BDGP Sequence Production Resources |
Search the DGRC for FI01658
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 16 |
Well: | 58 |
Vector: | pFlc-1 |
Associated Gene/Transcript | RpL23A-RA |
Protein status: | FI01658.pep: gold |
Sequenced Size: | 1054 |
Gene | Date | Evidence |
---|---|---|
RpL23A | 2008-04-29 | Release 5.5 accounting |
RpL23A | 2008-08-15 | Release 5.9 accounting |
RpL23A | 2008-12-18 | 5.12 accounting |
1054 bp assembled on 2007-09-04
GenBank Submission: BT030798
> FI01658.complete GCTTTTGACAACTGCCCCTCAGTTTTCCTTTTCATTTCTTTTTCTCGTAG AAATGCCACCCAAAAAGCCAACCGAGAAATCCGCCAAGCCTGGCGACAAG AAGCCAGAGCAGAAGAAGACTGCTGCGGCTCCCGCTGCCGGCAAGAAGGA GGCTGCTCCCTCGGCTGCCAAGCCAGCTGCCGCTGCGCCCAAGAAGGCTG CTGCCCCAGCGGCTAAGAAGGCTGCTCCGGCCGCCAAGAAGCCAGCGACC GCCGGTGCTGCTGCCAAGAAGCCCGCGGCCGTAAAGACGACCGCGGCCGC CAAGGCCAAGAGCAAGGATGCCAAGAAGAAGGTCCTCGCCGGCAAGAAGC CCCAGTCCGTGCTGGCCAAGCTCTCTGCCAAGGCTCGCGCGGCCGCCAAG GCCAAGAAGGGCGTGAAGCCCGTGACCAAGCCCGCCAAGGGAACCGCCAA GGCCAAGGCTGTGGCTCTGCTGAACGCCAAGAAGGTCCAGAAGAAGATCA TCAAGGGCGCCTTCGGCACCCGTGCCCGCAAGATCCGCACCAACGTGCAC TTCCGTCGGCCAACCACCCTGAAGCTGCCCAGGAGTCCCAAGTACCCCAG GAAATCGGTGCCCACCAGGAACCGCATGGACGCGTACAACATCATCAAGT ACCCACTGACCACCGAGGCGGCCATGAAGAAGATCGAGGACAACAACACC CTGGTCTTCCTCACACACCTGCGCGCCAACAAGAACCACGTGCGTGCCGC AGTGCGCAAGCTCTACGACATCAAGGTGGCCAAGGTGAACGTGCTCATCC GGCCCGATGGCCAGAAGAAGGCCTATGTGCGCCTGGCGCGCGACTACGAC GCCCTGGACATTGCCAACAAGATCGGCATCATATAAGCGCTGCAATCTGC GGTAACGTGTGGAATGGGCATCGCGTTCTACATTTTATATGTAGATTCTT TTCTATAAACAAAGTAATGCTAAGCTGACACGGTAGAGCGAGGATGAACG TTTCAAAGTTGTCTGGGTTTAATAAAACCACTCAAAAACTAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL23A-RA | 1207 | RpL23A-RA | 71..1111 | 2..1042 | 5205 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1666740..1667285 | 1040..495 | 2715 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 1667357..1667770 | 496..83 | 2070 | 100 | Minus |
chr3L | 24539361 | chr3L | 1668144..1668225 | 83..2 | 410 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Uhg7-RA | 421 | CR42453-RA | 1..118 | 925..1042 | 590 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 650..750 | 152..258 | 126 | 59.8 | Plus |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 647..753 | 197..303 | 112 | 56.1 | Plus |
rooA | 7621 | rooA ROOA_LTR 7621bp | 6504..6554 | 920..970 | 111 | 68.6 | Plus |
Dvir\Uvir | 6564 | Dvir\Uvir VIRUVIR 6564bp | 4486..4537 | 78..130 | 109 | 69.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1666740..1667283 | 497..1040 | 99 | <- | Minus |
chr3L | 1667357..1667769 | 84..496 | 100 | <- | Minus |
chr3L | 1668144..1668225 | 1..83 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL23A-RA | 1..834 | 53..886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL23A-RA | 1..834 | 53..886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL23A-RA | 1..834 | 53..886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL23A-RA | 1..834 | 53..886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL23A-RA | 1..834 | 53..886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uhg7-RA | 1..116 | 925..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL23A-RA | 1..1039 | 2..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL23A-RA | 1..1039 | 2..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL23A-RA | 22..1016 | 46..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL23A-RA | 1..1039 | 2..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL23A-RA | 22..1016 | 46..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1667192..1667735 | 497..1040 | 100 | <- | Minus |
