Clone FI01414 Report

Search the DGRC for FI01414

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:14
Well:14
Vector:pFlc-1
Associated Gene/TranscriptMtr3-RA
Protein status:FI01414.pep: gold
Sequenced Size:1248

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Mtr3 2008-04-29 Release 5.5 accounting
Mtr3 2008-08-15 Release 5.9 accounting
Mtr3 2008-12-18 5.12 accounting

Clone Sequence Records

FI01414.complete Sequence

1248 bp assembled on 2007-09-04

GenBank Submission: BT030767

> FI01414.complete
GTCTTTAGACCACATGTGAACTCAGTTTGTTTATTTTTATATTCAATCAA
AAGATATAATATAAATATGCTAGCGGTGAACCAGACGAAGAACACCCTAC
TCGATGGAGCCTCCATTGAGGAAGAGCCGTACACAACTCCGCAGGAAAGC
GAGGATTTCTTTGAGAGTCTAGACAAACCGTCGAGGGAGCCAACACAACT
GGCACCCAGAAACACCTTCATCCGCGCCGGTGTGTTGACCACAGTGAGAG
GTTCCGCCTACATGGAGTATGGTAACACCAAGGTTCTGGCCATTGTGGCC
CCGCCAAAGGAGCTAATCCGCGCCAGCGCACGCAGAATGAACATGGGTGT
TCTGAATTGCTATGTGAATTTTGCGGCCTTCAGCACAGGGGATCTAGATT
CGGTGCCGGAACGGGAACGCCACCTGAGCAGCATGCTGACCAAGGCCATG
GAGCCGGTGGTGTGCCGCACGGAGTTCCTTAACTTTCAGCTGGACATACG
GGTGCTTATTCTCGACGATGACGGCTGCCTGCTCAGCACTGCCATCAATT
GCTGCGGAGTCGCTTTGGTGGAGTGCGGCATTTCCACTTACGACTTAATT
ACGGCCTCCACAGCTTGTATCTATCGGGATCACGTCTTCCTGAATCCCAG
TGCCAAGGTTGAGGAGCTGCTCTGGAAGCATCGCAACAGCAGCACCGATA
GCACAACCAGCCCATCATCCGCCCAGGAGCACGGCCTGATCATTACCGCC
AGCATGGATACCTTTGAACAGATCGCCCAGTGCCAGCAGTGCGGATATCT
CAGTCCAGCCACCTATGTAAAGCTGCTGGATTACACCCTGGCCATTAACA
AGTCCCTGAGAGAACTAGTCAAAGGCGTGCTCACGAAGCGGGTGAAGGAG
CAGCACGAACTAGATCTACGCGAGAAAGCCGAGACCGCTCTAGAAGATCA
GCGTTTGGAGGAAATAATCGAGAAGCTAAAGAAGCAAGGACCAGAGGAGT
TTATACAATCGAACATCCGGGAGGATCCCTATGTAAAGAGGCAGTAGTTG
GTTGAGAATAAATCATACTAATATAAATCCCAGATCTATTTGAACAACAA
CCACCACTTAAAAAATGATTACTACAAATATTTAGAGTCCAGATAAAACT
TTTATTCGTTATTTTTGCACTTCCAAAGTTCCGAATAGCTTCGAAAATAA
TAACATCAAATGCGTAGCGCGCTTCAAAACTTTAAAAAAAAAAAAAAA

FI01414.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:15:18
Subject Length Description Subject Range Query Range Score Percent Strand
Mtr3-RA 1236 Mtr3-RA 4..1236 1..1233 6165 100 Plus
CG7757.a 2075 CG7757.a 1974..2075 1235..1134 510 100 Minus
CG7757-RB 2079 CG7757-RB 1978..2079 1235..1134 510 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:15:55
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 19901732..19902747 1233..218 5080 100 Minus
chr3L 24539361 chr3L 19902806..19903022 217..1 1085 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:05:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:15:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19912403..19913420 1235..218 5090 100 Minus
3L 28110227 3L 19913479..19913695 217..1 1085 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:32:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 19905503..19906520 1235..218 5090 100 Minus
3L 28103327 3L 19906579..19906795 217..1 1085 100 Minus
Blast to na_te.dros performed 2019-03-17 00:15:54
Subject Length Description Subject Range Query Range Score Percent Strand
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 1062..1111 26..75 114 74.5 Plus
Doc 4725 Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). 2135..2180 1096..1141 113 71.7 Plus

FI01414.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:16:52 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 19901732..19902747 218..1233 100 <- Minus
chr3L 19902806..19903022 1..217 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:37:09 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
Mtr3-RA 1..981 67..1047 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:22:26 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
Mtr3-RA 1..981 67..1047 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:34:55 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
Mtr3-RA 1..981 67..1047 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:42:52 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
Mtr3-RA 1..981 67..1047 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:17:05 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
Mtr3-RA 1..981 67..1047 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:37:13 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
Mtr3-RA 1..1233 1..1233 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:22:26 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
Mtr3-RA 4..1236 1..1233 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:34:55 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
Mtr3-RA 21..1253 1..1233 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:42:52 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
Mtr3-RA 1..1233 1..1233 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:17:05 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
Mtr3-RA 21..1253 1..1233 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:16:52 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19912405..19913420 218..1233 100 <- Minus
3L 19913479..19913695 1..217 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:16:52 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19912405..19913420 218..1233 100 <- Minus
3L 19913479..19913695 1..217 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:16:52 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19912405..19913420 218..1233 100 <- Minus
3L 19913479..19913695 1..217 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:34:55 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19905505..19906520 218..1233 100 <- Minus
arm_3L 19906579..19906795 1..217 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:54:11 Download gff for FI01414.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19905505..19906520 218..1233 100 <- Minus
3L 19906579..19906795 1..217 100   Minus

