Clone FI01543 Report

Search the DGRC for FI01543

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:15
Well:43
Vector:pFlc-1
Associated Gene/TranscriptCG13183-RA
Protein status:FI01543.pep: gold
Sequenced Size:2224

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13183 2008-08-15 Release 5.9 accounting
CG13183 2008-12-18 5.12 accounting

Clone Sequence Records

FI01543.complete Sequence

2224 bp assembled on 2008-08-11

GenBank Submission: BT044081.1

> FI01543.complete
GGTCGAAACACGCAGCTTGAGGCGAGCGGTTCTTGCGCGCGCTTCCAAAC
CGCCTAACTACCTAACTCTTTAACAGCGAGCAGCTACTAACCCACAGCAG
AGGCTCAGTAGAAGTCGTTATCGCATCGAAATCGTTAAAATCGTCGCGAA
CGCAGAGTTCTGAGAGTGTTGTGCCCCATAGAGATTGGAAGACAAATGAT
ATAATATTTAAAGAATAAAAAACAGTACATAATTGTGGAGAAACCTGGCT
GGTTGATCGAGTGTAGGCGTTACAAGTACAATTCTGATTTGCACTTGGAA
ATAAATCCAGCACCGATCAGGGAACATACGGATACCCAAACGACGTATTG
CACTTGGAAGCAGGAGGAAACGAATCAAGCGATCAGACCGACAAGATGAT
TTCTCGCCGCAAGATCATATCGCGCTCCCTAGACAATTTGGATGCCATCG
GGCAGGAAGAGCAGGAGGAAGACGTCTGGCACGATCGCGAAAAGCTCTTC
AGGGATCACATCAACGAGGTTCTGTCCAAGTGGGAGCAAATCGACGACGA
GATCTGGGCCAAGATAATTGTCTTCGAGAAAAATCGGCGAGTGGCCAAGG
CCTACGCCCGCTCCTCTGTGATAACCATAAATGGATCTAAGAATGGATTC
GATGGAGTGCGTATTGGGCTGAATGGCTTCGATAATCCGATGCGCGATGC
GGAGACGAAGGTGATCAAAAAGTCCATCGGCGATGGATTCAAGATCAAAA
TGGACGACACCGGCAACATATTCATCAAGCGGTATGGCAAGAGCAGCATC
TACGTGAACAGCACATCGCAGGGCAACGAGGAGACGGTGATCGGTGGCGA
CATAATCCAAATGCCGCAGATGTCCCTCACCGCGGCCACCTCCGCTCGAC
TCTTTGATATGAAGAAGTTCCAGACGAACATAAACCGCGAGTTTGCCCGC
ACTTATCCGGAGCGCGGAAGACTGGAACGGCAGTGCCTGTCCGCCGTATC
GCTTGTCAAGTCGAACAACAATCTTATCAACTCTCCGGTCTGGATACTCG
TGGTCAACGTGGTGGCCATGGACATGCTGAGGAGCCGCCTCCAAACGATT
CCCAAGTCACTGGATGCGATGGGCATGCGAGTGCCGCTGACGAACAGCAG
CGAGGATCCATACTCCACCATCGAAAGCCAAGTGGGATTGATCTATCCTA
CGCCCGCCGCGTCGGATGATTCCCAGAACTCCCAGCACTCGAGCAACTCC
AGCAAGGGACGGCGCAGCATCTTTAGTGCCGCCTTCCTCAACGAGGGTCC
ATATGTGCCCAAGCCCGACTACGAATCTGGCGGATCTTTGACGCCCATAT
ATGCGGACAAGAAGCGACAGAAGAGCAGCGGGTCGCAGCAGCGGAAGAAG
CAGGATGATCCGTACTACTGCGGACTCTTGGCGCGTATTCCCAACTTCAT
CAAGTCCTCGAAGCAGCCGTGCCCTGGAGGAGCCAGCAAGCCCAAGAAGG
AGCCAAAGATCTCGCGGAAGATCTCGGCACAGCACCAGCAACAGCAGTTC
CTGCAGCCGGCGCAACCCATTCCCATTGCCACATTCCACCACTCGTACTT
CCCCTACAAACTGTATCCACCGCAGCACCGTCTCTCCCAGTCGCAAATGT
CCCTCTGGGATGCACGTAGTCTGATCAGCGCACATGAATGATCACTTTGG
CTGGCCCTAATTTATTCATCGTCTAGCGTTAATTCTAAAATTATTTAGTC
AAAGCCTACGATTAAGTTTGGTCAGTGAAGGATCATCGATTCACTGGATC
ACTGTGGAGTGCATTTCGCTCAGTTTTGTGATAAATGCAGCGAAATGCAG
CCATTTAGCGTACGTCACTTAATACGCACTAACTCTAATTAACCGCAGTT
AACTTTAAGTCAAGCAGAGAGATTTAATGATTATGCAATTTGTAATGAGT
AATTAAAATTTTGCCATAGTTTCTTAAATCGTTTAAGACTGAGAGAATGT
CCTAGAGCCCACGATAAGCGCACGGAGAGTTTGGCTGAGATTCAGGATGG
GGGCAGATAATGTCATATGCAAATTAATTGCTACTTTAGGCAAGTTCAAT
TTATTATTTTCTTATTATTTTTCTGTACATACACTTCATATGTAAATAAG
ATCAAATTAAAAACATGTAATCGATATTAGTACGCATTAAAAAAGAGTTA
TGAAAGCCAAAAAAAAAAAAAAAA

