Clone FI01813 Report

Search the DGRC for FI01813

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:18
Well:13
Vector:pFlc-1
Associated Gene/Transcriptpcl-RA
Protein status:FI01813.pep: gold
Sequenced Size:1318

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
pcl 2008-04-29 Release 5.5 accounting
pcl 2008-08-15 Release 5.9 accounting
pcl 2008-12-18 5.12 accounting

Clone Sequence Records

FI01813.complete Sequence

1318 bp assembled on 2007-09-19

GenBank Submission: BT030803

> FI01813.complete
AGTCAGTCGTGTTCGTCGGTTGTTATAGGGAACATGCCAAGATTTCAAAT
AAAGAGTTTGGTCTTTCTGGCCGGACTTATAGTTTTGGTTGGGGAGGCTA
ATTCCACCCTACGCCGAATACCCATTCAAAAGTCGCCAAACTTTAAGCGC
AGCCACAAAAATATTGTGGCAGAAAGGGATTTTGTTCAGCAGAAATACAA
TCGCCAATACACCGCTAATGGGTATCCCATGGAGCACCTGTCCAACTACG
ATAACTTTCAGTATTATGGAAATATAAGCATTGGAACCCCCGGCCAGGAC
TTTTTGGTACAATTCGACACCGGTTCCTCAAACCTTTGGGTTCCGGGAAG
CTCGTGTATCAGCACAGCGTGTCAGGATCACCAGGTCTTCTACAAAAATA
AATCCAGTACCTATGTGGCCAATGGAACGGCCTTTTCCATAACCTATGGA
ACTGGCAGTGTTTCTGGTTATCTATCCGTGGATTGTGTAGGCTTTGCTGG
CTTGACGATACAAAGTCAGACATTCGGTGAGGTAACTACCGAGCAGGGAA
CAAATTTCGTAGATGCATACTTCGACGGAATACTGGGCATGGGATTCCCC
TCTTTGGCCGTGGACGGAGTTACCCCGACGTTTCAGAACATGATGCAGCA
GGGACTCGTTCAAAGCCCAGTGTTTTCATTTTTTCTGAGGGATAACGGCA
GTGTAACTTTTTACGGAGGTGAACTTATTTTGGGCGGCTCGGATCCCTCG
CTTTACAGCGGTTCCCTCACCTATGTGAATGTCGTTCAGGCCGCATATTG
GAAATTCCAAACGGATTATATCAAAGTCGGTAGTACTTCCATTAGCACCT
TTGCCCAAGCAATTGCGGATACTGGAACATCTCTGATTATAGCTCCCCAG
GCGCAATATGATCAGATTTCTCAATTGTTTAATGCTAATTCGGAGGGACT
TTTCGAATGCAGTTCCACTTCCTACCCGGATCTAATAATCAACATTAATG
GCGTGGACTTTAAAATCCCAGCCAAATATTATATCATCGAGGAAGAAGAT
TTCTGTTCGCTGGCCATTCAATCTATAAACCAAGACTTTTGGATTATGGG
AGATGTATTTTTGGGTCGTATTTATACCGAATTCGATGTGGGCAATCAAA
GGCTGGGATTCGCACCGGTAAACTCAGCAGTTGGCTTAAGGAAAGCGGTT
CTGTGGCGGATCTTCACTTTATTGCTGGCTTGTGGAATGTGGAAGCTGAA
AAATTAGTTACATTTTCCAAATTAAAATAAAAATCAAGACTATTTTATAA
ATCTAAAAAAAAAAAAAA

FI01813.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:51:30
Subject Length Description Subject Range Query Range Score Percent Strand
pcl-RA 1304 pcl-RA 1..1304 1..1304 6520 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:18:48
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 330183..331486 1304..1 6505 99.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:06:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:18:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 436137..437442 1306..1 6530 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:48:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 444235..445540 1306..1 6530 100 Minus
Blast to na_te.dros performed on 2019-03-16 11:18:47 has no hits.

FI01813.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:19:27 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 330183..331486 1..1304 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:38:31 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
pcl-RA 1..1224 34..1257 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:37:18 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
pcl-RA 1..1224 34..1257 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:39:10 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
pcl-RA 1..1224 34..1257 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:42:36 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
pcl-RA 1..1224 34..1257 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:11:54 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
pcl-RA 1..1224 34..1257 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:06:12 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
pcl-RA 1..1304 1..1304 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:37:18 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
pcl-RA 1..1304 1..1304 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:39:10 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
pcl-RA 7..1310 1..1304 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:42:37 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
pcl-RA 1..1257 1..1257 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:11:54 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
pcl-RA 7..1310 1..1304 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:19:27 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
X 436139..437442 1..1304 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:19:27 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
X 436139..437442 1..1304 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:19:27 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
X 436139..437442 1..1304 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:39:10 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 330172..331475 1..1304 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:20:19 Download gff for FI01813.complete
Subject Subject Range Query Range Percent Splice Strand
X 444237..445540 1..1304 100   Minus