FI01414.hyp Sequence

Translation from 1 to 1046

> FI01414.hyp
VFRPHVNSVCLFLYSIKRYNINMLAVNQTKNTLLDGASIEEEPYTTPQES
EDFFESLDKPSREPTQLAPRNTFIRAGVLTTVRGSAYMEYGNTKVLAIVA
PPKELIRASARRMNMGVLNCYVNFAAFSTGDLDSVPERERHLSSMLTKAM
EPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGVALVECGISTYDLI
TASTACIYRDHVFLNPSAKVEELLWKHRNSSTDSTTSPSSAQEHGLIITA
SMDTFEQIAQCQQCGYLSPATYVKLLDYTLAINKSLRELVKGVLTKRVKE
QHELDLREKAETALEDQRLEEIIEKLKKQGPEEFIQSNIREDPYVKRQ*

FI01414.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:10:45
Subject Length Description Subject Range Query Range Score Percent Strand
Mtr3-PA 326 CG8025-PA 1..326 23..348 1666 100 Plus
Ski6-PB 246 CG15481-PB 11..176 55..223 191 31.4 Plus
Ski6-PA 246 CG15481-PA 11..176 55..223 191 31.4 Plus

FI01414.pep Sequence

Translation from 66 to 1046

> FI01414.pep
MLAVNQTKNTLLDGASIEEEPYTTPQESEDFFESLDKPSREPTQLAPRNT
FIRAGVLTTVRGSAYMEYGNTKVLAIVAPPKELIRASARRMNMGVLNCYV
NFAAFSTGDLDSVPERERHLSSMLTKAMEPVVCRTEFLNFQLDIRVLILD
DDGCLLSTAINCCGVALVECGISTYDLITASTACIYRDHVFLNPSAKVEE
LLWKHRNSSTDSTTSPSSAQEHGLIITASMDTFEQIAQCQQCGYLSPATY
VKLLDYTLAINKSLRELVKGVLTKRVKEQHELDLREKAETALEDQRLEEI
IEKLKKQGPEEFIQSNIREDPYVKRQ*

FI01414.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:01:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10840-PA 325 GF10840-PA 1..324 1..325 1449 80.9 Plus
Dana\GF15621-PA 249 GF15621-PA 11..179 33..201 192 30.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:01:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13362-PA 319 GG13362-PA 1..319 1..326 1537 87.4 Plus
Dere\GG10219-PA 246 GG10219-PA 17..176 39..201 179 30.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:01:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16904-PA 331 GH16904-PA 1..331 1..325 1261 72.4 Plus
Dgri\GH10637-PA 249 GH10637-PA 17..179 39..201 187 30.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:25
Subject Length Description Subject Range Query Range Score Percent Strand
Mtr3-PA 326 CG8025-PA 1..326 1..326 1666 100 Plus
Ski6-PB 246 CG15481-PB 11..176 33..201 191 31.4 Plus
Ski6-PA 246 CG15481-PA 11..176 33..201 191 31.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:01:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13661-PA 329 GI13661-PA 1..329 1..325 1294 71.6 Plus
Dmoj\GI10716-PA 249 GI10716-PA 11..179 33..201 180 30.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:01:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22907-PA 328 GL22907-PA 1..328 1..325 1356 75.5 Plus
Dper\GL26697-PA 249 GL26697-PA 11..179 33..201 179 30.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:02:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20773-PA 328 GA20773-PA 1..328 1..325 1354 75.2 Plus
Dpse\GA13761-PA 249 GA13761-PA 11..179 33..201 179 30.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:02:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15571-PA 327 GM15571-PA 1..327 1..326 1591 94.5 Plus
Dsec\GM25757-PA 246 GM25757-PA 17..176 39..201 190 31.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:02:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12240-PA 327 GD12240-PA 1..327 1..326 1672 95.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:02:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13996-PA 329 GJ13996-PA 1..329 1..325 1360 74.9 Plus
Dvir\GJ18275-PA 249 GJ18275-PA 17..179 39..201 183 30.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:02:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17502-PA 326 GK17502-PA 1..326 1..325 1291 72.5 Plus
Dwil\GK15569-PA 251 GK15569-PA 17..181 39..201 188 31.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:02:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22455-PA 328 GE22455-PA 1..328 1..326 1594 91.2 Plus
Dyak\GE23007-PA 328 GE23007-PA 1..328 1..326 1592 91.2 Plus
Dyak\GE11809-PA 246 GE11809-PA 17..176 39..201 181 30.7 Plus