FI01543.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:06:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG13183-RA 2520 CG13183-RA 314..2518 2..2206 11010 99.9 Plus
CG13188-RB 2917 CG13188-RB 930..1085 537..692 300 79.4 Plus
CG13188-RA 3906 CG13188-RA 930..1085 537..692 300 79.4 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:37:48
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 7792673..7793325 1313..661 3235 99.7 Minus
chr2R 21145070 chr2R 7791603..7792123 2206..1686 2605 100 Minus
chr2R 21145070 chr2R 7792184..7792558 1686..1312 1845 99.5 Minus
chr2R 21145070 chr2R 7799682..7800044 364..2 1800 99.7 Minus
chr2R 21145070 chr2R 7793387..7793545 661..503 780 99.4 Minus
chr2R 21145070 chr2R 7793617..7793757 504..364 705 100 Minus
chr2R 21145070 chr2R 7842841..7842941 537..637 220 81.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:06:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:37:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11905395..11906047 1313..661 3265 100 Minus
2R 25286936 2R 11904321..11904845 2210..1686 2610 99.8 Minus
2R 25286936 2R 11904906..11905280 1686..1312 1875 100 Minus
2R 25286936 2R 11912413..11912775 364..2 1800 99.7 Minus
2R 25286936 2R 11906109..11906267 661..503 795 100 Minus
2R 25286936 2R 11906339..11906479 504..364 705 100 Minus
2R 25286936 2R 11955618..11955718 537..637 235 82.2 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:24:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 11906594..11907246 1313..661 3265 100 Minus
2R 25260384 2R 11905520..11906044 2210..1686 2610 99.8 Minus
2R 25260384 2R 11906105..11906479 1686..1312 1875 100 Minus
2R 25260384 2R 11913612..11913974 364..2 1800 99.7 Minus
2R 25260384 2R 11907308..11907466 661..503 795 100 Minus
2R 25260384 2R 11907538..11907678 504..364 705 100 Minus
2R 25260384 2R 11956817..11956917 537..637 235 82.1 Plus
Blast to na_te.dros performed 2019-03-16 06:37:46
Subject Length Description Subject Range Query Range Score Percent Strand
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 4308..4397 2157..2066 122 62.4 Minus
gypsy12 10218 gypsy12 GYPSY12 10218bp 1081..1163 1921..2006 116 62.8 Plus
gypsy12 10218 gypsy12 GYPSY12 10218bp 8963..9045 1921..2006 116 62.8 Plus