3L | 1667809..1668221 | 84..496 | 100 | <- | Minus |
3L | 1668596..1668677 | 1..83 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1667192..1667735 | 497..1040 | 100 | <- | Minus |
3L | 1667809..1668221 | 84..496 | 100 | <- | Minus |
3L | 1668596..1668677 | 1..83 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1667192..1667735 | 497..1040 | 100 | <- | Minus |
3L | 1667809..1668221 | 84..496 | 100 | <- | Minus |
3L | 1668596..1668677 | 1..83 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1667192..1667735 | 497..1040 | 100 | <- | Minus |
arm_3L | 1667809..1668221 | 84..496 | 100 | <- | Minus |
arm_3L | 1668596..1668677 | 1..83 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1667192..1667735 | 497..1040 | 100 | <- | Minus |
3L | 1667809..1668221 | 84..496 | 100 | <- | Minus |
3L | 1668596..1668677 | 1..83 | 98 | Minus |
Translation from 1 to 885
> FI01658.hyp LLTTAPQFSFSFLFLVEMPPKKPTEKSAKPGDKKPEQKKTAAAPAAGKKE AAPSAAKPAAAAPKKAAAPAAKKAAPAAKKPATAGAAAKKPAAVKTTAAA KAKSKDAKKKVLAGKKPQSVLAKLSAKARAAAKAKKGVKPVTKPAKGTAK AKAVALLNAKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPR KSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRANKNHVRAA VRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGII*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL23A-PA | 277 | CG7977-PA | 1..277 | 18..294 | 1372 | 100 | Plus |
RpL22-PA | 299 | CG7434-PA | 3..189 | 19..178 | 180 | 38 | Plus |
RpL22-PA | 299 | CG7434-PA | 64..241 | 22..192 | 157 | 36.2 | Plus |
Translation from 52 to 885
> FI01658.pep MPPKKPTEKSAKPGDKKPEQKKTAAAPAAGKKEAAPSAAKPAAAAPKKAA APAAKKAAPAAKKPATAGAAAKKPAAVKTTAAAKAKSKDAKKKVLAGKKP QSVLAKLSAKARAAAKAKKGVKPVTKPAKGTAKAKAVALLNAKKVQKKII KGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKY PLTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIR PDGQKKAYVRLARDYDALDIANKIGII*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24974-PA | 534 | GF24974-PA | 357..534 | 100..277 | 814 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14575-PA | 76 | GG14575-PA | 1..36 | 1..36 | 146 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15515-PA | 280 | GH15515-PA | 102..280 | 100..277 | 791 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL23A-PA | 277 | CG7977-PA | 1..277 | 1..277 | 1372 | 100 | Plus |
RpL22-PA | 299 | CG7434-PA | 3..189 | 2..161 | 180 | 38 | Plus |
RpL22-PA | 299 | CG7434-PA | 64..241 | 5..175 | 157 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16793-PA | 274 | GI16793-PA | 90..274 | 94..277 | 852 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12432-PA | 266 | GL12432-PA | 1..266 | 1..277 | 835 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20736-PA | 266 | GA20736-PA | 1..266 | 1..277 | 843 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14186-PA | 70 | GM14186-PA | 1..70 | 208..277 | 369 | 100 | Plus |
Dsec\GM14185-PA | 139 | GM14185-PA | 1..133 | 1..133 | 192 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13453-PA | 277 | GD13453-PA | 1..277 | 1..277 | 1299 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12535-PA | 276 | GJ12535-PA | 98..276 | 100..277 | 779 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17068-PA | 273 | GK17068-PA | 1..273 | 1..277 | 827 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\RpL23A-PA | 277 | GE20933-PA | 1..277 | 1..277 | 1287 | 97.1 | Plus |