Clone FI01818 Report

Search the DGRC for FI01818

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:18
Well:18
Vector:pFlc-1
Associated Gene/Transcriptinsv-RA
Protein status:FI01818.pep: gold
Sequenced Size:1679

Clone Sequence Records

FI01818.complete Sequence

1679 bp assembled on 2009-01-06

GenBank Submission: BT056232.1

> FI01818.complete
GGTTTTATTTCATAGCCCTAGGTGTCAACCCTGTCGATGAAAGAGAGAGC
AAAAGCAGCTTTATTCGCAATTATTTATAATAATAATTATAATACATATA
CTGGTTCCCGCGCAAACAACAAATCCCATGCGAAGAAAGGAAAAGACAGC
TGGACTTGGACTAGTTGGGAAATAGACGGGGTCCTGAAACAGAAACAGGA
ATAGGATATCAGCTACCTGGAGGGCACACTCACACACACGCAGAGGCAGG
CGCTCTCTTCCCCGTATATGCGTGCGCATGTGTGCGTGCAGGTAGGAATG
CAACCACTTTTCGCATTCTGCCGCCAATTTTCAGTTGACGCAGATCCTTT
GAGGATTGAACATGGAAAACCAATATCAGCGCATAGTCAGCGCCACTGCA
CGCGAGGATTCGCAGGCAAGGAGGAGCAAGCCCTTGTTTCTGAATGCCTG
GTCGCAGACTTCTAGCGTGGACTTCGAGGTGCTTCGCAGCATCTCCGCGC
CGGACCCGCAAGTGGAGGTCGAGAACAGAGCGCTCCGCGATAAGGTCCGC
TACTTGGAGGCCAAACTGCAGCAGCACAAGGATCTGCTATCCCAGATTCA
TGCCACCTCCGCCAGGATGCAACAGGCATCCTCCCTGCTGGCAGAAAGTA
GACCACCCACGCCGCCCGCGGTCCAGAGCCACCACATTCTCACGCCACCG
AGTTCAGAGATATGTGCGCCCGCGCAGAATCCCCAGATTCTGGACTACAA
GATCATCTCGGCACCCGACGATGCGGATGCCATTGAGATTCGCCTGGCGG
CGGAGAGTCTGAACAGCCTGAGCACCTCTGCGGACTCAGATCGCCTGGAG
ATTTGCCTGGGCGACGAGAATCATCAGCAGAGCAATCATCACAATTCCCA
GCAGCAGTACAGGATTAGCAACGGCATAAAGAGGGATGGTTCCTCCGAGT
CCGCCGACACTCCACTACAGTTCATCAAACGCCGCAAGCTGCAGGAGATT
CAGTTGCAGGAAGAAATCCCGCGGCAGAACATAAAACTACCAGCCAAACC
CCAAGTCAAAGCCCGTAATGGCAGTTTTACCGATCTCAACAAGGGCCAAC
AGCAAAACATGGACAACGTGATGGTGTCCATTGGCCCGAACAACACCTGT
GTGCCCGCCAGTGTCTTCGAGAATATTAACTGGTCGGTGTGCTCGCTGGC
CACCCGGAAACTACTGGTCACGATCTTCGACCGGGAAACTCTGGCCACCC
ATTCGATGACGGGCAAGCCGTCGCCCGCCTTCAAGGATCAGGACAAGCCG
CTCAAGCGAATGCTCGATCCTGGGAAGATCCAGGACATCATATTCGCAGT
GACGCACAAGTGTAATGCCAGTGAGAAGGAGGTGCGCAACGCCATCACCA
CCAAGTGCGCCGACGAGAACAAGATGATGAAGATCCAGAACGTCAAGCGA
CGCAGCAGTGGCATCAAACACGAAAAGGAGAACATTATTTAGATGTATTA
GTAGAAATTTGTTAGCACTTAATCATTAATGACTTAGAATAGCACCAAAA
ACGGCTGTAATGCCCGCACAAACTCTCACAATCCATAGATAGTAGAGCAC
TACATCGAACTAACGTGTAGCAGATTTTTAAAGATCTCGAAGATGATTTT
ACCAATCCGAACCAAAAAAAAAAAAAAAA