FI01813.hyp Sequence

Translation from 1 to 1256

> FI01813.hyp
SQSCSSVVIGNMPRFQIKSLVFLAGLIVLVGEANSTLRRIPIQKSPNFKR
SHKNIVAERDFVQQKYNRQYTANGYPMEHLSNYDNFQYYGNISIGTPGQD
FLVQFDTGSSNLWVPGSSCISTACQDHQVFYKNKSSTYVANGTAFSITYG
TGSVSGYLSVDCVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFP
SLAVDGVTPTFQNMMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPS
LYSGSLTYVNVVQAAYWKFQTDYIKVGSTSISTFAQAIADTGTSLIIAPQ
AQYDQISQLFNANSEGLFECSSTSYPDLIININGVDFKIPAKYYIIEEED
FCSLAIQSINQDFWIMGDVFLGRIYTEFDVGNQRLGFAPVNSAVGLRKAV
LWRIFTLLLACGMWKLKN*

FI01813.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:14:43
Subject Length Description Subject Range Query Range Score Percent Strand
pcl-PA 407 CG13374-PA 1..407 12..418 2127 100 Plus
Bace-PB 372 CG13095-PB 5..371 23..390 959 51.8 Plus
Bace-PA 372 CG13095-PA 5..371 23..390 959 51.8 Plus
CG17134-PA 391 CG17134-PA 7..388 26..390 827 47.5 Plus
CG33128-PA 405 CG33128-PA 63..402 61..388 761 47.5 Plus

FI01813.pep Sequence

Translation from 33 to 1256

> FI01813.pep
MPRFQIKSLVFLAGLIVLVGEANSTLRRIPIQKSPNFKRSHKNIVAERDF
VQQKYNRQYTANGYPMEHLSNYDNFQYYGNISIGTPGQDFLVQFDTGSSN
LWVPGSSCISTACQDHQVFYKNKSSTYVANGTAFSITYGTGSVSGYLSVD
CVGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAVDGVTPTF
QNMMQQGLVQSPVFSFFLRDNGSVTFYGGELILGGSDPSLYSGSLTYVNV
VQAAYWKFQTDYIKVGSTSISTFAQAIADTGTSLIIAPQAQYDQISQLFN
ANSEGLFECSSTSYPDLIININGVDFKIPAKYYIIEEEDFCSLAIQSINQ
DFWIMGDVFLGRIYTEFDVGNQRLGFAPVNSAVGLRKAVLWRIFTLLLAC
GMWKLKN*

