Clone FI01447 Report

Search the DGRC for FI01447

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:14
Well:47
Vector:pFlc-1
Associated Gene/TranscriptCG5254-RA
Protein status:FI01447.pep: gold
Sequenced Size:1250

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5254 2008-04-29 Release 5.5 accounting
CG5254 2008-08-15 Release 5.9 accounting
CG5254 2008-12-18 5.12 accounting

Clone Sequence Records

FI01447.complete Sequence

1250 bp assembled on 2007-09-05

GenBank Submission: BT030781

> FI01447.complete
AGTGTGGCTTTTTCTTCTGGAACACAAGCAGCTGCCTCAACCTCGAGCTC
AGTGCGAATTGCGTTCTCGAAGCGAGCGGTGTCGGTTGTTGACCCGTAGT
GTTCTAGTTGGGGTATTTGGATTCAGTAGTAGCAGTAGCGTCGTAAGGAT
GGCCGGACAGCAGCACGATATTTCGCACGCCAAGCGGGCCGCCTTTCAGG
TTTTGGCCGGCGGCTCGGCCGGATTCCTGGAGGTCTGCATCATGCAACCA
CTCGATGTAGTCAAAACTCGCATCCAGATCCAGGCCACTCCCGCGCCGAA
TGCCGCAGCTCTTGGTGAGGTGCACTACAATGGCGTCTTCGATTGCTTCG
CCAAGATGTACCGCCACGAGGGCATCTCCTCCTACTGGAAGGGCATCATG
CCGCCAATCCTGGCCGAGACGCCCAAGCGGGCCATCAAGTTCCTGGTGTT
CGAGCAGACGAAGCCGCTCTTTCAATTCGGCTCGCCCACTCCCACGCCGC
TGACCTTTTCTCTGGCTGGACTGACAGCCGGCACACTGGAAGCCATAGCC
GTGAATCCCTTCGAGGTGGTGAAGGTGGCCCAGCAGGCTGATCGCCAAAA
AAAGATGCTCAGCACGTTCGCCGTGGCCAAGGGTATCATACAGCAGGACG
GATTGGGCTTCAGCGGCCTCAACAAGGGCATCACCGCCACCATGGGACGC
AATGGAGTCTTCAACATGGTGTACTTCGGGTTCTACCACAGCGTGAAGAA
CGTGGTGCCCGAGTACAAGGAGAGCCATTTGGAGTTTCTGCGCAAGGTGA
CCATCGGCTTCCTGGCCGGCACTCTGGCCTGCTTCGTCAACATCCCATTC
GACGTGGCCAAGTCACGCATCCAGGGACCGCAACCGGTCCCCGGGCAGAT
AAAATACCGAGGAACCCTCAGCTCCATGGGCATCGTCTACCGCGAGGAAG
GATTCCGAGCGCTGTACAAAGGGCTCGTTCCCAAGATTATGCGTTTGGGC
CCAGGTGGAGCTATTCTGCTGCTGGTCTTCGAGTACTCCTACGATTACCT
GCTCCACAACTACTCCTAGTCCTTAAGTCCTCAAGAGGCAAGCGCCTTCT
TTGTTTTTTTGTATAATAGTAAGTCGATTAGTCGCGATCAATGCCATCAA
GGGGATGCTACTCTTCCGATTGTGATTCGTCAATAAATGTATTTTTACTT
TGTGTTGAAAATAAATAATCAATGATATTTTTAGAAAAAAAAAAAAAAAA

FI01447.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:15:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG5254-RA 1346 CG5254-RA 107..1344 1..1238 6190 100 Plus
CG5254.a 1362 CG5254.a 447..1362 319..1234 4580 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:02:55
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 651764..652680 318..1234 4585 100 Plus
chrX 22417052 chrX 650149..650470 1..322 1610 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:06:12 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:02:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 757803..758723 318..1238 4605 100 Plus
X 23542271 X 756188..756509 1..322 1610 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:33:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 765901..766821 318..1238 4605 100 Plus
X 23527363 X 764286..764607 1..322 1610 100 Plus
Blast to na_te.dros performed 2019-03-16 16:02:54
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker2 7672 Stalker2 STALKER2 7672bp 1488..1555 1232..1169 115 66.2 Minus