FI01543.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:38:46 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 7791601..7792122 1687..2208 99 <- Minus
chr2R 7792184..7792556 1314..1686 99 <- Minus
chr2R 7792673..7793324 662..1313 99 <- Minus
chr2R 7793387..7793544 504..661 99 <- Minus
chr2R 7793618..7793756 365..503 100 <- Minus
chr2R 7799682..7800044 1..364 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:38:14 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
CG13183-RA 1..1296 396..1691 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:09:50 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
CG13183-RA 1..1296 396..1691 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:33:15 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
CG13183-RA 1..1296 396..1691 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:17 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
CG13183-RA 1..1296 396..1691 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:18:32 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
CG13183-RA 1..1296 396..1691 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:49:14 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
CG13183-RA 1..2207 2..2208 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:09:50 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
CG13183-RA 1..2207 2..2208 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:33:15 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
CG13183-RA 4..2211 1..2208 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:29:29 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
CG13183-RA 1..2207 2..2208 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:18:32 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
CG13183-RA 4..2211 1..2208 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:38:46 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11904323..11904844 1687..2208 99 <- Minus
2R 11904906..11905278 1314..1686 100 <- Minus
2R 11905395..11906046 662..1313 100 <- Minus
2R 11906109..11906266 504..661 100 <- Minus
2R 11906340..11906478 365..503 100 <- Minus
2R 11912413..11912775 1..364 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:38:46 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11904323..11904844 1687..2208 99 <- Minus
2R 11904906..11905278 1314..1686 100 <- Minus
2R 11905395..11906046 662..1313 100 <- Minus
2R 11906109..11906266 504..661 100 <- Minus
2R 11906340..11906478 365..503 100 <- Minus
2R 11912413..11912775 1..364 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:38:46 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11904323..11904844 1687..2208 99 <- Minus
2R 11904906..11905278 1314..1686 100 <- Minus
2R 11905395..11906046 662..1313 100 <- Minus
2R 11906109..11906266 504..661 100 <- Minus
2R 11906340..11906478 365..503 100 <- Minus
2R 11912413..11912775 1..364 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:33:15 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7791828..7792349 1687..2208 99 <- Minus
arm_2R 7792411..7792783 1314..1686 100 <- Minus
arm_2R 7792900..7793551 662..1313 100 <- Minus
arm_2R 7793614..7793771 504..661 100 <- Minus
arm_2R 7793845..7793983 365..503 100 <- Minus
arm_2R 7799918..7800280 1..364 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:39:47 Download gff for FI01543.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11907539..11907677 365..503 100 <- Minus
2R 11905522..11906043 1687..2208 99 <- Minus
2R 11906105..11906477 1314..1686 100 <- Minus
2R 11906594..11907245 662..1313 100 <- Minus
2R 11907308..11907465 504..661 100 <- Minus
2R 11913612..11913974 1..364 99   Minus

FI01543.pep Sequence

Translation from 395 to 1690

> FI01543.pep
MISRRKIISRSLDNLDAIGQEEQEEDVWHDREKLFRDHINEVLSKWEQID
DEIWAKIIVFEKNRRVAKAYARSSVITINGSKNGFDGVRIGLNGFDNPMR
DAETKVIKKSIGDGFKIKMDDTGNIFIKRYGKSSIYVNSTSQGNEETVIG
GDIIQMPQMSLTAATSARLFDMKKFQTNINREFARTYPERGRLERQCLSA
VSLVKSNNNLINSPVWILVVNVVAMDMLRSRLQTIPKSLDAMGMRVPLTN
SSEDPYSTIESQVGLIYPTPAASDDSQNSQHSSNSSKGRRSIFSAAFLNE
GPYVPKPDYESGGSLTPIYADKKRQKSSGSQQRKKQDDPYYCGLLARIPN
FIKSSKQPCPGGASKPKKEPKISRKISAQHQQQQFLQPAQPIPIATFHHS
YFPYKLYPPQHRLSQSQMSLWDARSLISAHE*