FI01818.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:44:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG3227-RA 1768 CG3227-RA 2..1667 2..1667 8330 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:55:31
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2575073..2576365 1663..371 6465 100 Minus
chr2L 23010047 chr2L 2576430..2576798 370..2 1800 99.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:06:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:55:29
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2575276..2576572 1667..371 6485 100 Minus
2L 23513712 2L 2576637..2577005 370..2 1845 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:41:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2575276..2576572 1667..371 6485 100 Minus
2L 23513712 2L 2576637..2577005 370..2 1845 100 Minus
Blast to na_te.dros performed 2019-03-16 07:55:30
Subject Length Description Subject Range Query Range Score Percent Strand
TAHRE 10463 TAHRE OSV 10463bp 6772..6827 102..48 115 69.6 Minus

FI01818.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:56:27 Download gff for FI01818.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2575073..2576365 371..1663 100 <- Minus
chr2L 2576430..2576798 1..370 91   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:50:18 Download gff for FI01818.complete
Subject Subject Range Query Range Percent Splice Strand
insv-RA 1..1131 362..1492 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:22:45 Download gff for FI01818.complete
Subject Subject Range Query Range Percent Splice Strand
CG3227-RA 1..1131 362..1492 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:52:35 Download gff for FI01818.complete
Subject Subject Range Query Range Percent Splice Strand
insv-RA 1..1131 362..1492 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:45:07 Download gff for FI01818.complete
Subject Subject Range Query Range Percent Splice Strand
insv-RA 1..1131 362..1492 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-01-06 14:56:25 Download gff for FI01818.complete
Subject Subject Range Query Range Percent Splice Strand
insv-RA 2..1663 2..1663 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:22:44 Download gff for FI01818.complete
Subject Subject Range Query Range Percent Splice Strand
CG3227-RA 2..1663 2..1663 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:52:35 Download gff for FI01818.complete
Subject Subject Range Query Range Percent Splice Strand
insv-RA 1..1654 10..1663 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:45:07 Download gff for FI01818.complete
Subject Subject Range Query Range Percent Splice Strand
insv-RA 1..1654 10..1663 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:56:27 Download gff for FI01818.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2575280..2576572 371..1663 100 <- Minus
2L 2576637..2577005 1..370 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:56:27 Download gff for FI01818.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2575280..2576572 371..1663 100 <- Minus
2L 2576637..2577005 1..370 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:56:27 Download gff for FI01818.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2575280..2576572 371..1663 100 <- Minus
2L 2576637..2577005 1..370 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:52:35 Download gff for FI01818.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2575280..2576572 371..1663 100 <- Minus
arm_2L 2576637..2577005 1..370 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:10:29 Download gff for FI01818.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2575280..2576572 371..1663 100 <- Minus
2L 2576637..2577005 1..370 99   Minus

FI01818.hyp Sequence

Translation from 361 to 1491

> FI01818.hyp
MENQYQRIVSATAREDSQARRSKPLFLNAWSQTSSVDFEVLRSISAPDPQ
VEVENRALRDKVRYLEAKLQQHKDLLSQIHATSARMQQASSLLAESRPPT
PPAVQSHHILTPPSSEICAPAQNPQILDYKIISAPDDADAIEIRLAAESL
NSLSTSADSDRLEICLGDENHQQSNHHNSQQQYRISNGIKRDGSSESADT
PLQFIKRRKLQEIQLQEEIPRQNIKLPAKPQVKARNGSFTDLNKGQQQNM
DNVMVSIGPNNTCVPASVFENINWSVCSLATRKLLVTIFDRETLATHSMT
GKPSPAFKDQDKPLKRMLDPGKIQDIIFAVTHKCNASEKEVRNAITTKCA
DENKMMKIQNVKRRSSGIKHEKENII*

FI01818.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:15:02
Subject Length Description Subject Range Query Range Score Percent Strand
insv-PB 376 CG3227-PB 1..376 1..376 1918 100 Plus
insv-PA 376 CG3227-PA 1..376 1..376 1918 100 Plus
Bsg25A-PA 363 CG12205-PA 158..362 168..365 290 38.3 Plus
Elba2-PA 381 CG9883-PA 184..380 172..371 251 30.5 Plus