FI01447.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:03:39 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 650149..650467 1..319 100 -> Plus
chrX 651766..652680 320..1234 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:37:55 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
CG5254-RA 1..921 149..1069 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:23:01 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
CG5254-RA 1..921 149..1069 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:26:58 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
CG5254-RA 1..921 149..1069 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:43:27 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
CG5254-RA 1..921 149..1069 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:55:00 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
CG5254-RA 1..921 149..1069 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:39:07 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
CG5254-RA 1..1234 1..1234 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:23:01 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
CG5254-RA 1..1234 1..1234 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:26:58 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
CG5254-RA 3..1236 1..1234 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:43:28 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
CG5254-RA 1..1234 1..1234 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:55:00 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
CG5254-RA 3..1236 1..1234 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:03:39 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
X 756188..756506 1..319 100 -> Plus
X 757805..758719 320..1234 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:03:39 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
X 756188..756506 1..319 100 -> Plus
X 757805..758719 320..1234 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:03:39 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
X 756188..756506 1..319 100 -> Plus
X 757805..758719 320..1234 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:26:58 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 650221..650539 1..319 100 -> Plus
arm_X 651838..652752 320..1234 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:54:51 Download gff for FI01447.complete
Subject Subject Range Query Range Percent Splice Strand
X 764286..764604 1..319 100 -> Plus
X 765903..766817 320..1234 100   Plus

FI01447.hyp Sequence

Translation from 1 to 1068

> FI01447.hyp
VWLFLLEHKQLPQPRAQCELRSRSERCRLLTRSVLVGVFGFSSSSSVVRM
AGQQHDISHAKRAAFQVLAGGSAGFLEVCIMQPLDVVKTRIQIQATPAPN
AAALGEVHYNGVFDCFAKMYRHEGISSYWKGIMPPILAETPKRAIKFLVF
EQTKPLFQFGSPTPTPLTFSLAGLTAGTLEAIAVNPFEVVKVAQQADRQK
KMLSTFAVAKGIIQQDGLGFSGLNKGITATMGRNGVFNMVYFGFYHSVKN
VVPEYKESHLEFLRKVTIGFLAGTLACFVNIPFDVAKSRIQGPQPVPGQI
KYRGTLSSMGIVYREEGFRALYKGLVPKIMRLGPGGAILLLVFEYSYDYL
LHNYS*

FI01447.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:11:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG5254-PA 306 CG5254-PA 1..306 50..355 1585 100 Plus
CG5254-PB 237 CG5254-PB 1..237 119..355 1228 100 Plus
CG9582-PB 300 CG9582-PB 13..295 63..350 770 52.1 Plus
CG9582-PA 300 CG9582-PA 13..295 63..350 770 52.1 Plus
CG18418-PA 311 CG18418-PA 21..281 70..334 305 30.1 Plus

FI01447.pep Sequence

Translation from 148 to 1068

> FI01447.pep
MAGQQHDISHAKRAAFQVLAGGSAGFLEVCIMQPLDVVKTRIQIQATPAP
NAAALGEVHYNGVFDCFAKMYRHEGISSYWKGIMPPILAETPKRAIKFLV
FEQTKPLFQFGSPTPTPLTFSLAGLTAGTLEAIAVNPFEVVKVAQQADRQ
KKMLSTFAVAKGIIQQDGLGFSGLNKGITATMGRNGVFNMVYFGFYHSVK
NVVPEYKESHLEFLRKVTIGFLAGTLACFVNIPFDVAKSRIQGPQPVPGQ
IKYRGTLSSMGIVYREEGFRALYKGLVPKIMRLGPGGAILLLVFEYSYDY
LLHNYS*

