Clone FI01421 Report

Search the DGRC for FI01421

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:14
Well:21
Vector:pFlc-1
Associated Gene/TranscriptCG12911-RA
Protein status:FI01421.pep: gold
Sequenced Size:1610

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12911 2008-04-29 Release 5.5 accounting
CG12911 2008-08-15 Release 5.9 accounting
CG12911 2008-12-18 5.12 accounting

Clone Sequence Records

FI01421.complete Sequence

1610 bp assembled on 2007-09-05

GenBank Submission: BT030770

> FI01421.complete
ATCATTCGCGGTCCGTCGCCAGTTCGAGAAGCTTTGGCTCGTTGTGATAC
AGGTGATACAGTGTGAAAGGATACGTTCGGCTTCACCACCACCAATTGGA
GAGGCACAACGTGTGCCAGGTGCTAAAATTGTGATCGATTCGGTGGAGCC
ATTTGAAGAGGGAACACCATGAGTGCTATGTTGTTGATATCCTGCCTGAC
GCTGCTCGTCTGTGTCCAGGCAGCGGTGACAGGGCCGGAAGCTCGATCCA
GTGTGGACGCCAAGGATCAGCAGCTGGCTACAGCGAGTGTTGGAATCCTC
GACTCCGTGCTTCGAGGAAAGAGCCGCCAGTCGCGGTGCGTGAGATGCTA
CGAGGATCGGGATCGTGATAGGTACTACAGCGGATACTCCAGTCGAACGG
GCGACGATATGCGAGGTAGTGCCTGGTACTACTCCGGCTACGATGATCGC
AGCAGGGATCGGGACTACGATCGCTACTACGATCGCTCCCGTTATTACGA
AGATCGCTATACTCCGAGAACATACGACCGCTATGAGGGTCGTGGCTATG
ATGATTATAGAAGGGGATCTGCGTATGGAGGATCATACGATCGGGAACGC
GGATATGGATACGACAACCGGGATCGGTACTACAGTGGTGATCGCTACAG
CGAGGGGTTATCCAGAGATCGCTACTACGATCGCTCGAGGACAAGCGGGT
ATGATCGTTATGATCCGTACGATCGCTACTACTCCAGGGGCCAGTCCGGT
TTTGATAACTCCGGACGAGGCTATTACTTTGCCACCGACGAGGATGAAAG
CGACAGGAATCGAGGATATGGCTACTCCTACACTCGTCCCTCCTCCTCAA
TGAGCTCGCCCTGCGGACGCATTTCCGGAAATTGTCCCTATGCCGGTGGC
TCCAAGGTCACCTCACCCGCCATTGGCAGCGACAGTTCGCGAGTGGGAGG
CCATACCAATGTCCTGGGATCGGATGGAGGTCCTGGCAGTTGGAGTTATC
TGGGTGATCAGGAGAAGGTCGGTGGAAGCAGCAGTGGCAGCGGCGGTGGT
AGCAGCAGCAGCAGCAGCGGCAGTAGCAGCAGCAGCAGCTCAAGCGGCAG
CGGCGGCAGTCGGGAGAGGGAGCGGGAACGGGACAGGGAGCGGGATGCAC
AGAGGCTTGCCCTCTTGTCACCCCTTGTAGCTCTTCCTATGGTGGCCGAC
CACGTCCTCTAGGCGTTAGCTATCTGCTTGAACGGGACGCGGATACTCCG
TCGGATGGCCCAGGAAACACGGCGAGTGCCGCCGGAAATGGTGGAAGTAA
TGGTGGTGGTGCTACGGGCCAGAGCATGCCCATCCCAGCTGCCCAGACAG
CCGTCGAGGGAACTTCCGGCGCAACCGAGCAGTAACTGGACAAGAACGCA
GAACCATATACAGGTCCAAATCCAGGGACAGACGCAGTGCAGCGGCTGGG
AGAGACGCTCGCCCGCCCGGTGGGCGTGGCTGATCTTTGTGTAACCTACC
GACCGTATTTATGTTTAATCGTAAGCTAAGTCTCCAAAGAAACTATTTAT
GTGTGGCACAGCTTTGCTCAAATAAACAATTTTCAAAGATCCTCAAAAAA
AAAAAAAAAA

