Clone FI01442 Report

Search the DGRC for FI01442

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:14
Well:42
Vector:pFlc-1
Associated Gene/TranscriptCG10395-RD
Protein status:FI01442.pep: gold
Sequenced Size:1422

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10395 2008-04-29 Release 5.5 accounting
CG10395 2008-08-15 Release 5.9 accounting
CG10395 2008-12-18 5.12 accounting

Clone Sequence Records

FI01442.complete Sequence

1422 bp assembled on 2007-09-06

GenBank Submission: BT030779

> FI01442.complete
ATTCTGTGAATTGCTTAAATGCATTTAGGAAGGGGAATACAAAAATATAT
TGTGCACAATTCAAATTTTTTTTAGTATTATTATTATAATTATAATCATT
ATAAGTTTAAAATCATTATACTATGTGGCCAGAGAGATTGCACGATTTTC
CCAGCCGTTTAATAAGGATGTCATTTGTGGAATTAGGCTATAAGCATCGT
AGTGGATGTATGACCAATGCAATTTTTGGACATTTGAAAAAATTAAGCAT
AACAAACAAAAATATTGGCCGCTGCTACAGGACGAGTGTATTTCAATTGA
AATGGTGAAAGAAGGTTCTAAGGATGCAGAGTACTTATCTGCTGAGTCTA
TTTCAAATTCGTTGAGACCTAAAGAACTTCATTACACTACAGATGCGCTT
GCATCTAATTCAAATATTCATGAACATCCTCTTAGACGCACGAGAAATAT
TAGCACAAAAAAATTGGCACATGATGACAGTTTGCCTCACACGGGTGCTA
AAAAAGGTAAAAGACGACGCAACAGTGATACGTCCAGTGAAGAGGATCGG
TGGCTTACCGCCATAGAAACCGGGAAACTAGACGTTGTTGATGAGGAACT
TAAAAAGATAAAGGACCCCAAACTTATGACAGCACGTCAACGTGCTATTT
ATGAACGGACACAGGACTCCGAAATAAATGGATTTATAGAAGAGCTAATT
GCTCTTCCAAGTGGTTATAAAGAAAAGGAAAAGCCGCAGACTGCGGAGGA
AATTCATAAAGCTCTTCTGAAATCTCAAAAACGAAAACAACAAGCTGACG
AACGCAGAGAAAAAGATAAATTAAAGACAATGGAGCGGTTGTTAAAAAAA
CAGGCAACCAACAGGGATCGGATTTCAATTCGCAATAAGTCTTTACAACA
GCCCTCTTATCCAAAAATAACCTATATAAGTGCTGTAACTGGCAACTATG
TAATAGTTCCCCCAGGTTACGAATATCCTTTAAAAGTTCAACTCCCTCGT
ACACCTCCTCCTTCACAGGTGTGCTTTGTAAGCGGTTGTGAAAATCGCAA
GACATATAATTGTTCAACAACAAATGTTCCATTATGTAGTCTTACATGTT
ATCGTAAGAATATCAACAAAATAAGAAAAACGTCTACAAATACGTAGATT
TAATTTTAATATTGATTGACAAAAAATTGTTTATTATTTCATGTTGCTCC
GTTTCAATTCGCTGTAAAAACTGCAATTCGCCTTTTAAGCGTTCAAGTTC
TACTGTTTGCTCAAATATCTCATATTGATAGACTTGCTGCTTGTTCTGGC
GCTGAATAAATGCCGTTTTTAATTGATTTTGAGTACCAATAGCGCGTAGT
TTTTCCTTATCGACATCTTTGGCAAACGTTTCAGAAATATTACAATAATT
AAACACAAAAAAAAAAAAAAAA

FI01442.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:15:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG10395-RA 1454 CG10395-RA 91..1425 76..1409 6635 99.9 Plus
CG30441-RB 410 CG30441-RB 148..410 1409..1148 1275 99.6 Minus
CG10395-RA 1454 CG10395-RA 1..118 1..120 500 95.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:52:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 1238294..1239388 313..1406 5395 99.7 Plus
chr2R 21145070 chr2R 1237909..1238239 1..316 1395 95.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:06:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:52:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 5350878..5351975 313..1409 5440 99.9 Plus
2R 25286936 2R 5350493..5350823 1..316 1395 95.5 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 5352077..5353174 313..1409 5450 99.9 Plus
2R 25260384 2R 5351782..5352022 76..316 1205 100 Plus
2R 25260384 2R 5351692..5351809 1..120 500 95.8 Plus
Blast to na_te.dros performed 2019-03-16 05:52:37
Subject Length Description Subject Range Query Range Score Percent Strand
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 3..69 123..59 158 74.6 Minus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 7041..7107 123..59 158 74.6 Minus
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 1161..1244 44..126 137 67.1 Plus
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 1092..1145 70..124 128 72.7 Plus
accord2 7650 accord2 QBERT 7650bp 6257..6299 66..108 125 76.7 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 32..88 119..64 120 70.2 Minus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 7070..7126 119..64 120 70.2 Minus
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 926..998 1209..1139 117 64.4 Minus
accord2 7650 accord2 QBERT 7650bp 6571..6643 55..130 112 63.2 Plus

