GI21631-PA 864 GI21631-PA 16..113 54..151 278 53.1 Plus
Dmoj\GI21631-PA 864 GI21631-PA 774..838 161..223 199 52.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:46:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12464-PA 416 GL12464-PA 1..416 33..479 1689 77.5 Plus
Dper\GL14320-PA 195 GL14320-PA 16..188 51..224 431 52.6 Plus
Dper\GL13294-PA 152 GL13294-PA 16..140 51..177 322 52.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:46:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15419-PA 449 GA15419-PA 1..449 33..479 1865 83.3 Plus
Dpse\GA25066-PA 195 GA25066-PA 16..188 51..224 431 52.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:46:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10983-PA 399 GM10983-PA 1..399 33..479 2026 87.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:46:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19957-PA 425 GD19957-PA 1..425 33..479 2160 92.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:46:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22037-PA 449 GJ22037-PA 1..448 33..478 1774 81.7 Plus
Dvir\GJ16863-PA 362 GJ16863-PA 15..144 51..181 358 55 Plus
Dvir\GJ16863-PA 362 GJ16863-PA 256..337 143..222 206 58.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:46:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12030-PA 443 GK12030-PA 1..443 33..479 1754 80.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:46:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24953-PA 447 GE24953-PA 1..447 33..479 2062 94.9 Plus
Dyak\GE11189-PA 80 GE11189-PA 1..80 400..479 394 98.8 Plus

FI01305.hyp Sequence

Translation from 228 to 1667

> FI01305.hyp
MPSLAVPHLTPISNEHLVSSKEVVFFWKNRIEMFEKKSDKVKQAEHKARD
DGVELESQFIMRVPKELADTVHEAINAGTIKDRLTIQLDPDLRYGEVRID
DQILYTKLVDLPTVVESYKTIDNKSFYKSADICQILICKEEREDETEKES
PNKNKKKDPNKVDKKYLFPHGITPPCKNVRKRRFRKTLKKKNVEAPEIEK
EVKHLLRIDNEAVRVDYEIINEEDKPMDELEQSDIKPYNDADDDLQDEST
MHASEKTIMEMSSQRHLQVESDDDEASNFPSHRAPNMGVAVHDIFGEEVS
STDDEDEPDRGNNTMQRRVMEESSRLSADDSRMSDFFGASGSNTGAGVVK
MEQNVFSKSMFGHEASSPKLSAAGSSSNLAAPSGFYDSQMLAKREEFENM
EFIDEPQPQYTQQQVQQKINQLTRQIRELKAQQVQKSTEIASIQNATLKQ
RMQETLDNLYTQVIERELELKDFENMLES*

FI01305.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:34:30
Subject Length Description Subject Range Query Range Score Percent Strand
Taf7-PA 479 CG2670-PA 1..479 1..479 2451 100 Plus
Taf7-PB 447 CG2670-PB 1..447 33..479 2283 100 Plus