FI01421.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:15:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG12911.g 1932 CG12911.g 120..1716 1..1597 7985 100 Plus
CG12911.d 2124 CG12911.d 120..1716 1..1597 7985 100 Plus
CG12911-RB 1853 CG12911-RB 866..1728 735..1597 4315 100 Plus
CG12911-RB 1853 CG12911-RB 90..827 1..738 3690 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:09:02
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 6146505..6146986 186..667 2320 98.8 Plus
chr2R 21145070 chr2R 6148370..6148811 1153..1594 2090 98.2 Plus
chr2R 21145070 chr2R 6147543..6147965 733..1155 2085 99.5 Plus
chr2R 21145070 chr2R 6144222..6144407 1..186 930 100 Plus
chr2R 21145070 chr2R 6147049..6147121 666..738 365 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:05:55 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:01
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10258970..10259451 186..667 2410 100 Plus
2R 25286936 2R 10260835..10261279 1153..1597 2225 100 Plus
2R 25286936 2R 10260008..10260430 733..1155 2115 100 Plus
2R 25286936 2R 10256689..10256874 1..186 930 100 Plus
2R 25286936 2R 10259514..10259586 666..738 365 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:33:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 10260169..10260650 186..667 2410 100 Plus
2R 25260384 2R 10262034..10262478 1153..1597 2225 100 Plus
2R 25260384 2R 10261207..10261629 733..1155 2115 100 Plus
2R 25260384 2R 10257888..10258073 1..186 930 100 Plus
2R 25260384 2R 10260713..10260785 666..738 365 100 Plus
Blast to na_te.dros performed on 2019-03-16 06:09:01 has no hits.

FI01421.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:09:52 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 6144222..6144407 1..186 100 -> Plus
chr2R 6146506..6146986 187..667 98 -> Plus
chr2R 6147051..6147120 668..737 100 -> Plus
chr2R 6147548..6147964 738..1154 99 -> Plus
chr2R 6148372..6148811 1155..1594 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:37:24 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
CG12911-RA 1..1044 169..1212 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:22:52 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
CG12911-RA 1..1044 169..1212 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:56:31 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
CG12911-RA 1..1044 169..1212 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:17:45 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
CG12911-RA 1..1044 169..1212 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:12:31 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
CG12911-RA 1..1044 169..1212 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:38:40 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
CG12911-RA 1..1594 1..1594 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:22:52 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
CG12911-RA 1..1594 1..1594 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:56:31 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
CG12911-RA 4..1597 1..1594 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 17:08:00 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
CG12911-RA 1..1594 1..1594 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:12:31 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
CG12911-RA 4..1597 1..1594 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:52 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10256689..10256874 1..186 100 -> Plus
2R 10258971..10259451 187..667 100 -> Plus
2R 10259516..10259585 668..737 100 -> Plus
2R 10260013..10260429 738..1154 100 -> Plus
2R 10260837..10261276 1155..1594 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:52 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10256689..10256874 1..186 100 -> Plus
2R 10258971..10259451 187..667 100 -> Plus
2R 10259516..10259585 668..737 100 -> Plus
2R 10260013..10260429 738..1154 100 -> Plus
2R 10260837..10261276 1155..1594 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:52 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10256689..10256874 1..186 100 -> Plus
2R 10258971..10259451 187..667 100 -> Plus
2R 10259516..10259585 668..737 100 -> Plus
2R 10260013..10260429 738..1154 100 -> Plus
2R 10260837..10261276 1155..1594 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:56:31 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6144194..6144379 1..186 100 -> Plus
arm_2R 6146476..6146956 187..667 100 -> Plus
arm_2R 6147021..6147090 668..737 100 -> Plus
arm_2R 6147518..6147934 738..1154 100 -> Plus
arm_2R 6148342..6148781 1155..1594 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:54:40 Download gff for FI01421.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10260170..10260650 187..667 100 -> Plus
2R 10260715..10260784 668..737 100 -> Plus
2R 10261212..10261628 738..1154 100 -> Plus
2R 10262036..10262475 1155..1594 100   Plus
2R 10257888..10258073 1..186 100 -> Plus