FI01447.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:10:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21179-PA 331 GF21179-PA 33..331 8..306 1416 90.6 Plus
Dana\GF22093-PA 302 GF22093-PA 12..301 12..306 767 49.2 Plus
Dana\GF24720-PA 300 GF24720-PA 16..271 19..285 303 30 Plus
Dana\GF24719-PA 300 GF24719-PA 16..271 19..285 302 30.7 Plus
Dana\GF20410-PA 381 GF20410-PA 26..357 17..303 302 26.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:10:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12807-PA 306 GG12807-PA 1..306 1..306 1583 97.7 Plus
Dere\GG24039-PA 300 GG24039-PA 6..295 7..301 823 53.6 Plus
Dere\GG14152-PA 461 GG14152-PA 105..435 17..303 325 28.1 Plus
Dere\GG14165-PA 310 GG14165-PA 21..281 21..285 324 30.9 Plus
Dere\GG17216-PA 317 GG17216-PA 37..310 18..299 295 31.4 Plus
Dere\GG14152-PA 461 GG14152-PA 236..405 4..188 152 25.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:10:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17661-PA 308 GH17661-PA 7..308 4..306 1229 74.9 Plus
Dgri\GH13646-PA 313 GH13646-PA 19..313 7..306 827 51.3 Plus
Dgri\GH15793-PA 310 GH15793-PA 20..288 21..294 326 31.3 Plus
Dgri\GH23534-PA 315 GH23534-PA 11..289 8..285 321 30.7 Plus
Dgri\GH18316-PA 398 GH18316-PA 36..371 6..303 305 26.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG5254-PA 306 CG5254-PA 1..306 1..306 1585 100 Plus
CG5254-PB 237 CG5254-PB 1..237 70..306 1228 100 Plus
CG9582-PB 300 CG9582-PB 13..295 14..301 770 52.1 Plus
CG9582-PA 300 CG9582-PA 13..295 14..301 770 52.1 Plus
CG2616-PB 449 CG2616-PB 93..423 17..303 307 26.8 Plus
CG2616-PA 449 CG2616-PA 93..423 17..303 307 26.8 Plus
aralar1-PB 679 CG2139-PB 326..598 14..295 306 29.4 Plus
aralar1-PD 682 CG2139-PD 329..601 14..295 306 29.4 Plus
aralar1-PA 682 CG2139-PA 329..601 14..295 306 29.4 Plus
aralar1-PF 694 CG2139-PF 329..601 14..295 306 29.4 Plus
aralar1-PC 695 CG2139-PC 342..614 14..295 306 29.4 Plus
aralar1-PE 707 CG2139-PE 354..626 14..295 306 29.4 Plus
CG18418-PA 311 CG18418-PA 21..281 21..285 305 30.1 Plus
GC2-PB 319 CG12201-PB 23..293 17..285 300 30.5 Plus
Shawn-PE 387 CG14209-PE 42..369 17..303 298 26.6 Plus
Shawn-PD 387 CG14209-PD 42..369 17..303 298 26.6 Plus
Shawn-PC 387 CG14209-PC 42..369 17..303 298 26.6 Plus
Shawn-PB 387 CG14209-PB 42..369 17..303 298 26.6 Plus
CG7514-PA 301 CG7514-PA 19..282 21..295 294 29 Plus
sea-PE 317 CG6782-PE 37..310 18..299 290 31 Plus
sea-PD 317 CG6782-PD 37..310 18..299 290 31 Plus
sea-PC 317 CG6782-PC 37..310 18..299 290 31 Plus
sea-PA 317 CG6782-PA 37..310 18..299 290 31 Plus
GC1-PB 321 CG18347-PB 24..298 17..285 288 30.4 Plus
GC1-PA 321 CG18347-PA 24..298 17..285 288 30.4 Plus
CG1907-PA 317 CG1907-PA 18..298 15..295 264 28.9 Plus
MME1-PA 299 CG3476-PA 19..297 19..301 262 28.9 Plus
colt-PD 306 CG3057-PD 20..286 19..288 249 29.5 Plus
colt-PA 306 CG3057-PA 20..286 19..288 249 29.5 Plus
Tpc2-PB 323 CG2857-PB 12..300 17..295 242 28.6 Plus
Ucp4A-PB 340 CG6492-PB 60..329 34..295 241 26.8 Plus
Ucp4A-PA 340 CG6492-PA 60..329 34..295 241 26.8 Plus
Ucp4B-PA 337 CG18340-PA 56..326 34..295 238 27.6 Plus
CG1628-PC 305 CG1628-PC 20..297 19..297 234 26.8 Plus
CG1628-PB 459 CG1628-PB 174..451 19..297 234 26.8 Plus
sesB-PE 299 CG16944-PE 16..293 20..295 231 24.5 Plus
sesB-PB 299 CG16944-PB 16..293 20..295 231 24.5 Plus
sesB-PA 299 CG16944-PA 16..293 20..295 231 24.5 Plus
sesB-PD 312 CG16944-PD 29..306 20..295 231 24.5 Plus
sesB-PC 312 CG16944-PC 29..306 20..295 231 24.5 Plus
Rim2-PC 358 CG18317-PC 12..338 18..295 229 26 Plus
Ant2-PC 307 CG1683-PC 7..306 3..300 227 23.4 Plus
Ant2-PB 307 CG1683-PB 7..306 3..300 227 23.4 Plus
Ant2-PA 307 CG1683-PA 7..306 3..300 227 23.4 Plus
CG4995-PB 399 CG4995-PB 37..215 114..296 225 33 Plus
CG4995-PA 399 CG4995-PA 37..215 114..296 225 33 Plus
CG4995-PD 360 CG4995-PD 6..176 122..296 224 33.9 Plus
