Clone FI01908 Report

Search the DGRC for FI01908

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:19
Well:8
Vector:pFlc-1
Associated Gene/TranscriptCstF-64-RA
Protein status:FI01908.pep: gold
Sequenced Size:1440

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CstF-64 2008-12-18 5.12 accounting

Clone Sequence Records

FI01908.complete Sequence

1440 bp assembled on 2008-09-17

GenBank Submission: BT044537.1

> FI01908.complete
GATGTTTGTCAACGTTTGCTAAGATTTTGTCGAGTTTGTGCAGTAAATAA
TAACAAACAACAGATATGGCAGATAAGGCGCAGGAACAAAGTATAATGGA
CAAGTCCATGCGGTCGGTTTTTGTGGGGAACATACCCTACGAGGCCACCG
AGGAGAAGCTAAAGGAGATTTTCAGCGAAGTGGGCCCGGTCTTGTCACTG
AAACTGGTCTTTGATCGGGAAAGTGGCAAACCCAAGGGCTTTGGCTTCTG
CGAGTACAAGGACCAGGAGACGGCTTTAAGTGCCATGCGGAATCTGAATG
GCTATGAGATCGGCGGCAGAACACTGCGAGTGGACAACGCGTGTACGGAG
AAGTCGCGCATGGAGATGCAGCAGCTGCTTCAGGGACCCCAGGTGGAGAA
TCCCTATGGCGAGCCCTGCGAACCAGAGGATGCTCCCGAGCTCATCACCA
AAACGGTGGCTTCCTTGCCGCCGGAGCAAATGTACGAGCTGATGAAGCAG
ATGAAGCTCTGCATCGTGAGCAATCCATCGGAGGCACGCCAGATGCTAAT
GCTCAATCCTCAGTTGGCGTACGCTTTGCTCCAGGCCATGGTGGTTATGA
GGATCGTGGACCCTCAGCAGGCGCTCGGGATGCTCTTCAAGGCCAACCAA
ATGCCCCCCGTCTTGGGCGGCAATCCGCACCAGGGGCCGGGGAATCATAC
CATGATGGGTCAGCAACAGGTTCCGCAACAGCAGGTGCAGATCCCGCAGC
AACAGCAACAGGCTCCCCAGCCACCAATGCCCGTTCCCGGACCTGGCTTC
CCGGCCAATGTCCATCCGAACGATATCGATTTGCGCATGGTGCCGGGTGG
ACCCATGCCGATGGATCCCAGGATGATGGGCCGTGGCATGGACCAGGATT
TGCGAGCTTCTCTACCCAATCCAGTGCCACCGCCGCTGATGGATCCCCGA
GCTCGTGCCCAGATGCCCCCACAGCAGCAGCAGGGCGTTCCGCAGGCGCC
ACCGGCCCCCTATCCCAGCGATCCGCGCCAGCGTCCCATGGATCCCAGGT
TAAGGGCAGGACCTGGTCCTCAGCAGCAGGCGCCGCCACAAGGAATCCCC
CAAGCGCCGCCACCGACACAACAACAGCAGGCGGCCGCTCAGCAGTTGCA
GAGCAGACTAGGCGCCCATGGAGTCCTGCCCTCGGATGCCTCCGACCAGG
AGAAGGCTGCCCTCATCATGCAGGTACTGCAGCTGTCCGACGAACAGATT
GCGCAGCTGCCCTCCGAGCAACGGGTCAGTATTGTCATGCTCAAAGAGCA
GATTGCGAAGAGTACCCAGCGCTGAAACTACTCTGGCTGAAACAAATGAA
AAATCACCATTTCGCTCATGCATACTATAGTACTTTCAACATTGAATCAA
TTAATAAAAAGAACATTTCAACACAAAAAAAAAAAAAAAA

