Clone FI01513 Report

Search the DGRC for FI01513

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:15
Well:13
Vector:pFlc-1
Associated Gene/TranscriptIrbp-RA
Protein status:FI01513.pep: gold
Sequenced Size:2161

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Irbp 2008-08-15 Release 5.9 accounting
Irbp 2008-12-18 5.12 accounting

Clone Sequence Records

FI01513.complete Sequence

2161 bp assembled on 2008-07-31

GenBank Submission: BT044080.1

> FI01513.complete
AGGATAACAACAGCGACGATAAGCGCGCCCGCCTTCTTGTGAAATTAGCG
GAAAGTCAGATTTTTAGCAATCTAAAGAAGCCGCATAATGAGCACCTGGA
ATCCGGAGAACGATGTGGACCTGCTGTCTGGGTCCGAGGACGAGGAGGAT
GTGTCCATGAAGCGGGACTACCATGGGCGCGAGGCCATTCTGTTCGTGGT
AGACGCCAATCTTCAGACAGCCGGCGTGGAGCGCCTGTTGGAGGCACTGA
ACATCATCCGGACGGCCTTTATATCCGGACTTCTGGTTAACGACAAGGAC
CTCATCGGACTCATCTTCGCCAACACCAAGCACAGTCCGCCGCCGCTGGA
AGCCAGTGCATTGGACAACATCGTAATGCCGGATAACTGCGCAGTGTTCT
TGCCCCTTCGCCAACTAACCAAACCCATTGTGGAGCACTATCTGGAATTC
ATGGGCGGGGTGGAGACGCAGTTCGCCGATGTGTATGGCCTGGCGGAACC
CGATGGTCGCGGCAGGTTTGACCTTATGATCCGGCTCTGCATCGAGATGC
TGGAAAAGTGCGGCAAGAAGCTAAACAACGCCAAGATCGCCTATGTCACG
GACGTCAGGGAACCTCATCCATCGAACAGCAATCACTTCCAGGCTGCCCT
GCAAAAGGCCAGCGATCTGGAGGGCAAGGAGTTCGAGTTTCATGTCATTC
CCATGGTCGATGACTTTGACTACGAGCCGTTTTACAAGGAGTTCATCACG
TTGTCAAGAGCTATCGAACTGGACGCCTTCCAGGTGCCAGATGCCCAGAT
GCTGCGCGAAATCCTGTCCGATCGTAAGTTGAAGCAGGATTTCCTTCGCC
GATGCCTGGGCCACTTCAGTTTTTATCTGGGCCCCAACCTATCCATGTCC
GTACAGTACTACAATTACTTTCAGCGACGCGCCTATCCGCGCAAAGTGCA
AATCCTGCGCAGGGACAACAGTGTGGTGCGTACTAAGCGAGTGATTACGG
TGCAAAAACAAAAGGACGATGGCTCGCAGGATATCGAGCACGAGTATCAG
ATTAAGGTGACGGGCGGTTGGTACACTTGCAACGTGGGCGAAAGGGATCT
GCGCATCAGCATGGATCAGTTGAACAGGGTGCGCAATCTGCACAAGCCGC
AAATGATGCTGCTGGGCTTCAAGCATCGATCCTCTCTTCCCGAAGTTAGC
TACATCAAGCCAGCGAATTTCATGTACCCCGATGATCAGAGCATCATCGG
ATCGAAGCGCTTGTTCCGCGCATTGTGGGAACGATGCTTGGTGCGCGACA
AGATTGCCATTTGCCTGTTCATGTGCAAGCGCAAGTCGATACCTCGCTAT
GTGGCACTTGTGCCAGTAGAGGCCCCAGATAATGGGGAAGATAAGAACTA
TCGCTCTCTGCTCTGCGGTGACGGATTCAAGATTGTCTACTTGCCGGAGG
CCAAGCACATCCGCCACCTAGACTTGCAGGACTGGAACAATACGGAAAAC
ACTGCTGACGAACAGAAAGTCGAGTTTTTCCAAAAGATCATCAAGAAGCT
GCGCGTTGACTATCAGCCGAATCTCATCAACGATCCAAGTCTGGACGCCC
TGCAGGCGAATCTTCTGGCCCTCTCCCTGGACTTTTCGACAGATACTAAA
GGACTCGATAATCTGCTGGACACTTCGCAACAGGACAAGCGCATAGAAAA
GCTGCTGCCGGACTATGAAATGTTCGCTCCGGAAGCAGAACCCCATAAGA
AGCGAGCAGCCAAGTCCACCACAGCGGGAGCGAGCGGTCCCAAAATGGCC
AAGATCGATGATGATCAACTCAAGGAATTCGAATTCGTAAAGAGCCTGAA
CAAGGATGAGGCTCTGACGAGTTGCACGGCCGCCCAGTTGCATTTTATTC
TGCAGCATCACTTCGATGTTACAATGCCCAAGTCGTCAAAGAAGGCAAAA
CTGGTCGCCAAAATCGAGGAACTACATAAGTAATTAAAATATTCCATACT
TTGAGTGATAAATCTGTACCAATCTAGCTTGTATTAACCATTGGTAAACT
TAGGATTAGAAAATAATGTTTTGTTGTCCGAATTGTTAATTAAATACATA
CCAACACATAATTACTTGTAAAATAAATTATTAAAATGTTGTTTTAAAAA
AAAAAAAAAAA