FI01813.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:07:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19752-PA 405 GF19752-PA 5..402 7..405 1230 62.3 Plus
Dana\GF20814-PA 405 GF20814-PA 22..402 23..405 1200 59.6 Plus
Dana\GF20813-PA 403 GF20813-PA 21..401 24..403 1159 58 Plus
Dana\GF14369-PA 371 GF14369-PA 2..370 6..379 950 52 Plus
Dana\GF19728-PA 390 GF19728-PA 1..388 6..379 795 44 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:07:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12763-PA 407 GG12763-PA 1..407 1..407 1907 87.5 Plus
Dere\GG24067-PA 372 GG24067-PA 19..371 26..379 942 53.2 Plus
Dere\GG23678-PA 392 GG23678-PA 13..389 19..379 828 46.6 Plus
Dere\GG24793-PA 404 GG24793-PA 7..403 15..379 743 42.2 Plus
Dere\GG22202-PA 395 GG22202-PA 14..394 15..379 739 42.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:07:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24623-PA 374 GH24623-PA 2..373 6..379 929 49.6 Plus
Dgri\GH24344-PA 373 GH24344-PA 15..372 23..379 885 48.6 Plus
Dgri\GH24624-PA 446 GH24624-PA 32..387 26..379 831 46.9 Plus
Dgri\GH11416-PA 400 GH11416-PA 19..398 26..378 722 43.2 Plus
Dgri\GH21578-PA 388 GH21578-PA 17..385 22..377 717 43.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:29:50
Subject Length Description Subject Range Query Range Score Percent Strand
Pgcl-PA 407 CG13374-PA 1..407 1..407 2127 100 Plus
Bace-PB 372 CG13095-PB 5..371 12..379 959 51.8 Plus
Bace-PA 372 CG13095-PA 5..371 12..379 959 51.8 Plus
CG17134-PA 391 CG17134-PA 7..388 15..379 827 47.5 Plus
CG33128-PA 405 CG33128-PA 63..402 50..377 761 47.5 Plus
CG5863-PA 395 CG5863-PA 14..393 15..378 738 43.8 Plus
CG6508-PA 423 CG6508-PA 2..385 5..377 714 40.4 Plus
cathD-PC 392 CG1548-PC 5..389 8..377 710 43.1 Plus
cathD-PB 392 CG1548-PB 5..389 8..377 710 43.1 Plus
cathD-PA 392 CG1548-PA 5..389 8..377 710 43.1 Plus
CG17283-PA 465 CG17283-PA 96..459 22..377 645 39.9 Plus
CG10104-PA 404 CG10104-PA 28..404 26..381 606 37.5 Plus
CG31926-PB 410 CG31926-PB 12..407 9..378 605 37.1 Plus
CG31926-PA 410 CG31926-PA 12..407 9..378 605 37.1 Plus
CG31661-PA 393 CG31661-PA 3..391 6..378 551 36.4 Plus
CG5860-PA 370 CG5860-PA 2..367 6..377 546 34.6 Plus
CG31928-PB 418 CG31928-PB 82..416 67..378 508 34.3 Plus
CG31928-PA 418 CG31928-PA 82..416 67..378 508 34.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:07:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11124-PA 373 GI11124-PA 2..372 6..379 907 48.8 Plus
Dmoj\GI11125-PA 371 GI11125-PA 2..370 6..379 895 48.7 Plus
Dmoj\GI11126-PA 421 GI11126-PA 20..416 26..405 841 44.4 Plus
Dmoj\GI14567-PA 402 GI14567-PA 2..401 4..379 781 44.7 Plus
Dmoj\GI19550-PA 387 GI19550-PA 22..384 26..377 657 44.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:07:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25647-PA 373 GL25647-PA 1..372 4..379 925 49.9 Plus
Dper\GL26924-PA 391 GL26924-PA 27..388 24..407 883 46.6 Plus
Dper\GL26637-PA 387 GL26637-PA 3..386 7..381 860 46.5 Plus
Dper\GL15694-PA 401 GL15694-PA 7..401 15..381 802 45.6 Plus
Dper\GL11239-PA 388 GL11239-PA 18..385 21..377 721 44.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:07:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26724-PA 416 GA26724-PA 8..413 10..407 1029 51.2 Plus
Dpse\GA22674-PA 423 GA22674-PA 27..420 24..407 1004 51.5 Plus
Dpse\GA22213-PA 373 GA22213-PA 1..372 4..379 927 49.9 Plus
Dpse\GA25369-PA 373 GA25369-PA 1..372 4..379 925 49.9 Plus
Dpse\GA14340-PA 387 GA14340-PA 3..386 7..381 865 46.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:07:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19043-PA 407 GM19043-PA 1..406 1..406 2027 94.1 Plus
Dsec\GM12869-PA 372 GM12869-PA 16..371 23..379 948 52.8 Plus
Dsec\GM18746-PA 392 GM18746-PA 13..389 19..379 819 46.6 Plus
Dsec\GM15229-PA 395 GM15229-PA 14..394 15..379 755 43.7 Plus
Dsec\GM16820-PA 405 GM16820-PA 2..402 6..377 722 43.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:07:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19155-PA 395 GD19155-PA 14..394 15..379 749 43.5 Plus
Dsim\GD23099-PA 405 GD23099-PA 2..402 6..377 729 43.6 Plus
Dsim\GD23736-PA 564 GD23736-PA 261..561 90..379 707 50 Plus
Dsim\GD23735-PA 404 GD23735-PA 4..368 26..379 696 40.6 Plus
Dsim\GD10217-PA 324 GD10217-PA 4..321 76..377 664 46.6 Plus
Dsim\GD23736-PA 564 GD23736-PA 13..258 19..258 618 51 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:07:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15983-PA 372 GJ15983-PA 2..371 6..379 909 49.6 Plus
Dvir\GJ15982-PA 374 GJ15982-PA 2..373 6..379 891 48.5 Plus
Dvir\GJ15984-PA 423 GJ15984-PA 4..422 10..397 852 43.7 Plus
Dvir\GJ17077-PA 404 GJ17077-PA 16..403 23..379 741 43.1 Plus
Dvir\GJ21122-PA 391 GJ21122-PA 3..388 7..377 663 43.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:07:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24836-PA 372 GK24836-PA 2..371 6..379 962 51.7 Plus
Dwil\GK25659-PA 406 GK25659-PA 27..391 26..379 834 48.8 Plus
Dwil\GK19045-PA 411 GK19045-PA 3..410 7..379 752 43.7 Plus
Dwil\GK21682-PA 389 GK21682-PA 3..386 7..377 745 44.4 Plus
Dwil\GK15195-PA 431 GK15195-PA 31..427 26..378 711 39.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:07:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16588-PA 408 GE16588-PA 1..408 1..407 1823 86.3 Plus
Dyak\GE10927-PA 372 GE10927-PA 16..371 23..379 963 53.9 Plus
Dyak\GE18491-PA 392 GE18491-PA 13..389 19..379 809 46.8 Plus
Dyak\GE10129-PA 396 GE10129-PA 25..395 26..379 751 44.9 Plus
Dyak\GE17593-PA 404 GE17593-PA 2..401 6..377 722 42.7 Plus