FI01818.pep Sequence

Translation from 361 to 1491

> FI01818.pep
MENQYQRIVSATAREDSQARRSKPLFLNAWSQTSSVDFEVLRSISAPDPQ
VEVENRALRDKVRYLEAKLQQHKDLLSQIHATSARMQQASSLLAESRPPT
PPAVQSHHILTPPSSEICAPAQNPQILDYKIISAPDDADAIEIRLAAESL
NSLSTSADSDRLEICLGDENHQQSNHHNSQQQYRISNGIKRDGSSESADT
PLQFIKRRKLQEIQLQEEIPRQNIKLPAKPQVKARNGSFTDLNKGQQQNM
DNVMVSIGPNNTCVPASVFENINWSVCSLATRKLLVTIFDRETLATHSMT
GKPSPAFKDQDKPLKRMLDPGKIQDIIFAVTHKCNASEKEVRNAITTKCA
DENKMMKIQNVKRRSSGIKHEKENII*

FI01818.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:10:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20597-PA 362 GF20597-PA 1..362 1..376 1321 73 Plus
Dana\GF23938-PA 378 GF23938-PA 257..367 248..357 308 50.5 Plus
Dana\GF20590-PA 380 GF20590-PA 267..361 257..351 246 44.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:10:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24506-PA 375 GG24506-PA 1..375 1..376 1739 92 Plus
Dere\GG24360-PA 370 GG24360-PA 228..362 221..357 296 46.1 Plus
Dere\GG24864-PA 380 GG24864-PA 255..379 246..371 232 39.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:10:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10578-PA 381 GH10578-PA 29..376 25..375 971 59.2 Plus
Dgri\GH13742-PA 377 GH13742-PA 262..366 254..357 300 51.4 Plus
Dgri\GH11155-PA 307 GH11155-PA 181..283 248..351 242 41.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:11
Subject Length Description Subject Range Query Range Score Percent Strand
insv-PB 376 CG3227-PB 1..376 1..376 1918 100 Plus
insv-PA 376 CG3227-PA 1..376 1..376 1918 100 Plus
Bsg25A-PA 363 CG12205-PA 158..362 168..365 290 38.3 Plus
Elba2-PA 381 CG9883-PA 184..380 172..371 251 30.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:10:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23044-PA 390 GI23044-PA 17..389 14..375 1053 61.7 Plus
Dmoj\GI17884-PA 387 GI17884-PA 272..382 254..363 317 53.2 Plus
Dmoj\GI17861-PA 394 GI17861-PA 280..374 257..351 244 43.2 Plus
Dmoj\GI17866-PA 170 GI17866-PA 47..170 230..361 196 36.4 Plus
Dmoj\GI23010-PA 174 GI23010-PA 65..149 252..330 161 38.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:10:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26458-PA 398 GL26458-PA 28..398 5..376 1119 64.7 Plus
Dper\GL15989-PA 409 GL15989-PA 294..396 254..355 287 52.4 Plus
Dper\GL26565-PA 379 GL26565-PA 138..359 120..351 233 30.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:10:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16802-PA 376 GA16802-PA 4..376 3..376 1121 64.6 Plus
Dpse\GA11475-PA 363 GA11475-PA 248..350 254..355 289 52.4 Plus
Dpse\GA22097-PA 379 GA22097-PA 253..359 231..351 230 37.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:10:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18215-PA 376 GM18215-PA 1..376 1..376 1899 94.4 Plus
Dsec\GM18079-PA 363 GM18079-PA 221..355 221..357 296 46.1 Plus
Dsec\GM18346-PA 381 GM18346-PA 253..380 243..371 234 38.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:10:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22821-PA 376 GD22821-PA 1..376 1..376 1882 93.6 Plus
Dsim\GD22697-PA 363 GD22697-PA 221..355 221..357 296 46.1 Plus
Dsim\GD23161-PA 381 GD23161-PA 253..380 243..371 232 38.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:10:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23568-PA 389 GJ23568-PA 17..388 14..375 1009 61.8 Plus
Dvir\GJ17385-PA 385 GJ17385-PA 268..380 252..363 308 50.4 Plus
Dvir\GJ17359-PA 374 GJ17359-PA 258..352 257..351 241 42.1 Plus
Dvir\GJ17366-PA 170 GJ17366-PA 64..169 255..361 204 38.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:10:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24494-PA 379 GK24494-PA 7..376 4..375 1036 58.3 Plus
Dwil\GK23918-PA 387 GK23918-PA 272..376 254..357 303 53.3 Plus
Dwil\GK24562-PA 370 GK24562-PA 256..361 257..362 245 43.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:10:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15077-PA 375 GE15077-PA 1..375 1..376 1805 91.2 Plus
Dyak\GE14697-PA 369 GE14697-PA 227..361 221..357 294 45.4 Plus
Dyak\GE18162-PA 381 GE18162-PA 253..380 243..371 232 38.8 Plus