FI01513.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:07:06
Subject Length Description Subject Range Query Range Score Percent Strand
Irbp-RA 2151 Irbp-RA 9..2151 3..2145 10715 100 Plus
Irbp.a 2024 Irbp.a 826..2024 947..2145 5995 100 Plus
Irbp.a 2024 Irbp.a 5..825 3..823 4105 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:06:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 7236524..7237910 759..2145 6920 99.9 Plus
chr3R 27901430 chr3R 7235523..7236280 3..760 3775 99.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:06:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:06:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11411054..11412448 759..2153 6975 100 Plus
3R 32079331 3R 11410053..11410810 3..760 3790 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:25:17
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 11151885..11153279 759..2153 6975 100 Plus
3R 31820162 3R 11150884..11151641 3..760 3790 100 Plus
Blast to na_te.dros performed on 2019-03-16 21:06:51 has no hits.

FI01513.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:07:33 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 7235520..7236280 1..760 99 -> Plus
chr3R 7236526..7237879 761..2114 99 <- Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:38:10 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
Irbp-RA 1..1896 88..1983 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:10:21 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
Irbp-RA 1..1896 88..1983 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:47:12 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
Irbp-RA 1..1896 88..1983 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:29 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
Irbp-RA 1..1896 88..1983 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:06:30 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
Irbp-RA 1..1896 88..1983 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:49:57 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
Irbp-RA 2..2147 1..2145 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:10:20 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
Irbp-RA 3..2148 1..2145 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:12 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
Irbp-RA 4..2149 1..2145 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-31 11:07:11 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
Irbp-RA 2..2147 1..2145 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:06:30 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
Irbp-RA 4..2149 1..2145 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:07:33 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11410050..11410810 1..760 99 -> Plus
3R 11411056..11412440 761..2145 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:07:33 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11410050..11410810 1..760 99 -> Plus
3R 11411056..11412440 761..2145 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:07:33 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11410050..11410810 1..760 99 -> Plus
3R 11411056..11412440 761..2145 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:12 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7235772..7236532 1..760 99 -> Plus
arm_3R 7236778..7238162 761..2145 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:40:21 Download gff for FI01513.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11150881..11151641 1..760 99 -> Plus
3R 11151887..11153271 761..2145 100   Plus

