Clone FI01540 Report

Search the DGRC for FI01540

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:15
Well:40
Vector:pFlc-1
Associated Gene/TranscriptEap-RA
Protein status:FI01540.pep: gold
Sequenced Size:852

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Eap 2008-04-29 Release 5.5 accounting
Eap 2008-08-15 Release 5.9 accounting
Eap 2008-12-18 5.12 accounting

Clone Sequence Records

FI01540.complete Sequence

852 bp assembled on 2007-09-06

GenBank Submission: BT030793

> FI01540.complete
AGCAATATCACGATGGCCAGTGATTCTGGCAGCGATTATGAGGTGGAGGC
TTTCTTCAATCCCAAGCGAGTTCAACGCACAGTCAACGACGACAGTGCGG
ATCTATTGGGAAACTTCGATGACCAGAAGCGAAGGGAGATCTTCGAGGGC
ACGTATGTGGACAAGGAGGACGGACGGAATCCCAGTGACCCGGAGGATAG
TAAGAGCGAGGATGAGGCCAAGTCCGACGACGAGGCAGCCGCTGAGGGCA
GTGCTGCTTCCGGAGCCGAGGAAGAGGAATCTGCGGAAAATGGGCAGATA
ACCAGTGACCAGCTGAGTTCACTGCTTCGAGGAGCCTCCAAAACCAACAG
ACACGTCCTGTACGTGACGAACCTGAACTTCGAAACCACAAAGGACGACC
TGGAGCTGCACTTCTCTGCGGCAGGCACGGTCAAGTCTATCCGCATTCCC
AAGAAGCGACGAGGGGGCTTCGCCTTTGTGGAAATGGCCGACCTAAGCAG
TTTCCAGAATGCCTTCCAGCTGCACAACACAGAGCTGCAGGGACGCAACA
TCAAGGTGCAGATCTCCGAGGCGGGCAAGAAGAAGTCGGCCAACAAGAAG
AACATCATCAAACAGAAGAACCGAAAGCTGGCCGAGATGCGCAACGAGCA
GAAGACCTTCACGAAGAGCGGCAAGTTTTACGACAAGGACCTGAAAAAGG
AGAAGGCCAAGGAAATGCTGGCGCGAAAGCGGTGGCGCAAAAAGCCCGCC
CCCAGACCCACATAAATAGCATAAGTTCTTACAATGTAAGCCATTCTATG
ATTATTTAACAACAATTAAAAGTTAACATTACCGCAAAAAAAAAAAAAAA
AA

FI01540.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:15:50
Subject Length Description Subject Range Query Range Score Percent Strand
cg3594-RA 840 cg3594-RA 5..835 4..834 4155 100 Plus
CG16912-RA 1572 CG16912-RA 1500..1572 834..762 365 100 Minus
CG16912.a 1513 CG16912.a 1455..1513 834..776 295 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:07:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 20666890..20667720 4..834 4155 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:06:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:07:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24780949..24781779 4..834 4155 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:33:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 24782148..24782978 4..834 4155 100 Plus
Blast to na_te.dros performed on 2019-03-16 00:07:08 has no hits.

FI01540.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:08:03 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 20666887..20667720 1..835 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:38:12 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 1..753 13..765 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:23:14 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 1..753 13..765 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:33:56 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 1..753 13..765 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:43:42 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 1..753 13..765 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:58:17 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 1..753 13..765 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:39:54 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 2..835 1..835 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:23:14 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 2..835 1..835 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:33:56 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 30..863 1..834 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:43:43 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 2..835 1..835 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:58:17 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 30..863 1..834 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:08:03 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24780946..24781779 1..835 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:08:03 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24780946..24781779 1..835 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:08:03 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24780946..24781779 1..835 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:33:56 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20668469..20669302 1..835 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:55:05 Download gff for FI01540.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24782163..24782996 1..835 99   Plus

FI01540.hyp Sequence

Translation from 1 to 764

> FI01540.hyp
RNITMASDSGSDYEVEAFFNPKRVQRTVNDDSADLLGNFDDQKRREIFEG
TYVDKEDGRNPSDPEDSKSEDEAKSDDEAAAEGSAASGAEEEESAENGQI
TSDQLSSLLRGASKTNRHVLYVTNLNFETTKDDLELHFSAAGTVKSIRIP
KKRRGGFAFVEMADLSSFQNAFQLHNTELQGRNIKVQISEAGKKKSANKK
NIIKQKNRKLAEMRNEQKTFTKSGKFYDKDLKKEKAKEMLARKRWRKKPA
PRPT*

FI01540.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:13:22
Subject Length Description Subject Range Query Range Score Percent Strand
Eap-PA 250 CG3594-PA 1..250 5..254 1271 100 Plus

FI01540.pep Sequence

Translation from 12 to 764

> FI01540.pep
MASDSGSDYEVEAFFNPKRVQRTVNDDSADLLGNFDDQKRREIFEGTYVD
KEDGRNPSDPEDSKSEDEAKSDDEAAAEGSAASGAEEEESAENGQITSDQ
LSSLLRGASKTNRHVLYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKRR
GGFAFVEMADLSSFQNAFQLHNTELQGRNIKVQISEAGKKKSANKKNIIK
QKNRKLAEMRNEQKTFTKSGKFYDKDLKKEKAKEMLARKRWRKKPAPRPT
*

FI01540.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:15:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13340-PA 251 GF13340-PA 1..250 1..248 1002 81 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:15:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23005-PA 250 GG23005-PA 1..250 1..250 1145 94.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:15:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20357-PA 263 GH20357-PA 14..261 9..248 939 75 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG3594-PA 250 CG3594-PA 1..250 1..250 1271 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:15:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20026-PA 261 GI20026-PA 8..260 3..248 902 72.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:15:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16773-PA 251 GL16773-PA 1..251 1..250 1025 80.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:15:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17545-PA 251 GA17545-PA 1..251 1..250 1023 80.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:15:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11898-PA 250 GM11898-PA 1..250 1..250 1265 96.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:15:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11896-PA 250 GD11896-PA 1..250 1..250 1278 97.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:15:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21274-PA 260 GJ21274-PA 14..259 9..246 942 76.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:15:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21670-PA 255 GK21670-PA 2..253 3..249 866 75.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:15:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14442-PA 250 GE14442-PA 1..250 1..250 1170 96 Plus