FI01421.hyp Sequence

Translation from 168 to 1211

> FI01421.hyp
MSAMLLISCLTLLVCVQAAVTGPEARSSVDAKDQQLATASVGILDSVLRG
KSRQSRCVRCYEDRDRDRYYSGYSSRTGDDMRGSAWYYSGYDDRSRDRDY
DRYYDRSRYYEDRYTPRTYDRYEGRGYDDYRRGSAYGGSYDRERGYGYDN
RDRYYSGDRYSEGLSRDRYYDRSRTSGYDRYDPYDRYYSRGQSGFDNSGR
GYYFATDEDESDRNRGYGYSYTRPSSSMSSPCGRISGNCPYAGGSKVTSP
AIGSDSSRVGGHTNVLGSDGGPGSWSYLGDQEKVGGSSSGSGGGSSSSSS
GSSSSSSSSGSGGSRERERERDRERDAQRLALLSPLVALPMVADHVL*

FI01421.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:10:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG12911-PA 347 CG12911-PA 1..347 1..347 1849 100 Plus
CG12911-PB 361 CG12911-PB 1..361 1..347 1824 96.1 Plus
CG12911-PC 396 CG12911-PC 1..328 1..328 1759 100 Plus
CG12911-PD 410 CG12911-PD 1..342 1..328 1734 95.9 Plus
CG12911-PE 257 CG12911-PE 1..240 1..240 1040 82.1 Plus

FI01421.pep Sequence

Translation from 168 to 1211

> FI01421.pep
MSAMLLISCLTLLVCVQAAVTGPEARSSVDAKDQQLATASVGILDSVLRG
KSRQSRCVRCYEDRDRDRYYSGYSSRTGDDMRGSAWYYSGYDDRSRDRDY
DRYYDRSRYYEDRYTPRTYDRYEGRGYDDYRRGSAYGGSYDRERGYGYDN
RDRYYSGDRYSEGLSRDRYYDRSRTSGYDRYDPYDRYYSRGQSGFDNSGR
GYYFATDEDESDRNRGYGYSYTRPSSSMSSPCGRISGNCPYAGGSKVTSP
AIGSDSSRVGGHTNVLGSDGGPGSWSYLGDQEKVGGSSSGSGGGSSSSSS
GSSSSSSSSGSGGSRERERERDRERDAQRLALLSPLVALPMVADHVL*

FI01421.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:08:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12787-PA 403 GF12787-PA 1..279 1..279 1002 83.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:08:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24154-PA 399 GG24154-PA 1..284 1..284 1116 91.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:08:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21776-PA 428 GH21776-PA 1..303 1..283 566 52.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:27:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG12911-PA 347 CG12911-PA 1..347 1..347 1849 100 Plus
CG12911-PB 361 CG12911-PB 1..361 1..347 1824 96.1 Plus
CG12911-PC 396 CG12911-PC 1..328 1..328 1759 100 Plus
CG12911-PD 410 CG12911-PD 1..342 1..328 1734 95.9 Plus
CG12911-PE 257 CG12911-PE 1..240 1..240 1040 82.1 Plus
CG12911-PF 271 CG12911-PF 1..190 1..190 1035 100 Plus
CG30122-PD 1271 CG30122-PD 867..1098 73..328 156 28 Plus
CG30122-PB 1271 CG30122-PB 867..1098 73..328 156 28 Plus
CG30122-PC 1272 CG30122-PC 867..1098 73..328 156 28 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:08:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19323-PA 404 GI19323-PA 41..404 13..347 708 56 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:08:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11585-PA 429 GL11585-PA 1..314 7..283 872 69 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:08:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11902-PA 437 GA11902-PA 1..322 1..283 880 68.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:08:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21198-PA 346 GM21198-PA 1..346 1..347 1634 96.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:08:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10726-PA 395 GD10726-PA 1..327 1..328 1541 96.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:08:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22201-PA 414 GJ22201-PA 11..293 12..283 610 59.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:08:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17785-PA 399 GK17785-PA 1..275 1..282 521 60.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:08:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19349-PA 397 GE19349-PA 1..283 1..283 1124 92.9 Plus