FI01442.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:53:41 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 1237909..1237979 1..71 100 == Plus
chr2R 1238026..1238237 103..314 100 -> Plus
chr2R 1238296..1239388 315..1406 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:37:52 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
CG10395-RA 1..942 206..1147 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:23:13 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
CG10395-RA 1..942 206..1147 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:29:26 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
CG10395-RA 1..942 206..1147 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:43:41 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
CG10395-RA 1..942 206..1147 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:09:05 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
CG10395-RD 1..846 302..1147 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:39:47 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
CG10395-RA 1..74 1..74 100 -> Plus
CG10395-RA 91..1422 75..1406 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:23:13 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
CG10395-RA 1..74 1..74 100 -> Plus
CG10395-RA 91..1422 75..1406 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:29:26 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
CG10395-RA 17..90 1..74 100 -> Plus
CG10395-RA 107..1438 75..1406 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:43:41 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
CG10395-RA 1..74 1..74 100 -> Plus
CG10395-RA 91..1422 75..1406 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:09:05 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
CG10395-RE 17..90 1..74 100 -> Plus
CG10395-RE 107..1438 75..1406 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:53:41 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5350493..5350566 1..74 100 -> Plus
2R 5350583..5350821 75..314 99 -> Plus
2R 5350880..5351972 315..1406 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:53:41 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5350493..5350566 1..74 100 -> Plus
2R 5350583..5350821 75..314 99 -> Plus
2R 5350880..5351972 315..1406 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:53:41 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5350493..5350566 1..74 100 -> Plus
2R 5350583..5350821 75..314 99 -> Plus
2R 5350880..5351972 315..1406 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:29:26 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 1237998..1238071 1..74 100 -> Plus
arm_2R 1238088..1238326 75..314 99 -> Plus
arm_2R 1238385..1239477 315..1406 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:55:04 Download gff for FI01442.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5351782..5352020 75..314 99 -> Plus
2R 5352079..5353171 315..1406 99   Plus
2R 5351692..5351765 1..74 100 -> Plus

FI01442.pep Sequence

Translation from 205 to 1146

> FI01442.pep
MYDQCNFWTFEKIKHNKQKYWPLLQDECISIEMVKEGSKDAEYLSAESIS
NSLRPKELHYTTDALASNSNIHEHPLRRTRNISTKKLAHDDSLPHTGAKK
GKRRRNSDTSSEEDRWLTAIETGKLDVVDEELKKIKDPKLMTARQRAIYE
RTQDSEINGFIEELIALPSGYKEKEKPQTAEEIHKALLKSQKRKQQADER
REKDKLKTMERLLKKQATNRDRISIRNKSLQQPSYPKITYISAVTGNYVI
VPPGYEYPLKVQLPRTPPPSQVCFVSGCENRKTYNCSTTNVPLCSLTCYR
KNINKIRKTSTNT*

FI01442.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:15:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20009-PA 167 GF20009-PA 1..162 141..303 540 61.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:15:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23156-PA 176 GG23156-PA 1..175 141..310 790 87.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:15:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21736-PA 313 GH21736-PA 79..313 78..306 752 61.7 Plus
Dgri\GH23731-PA 273 GH23731-PA 39..273 78..306 751 61.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:12:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG10395-PE 281 CG10395-PE 1..281 33..313 1453 100 Plus
CG10395-PD 281 CG10395-PD 1..281 33..313 1453 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:15:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18879-PA 168 GI18879-PA 1..165 141..303 577 65.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:15:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11052-PA 179 GL11052-PA 1..165 141..303 631 67.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:15:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10297-PA 179 GA10297-PA 1..165 141..303 631 67.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:15:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11102-PA 177 GM11102-PA 1..177 141..313 829 89.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:15:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10370-PA 177 GD10370-PA 1..177 141..313 840 91.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:15:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21913-PA 169 GJ21913-PA 1..169 141..306 586 66.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:15:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21947-PA 314 GK21947-PA 62..310 64..310 763 62.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:15:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11367-PA 168 GE11367-PA 1..163 141..303 798 91.4 Plus

FI01442.hyp Sequence

Translation from 205 to 1146

> FI01442.hyp
MYDQCNFWTFEKIKHNKQKYWPLLQDECISIEMVKEGSKDAEYLSAESIS
NSLRPKELHYTTDALASNSNIHEHPLRRTRNISTKKLAHDDSLPHTGAKK
GKRRRNSDTSSEEDRWLTAIETGKLDVVDEELKKIKDPKLMTARQRAIYE
RTQDSEINGFIEELIALPSGYKEKEKPQTAEEIHKALLKSQKRKQQADER
REKDKLKTMERLLKKQATNRDRISIRNKSLQQPSYPKITYISAVTGNYVI
VPPGYEYPLKVQLPRTPPPSQVCFVSGCENRKTYNCSTTNVPLCSLTCYR
KNINKIRKTSTNT*

FI01442.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:11:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG10395-PE 281 CG10395-PE 1..281 33..313 1453 100 Plus
CG10395-PD 281 CG10395-PD 1..281 33..313 1453 100 Plus