CG4995-PC 360 CG4995-PC 6..176 122..296 224 33.9 Plus
CG8026-PD 322 CG8026-PD 26..307 18..302 223 25.8 Plus
Rim2-PA 365 CG18317-PA 12..345 18..295 222 25.4 Plus
CG8026-PB 304 CG8026-PB 26..300 18..295 218 25.3 Plus
CG8026-PD 322 CG8026-PD 1..203 84..295 170 25.9 Plus
CG8026-PB 304 CG8026-PB 1..203 84..295 170 25.9 Plus
CG4995-PD 360 CG4995-PD 9..271 19..299 160 25.5 Plus
CG4995-PC 360 CG4995-PC 9..271 19..299 160 25.5 Plus
CG4995-PB 399 CG4995-PB 48..310 19..299 160 25.5 Plus
CG4995-PA 399 CG4995-PA 48..310 19..299 160 25.5 Plus
Shawn-PE 387 CG14209-PE 173..342 6..174 153 27.2 Plus
Shawn-PD 387 CG14209-PD 173..342 6..174 153 27.2 Plus
Shawn-PC 387 CG14209-PC 173..342 6..174 153 27.2 Plus
Shawn-PB 387 CG14209-PB 173..342 6..174 153 27.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:10:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21513-PA 310 GI21513-PA 11..310 8..306 1319 81.7 Plus
Dmoj\GI11946-PA 269 GI11946-PA 1..268 32..306 730 49.5 Plus
Dmoj\GI11957-PA 273 GI11957-PA 1..272 26..306 716 47.3 Plus
Dmoj\GI11116-PA 405 GI11116-PA 24..367 13..303 315 28.3 Plus
Dmoj\GI12576-PA 310 GI12576-PA 20..280 21..285 311 30.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:10:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21377-PA 310 GL21377-PA 7..310 4..306 1467 90.8 Plus
Dper\GL25542-PA 294 GL25542-PA 17..293 13..305 745 51.9 Plus
Dper\GL17935-PA 312 GL17935-PA 22..282 21..285 328 30.5 Plus
Dper\GL27057-PA 407 GL27057-PA 42..370 17..303 312 26.8 Plus
Dper\GL22258-PA 315 GL22258-PA 29..298 30..294 290 30.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:10:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18765-PA 310 GA18765-PA 7..310 4..306 1467 90.8 Plus
Dpse\GA21892-PA 305 GA21892-PA 17..304 13..305 856 56.3 Plus
Dpse\GA20405-PA 312 GA20405-PA 22..282 21..285 324 30.2 Plus
Dpse\GA17262-PA 407 GA17262-PA 42..370 17..303 317 27.1 Plus
Dpse\GA15263-PA 689 GA15263-PA 329..614 9..295 297 30.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:10:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19087-PA 306 GM19087-PA 1..306 1..306 1598 98.4 Plus
Dsec\GM12561-PA 300 GM12561-PA 1..295 1..301 781 50.5 Plus
Dsec\GM10970-PA 450 GM10970-PA 94..424 17..303 326 28.8 Plus
Dsec\GM13955-PA 311 GM13955-PA 21..281 21..285 304 29.4 Plus
Dsec\GM13956-PA 301 GM13956-PA 19..272 21..285 298 31.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16525-PA 306 GD16525-PA 1..306 1..306 1598 98.4 Plus
Dsim\GD22366-PA 300 GD22366-PA 1..295 1..301 779 50.5 Plus
Dsim\GD19943-PA 450 GD19943-PA 94..424 17..303 325 27.8 Plus
Dsim\GD13238-PA 311 GD13238-PA 21..281 21..285 302 29.4 Plus
Dsim\GD13239-PA 301 GD13239-PA 17..272 19..285 297 30.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19052-PA 311 GJ19052-PA 7..311 4..306 1368 83 Plus
Dvir\GJ14089-PA 312 GJ14089-PA 19..312 7..306 846 53.3 Plus
Dvir\GJ15480-PA 311 GJ15480-PA 21..281 21..285 315 30.8 Plus
Dvir\GJ10949-PA 402 GJ10949-PA 49..376 17..303 311 27.1 Plus
Dvir\GJ15972-PA 402 GJ15972-PA 28..371 13..303 298 26.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:10:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16434-PA 305 GK16434-PA 1..305 1..306 1381 84.7 Plus
Dwil\GK23706-PA 298 GK23706-PA 11..292 14..300 893 58.2 Plus
Dwil\GK13128-PA 679 GK13128-PA 316..601 9..295 311 31.2 Plus
Dwil\GK25201-PA 392 GK25201-PA 32..356 17..303 303 27.6 Plus
Dwil\GK11062-PA 461 GK11062-PA 97..435 13..303 299 26.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:10:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16633-PA 306 GE16633-PA 1..306 1..306 1587 98 Plus
Dyak\GE10632-PA 300 GE10632-PA 13..299 14..305 807 53.1 Plus
Dyak\GE11166-PA 449 GE11166-PA 93..423 17..303 324 27.3 Plus
Dyak\GE23386-PA 682 GE23386-PA 316..601 9..295 304 30.5 Plus
Dyak\GE20592-PA 313 GE20592-PA 16..289 16..294 303 29 Plus