FI01543.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:28:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11799-PA 433 GF11799-PA 1..433 1..431 2080 93.8 Plus
Dana\GF13107-PA 513 GF13107-PA 1..260 1..256 830 58.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:28:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22620-PA 431 GG22620-PA 1..431 1..431 2299 99.5 Plus
Dere\GG20231-PA 516 GG20231-PA 1..401 1..369 912 46.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:28:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20403-PA 436 GH20403-PA 1..436 1..431 1866 83.5 Plus
Dgri\GH21480-PA 522 GH21480-PA 1..262 1..258 835 58 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:14
Subject Length Description Subject Range Query Range Score Percent Strand
reb-PA 431 CG13183-PA 1..431 1..431 2230 100 Plus
exp-PB 513 CG13188-PB 1..472 1..425 913 43.5 Plus
exp-PA 1025 CG13188-PA 1..472 1..425 913 43.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:28:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19590-PA 447 GI19590-PA 1..436 1..430 1900 84 Plus
Dmoj\GI19958-PA 521 GI19958-PA 1..394 1..356 851 45.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:28:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10242-PA 432 GL10242-PA 1..432 1..431 2006 91.9 Plus
Dper\GL10094-PA 518 GL10094-PA 1..384 1..357 911 48.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:28:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12100-PA 432 GA12100-PA 1..432 1..431 2007 91.9 Plus
Dpse\GA25074-PB 1038 GA25074-PB 1..384 1..357 917 48.7 Plus
Dpse\GA25074-PA 518 GA25074-PA 1..384 1..357 911 48.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:28:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20400-PA 431 GM20400-PA 1..431 1..431 2293 99.3 Plus
Dsec\GM21319-PA 515 GM21319-PA 1..401 1..369 915 47 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:29:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25874-PA 431 GD25874-PA 1..431 1..431 2305 99.8 Plus
Dsim\GD10827-PA 515 GD10827-PA 1..401 1..369 911 46.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:29:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18369-PA 431 GJ18369-PA 1..431 1..431 1930 85.5 Plus
Dvir\GJ17909-PA 518 GJ17909-PA 1..388 1..356 899 47 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:29:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22250-PA 442 GK22250-PA 1..442 1..431 1759 81.7 Plus
Dwil\GK22050-PA 518 GK22050-PA 1..262 1..258 840 58.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:29:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13489-PA 431 GE13489-PA 1..431 1..431 2285 98.6 Plus
Dyak\GE12392-PA 514 GE12392-PA 1..401 1..369 916 46.8 Plus

FI01543.hyp Sequence

Translation from 395 to 1690

> FI01543.hyp
MISRRKIISRSLDNLDAIGQEEQEEDVWHDREKLFRDHINEVLSKWEQID
DEIWAKIIVFEKNRRVAKAYARSSVITINGSKNGFDGVRIGLNGFDNPMR
DAETKVIKKSIGDGFKIKMDDTGNIFIKRYGKSSIYVNSTSQGNEETVIG
GDIIQMPQMSLTAATSARLFDMKKFQTNINREFARTYPERGRLERQCLSA
VSLVKSNNNLINSPVWILVVNVVAMDMLRSRLQTIPKSLDAMGMRVPLTN
SSEDPYSTIESQVGLIYPTPAASDDSQNSQHSSNSSKGRRSIFSAAFLNE
GPYVPKPDYESGGSLTPIYADKKRQKSSGSQQRKKQDDPYYCGLLARIPN
FIKSSKQPCPGGASKPKKEPKISRKISAQHQQQQFLQPAQPIPIATFHHS
YFPYKLYPPQHRLSQSQMSLWDARSLISAHE*

FI01543.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:13:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG13183-PA 431 CG13183-PA 1..431 1..431 2230 100 Plus
CG13188-PB 513 CG13188-PB 1..472 1..425 913 43.5 Plus
CG13188-PA 1025 CG13188-PA 1..472 1..425 913 43.5 Plus