FI01513.pep Sequence

Translation from 87 to 1982

> FI01513.pep
MSTWNPENDVDLLSGSEDEEDVSMKRDYHGREAILFVVDANLQTAGVERL
LEALNIIRTAFISGLLVNDKDLIGLIFANTKHSPPPLEASALDNIVMPDN
CAVFLPLRQLTKPIVEHYLEFMGGVETQFADVYGLAEPDGRGRFDLMIRL
CIEMLEKCGKKLNNAKIAYVTDVREPHPSNSNHFQAALQKASDLEGKEFE
FHVIPMVDDFDYEPFYKEFITLSRAIELDAFQVPDAQMLREILSDRKLKQ
DFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVVRTK
RVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGERDLRISMDQLNRVRN
LHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRALWERC
LVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRSLLCGDGFKIV
YLPEAKHIRHLDLQDWNNTENTADEQKVEFFQKIIKKLRVDYQPNLINDP
SLDALQANLLALSLDFSTDTKGLDNLLDTSQQDKRIEKLLPDYEMFAPEA
EPHKKRAAKSTTAGASGPKMAKIDDDQLKEFEFVKSLNKDEALTSCTAAQ
LHFILQHHFDVTMPKSSKKAKLVAKIEELHK*

FI01513.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:37:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16859-PA 631 GF16859-PA 1..629 1..629 2683 77.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:37:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18111-PA 631 GG18111-PA 1..630 1..630 3110 92.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:37:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18304-PA 624 GH18304-PA 1..622 1..629 2337 68.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:13:30
Subject Length Description Subject Range Query Range Score Percent Strand
Irbp-PA 631 CG5247-PA 1..631 1..631 3289 100 Plus
Irbp-PB 265 CG5247-PB 1..245 1..245 1268 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:37:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24114-PA 631 GI24114-PA 1..627 1..629 2377 69.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:37:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12608-PA 633 GL12608-PA 1..626 1..629 2556 75.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:37:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18760-PA 633 GA18760-PA 1..626 1..629 2554 75.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:37:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23941-PA 630 GM23941-PA 1..630 1..631 3246 95.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:37:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18751-PA 631 GD18751-PA 1..629 1..630 3225 95.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:37:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10937-PA 624 GJ10937-PA 1..622 1..629 2301 69.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:37:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11797-PA 630 GK11797-PA 1..628 1..629 2335 70.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:37:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26092-PA 631 GE26092-PA 1..630 1..630 3147 91.6 Plus

FI01513.hyp Sequence

Translation from 87 to 1982

> FI01513.hyp
MSTWNPENDVDLLSGSEDEEDVSMKRDYHGREAILFVVDANLQTAGVERL
LEALNIIRTAFISGLLVNDKDLIGLIFANTKHSPPPLEASALDNIVMPDN
CAVFLPLRQLTKPIVEHYLEFMGGVETQFADVYGLAEPDGRGRFDLMIRL
CIEMLEKCGKKLNNAKIAYVTDVREPHPSNSNHFQAALQKASDLEGKEFE
FHVIPMVDDFDYEPFYKEFITLSRAIELDAFQVPDAQMLREILSDRKLKQ
DFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVVRTK
RVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGERDLRISMDQLNRVRN
LHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRALWERC
LVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRSLLCGDGFKIV
YLPEAKHIRHLDLQDWNNTENTADEQKVEFFQKIIKKLRVDYQPNLINDP
SLDALQANLLALSLDFSTDTKGLDNLLDTSQQDKRIEKLLPDYEMFAPEA
EPHKKRAAKSTTAGASGPKMAKIDDDQLKEFEFVKSLNKDEALTSCTAAQ
LHFILQHHFDVTMPKSSKKAKLVAKIEELHK*

FI01513.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:13:03
Subject Length Description Subject Range Query Range Score Percent Strand
Irbp-PA 631 CG5247-PA 1..631 1..631 3289 100 Plus
Irbp-PB 265 CG5247-PB 1..245 1..245 1268 100 Plus