FI01908.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:37:35
Subject Length Description Subject Range Query Range Score Percent Strand
CstF-64-RA 1674 CstF-64-RA 252..1674 4..1426 7100 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:40:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 14484028..14485249 203..1424 6050 99.7 Plus
chr3R 27901430 chr3R 14483766..14483964 4..202 995 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:07:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18659905..18661128 203..1426 6105 99.9 Plus
3R 32079331 3R 18659643..18659841 4..202 995 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:34:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 18400736..18401959 203..1426 6105 99.9 Plus
3R 31820162 3R 18400474..18400672 4..202 995 100 Plus
Blast to na_te.dros performed 2019-03-15 18:40:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6782..6848 711..780 145 70 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2207..2352 635..771 134 58.5 Plus
roo 9092 roo DM_ROO 9092bp 1061..1130 711..780 134 65.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2328..2388 711..774 133 70.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2340..2390 711..761 129 72.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6728..6788 711..774 124 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6749..6809 711..774 124 68.8 Plus
roo 9092 roo DM_ROO 9092bp 1097..1157 711..774 115 67.2 Plus

FI01908.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:42:00 Download gff for FI01908.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 14483763..14483964 1..202 99 -> Plus
chr3R 14484028..14485249 203..1424 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:38:53 Download gff for FI01908.complete
Subject Subject Range Query Range Percent Splice Strand
CstF-64-RA 1..1260 66..1325 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:08:15 Download gff for FI01908.complete
Subject Subject Range Query Range Percent Splice Strand
CstF-64-RA 1..1260 66..1325 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:27:13 Download gff for FI01908.complete
Subject Subject Range Query Range Percent Splice Strand
CstF-64-RA 1..1260 66..1325 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:56:54 Download gff for FI01908.complete
Subject Subject Range Query Range Percent Splice Strand
CstF-64-RA 1..1260 66..1325 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:05:41 Download gff for FI01908.complete
Subject Subject Range Query Range Percent Splice Strand
CstF-64-RA 249..1672 1..1424 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:08:15 Download gff for FI01908.complete
Subject Subject Range Query Range Percent Splice Strand
CstF-64-RA 249..1672 1..1424 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:27:13 Download gff for FI01908.complete
Subject Subject Range Query Range Percent Splice Strand
CstF-64-RA 249..1672 1..1424 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-19 10:47:44 Download gff for FI01908.complete
Subject Subject Range Query Range Percent Splice Strand
CstF-64-RA 249..1672 1..1424 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:56:54 Download gff for FI01908.complete
Subject Subject Range Query Range Percent Splice Strand
CstF-64-RA 23..1446 1..1424 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:42:00 Download gff for FI01908.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18659640..18659841 1..202 99 -> Plus
3R 18659905..18661126 203..1424 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:42:00 Download gff for FI01908.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18659640..18659841 1..202 99 -> Plus
3R 18659905..18661126 203..1424 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:42:00 Download gff for FI01908.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18659640..18659841 1..202 99 -> Plus
3R 18659905..18661126 203..1424 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:27:13 Download gff for FI01908.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14485362..14485563 1..202 99 -> Plus
arm_3R 14485627..14486848 203..1424 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:00:31 Download gff for FI01908.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18400736..18401957 203..1424 99   Plus
3R 18400471..18400672 1..202 99 -> Plus

FI01908.pep Sequence

Translation from 65 to 1324

> FI01908.pep
MADKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFD
RESGKPKGFGFCEYKDQETALSAMRNLNGYEIGGRTLRVDNACTEKSRME
MQQLLQGPQVENPYGEPCEPEDAPELITKTVASLPPEQMYELMKQMKLCI
VSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQQALGMLFKANQMPPVL
GGNPHQGPGNHTMMGQQQVPQQQVQIPQQQQQAPQPPMPVPGPGFPANVH
PNDIDLRMVPGGPMPMDPRMMGRGMDQDLRASLPNPVPPPLMDPRARAQM
PPQQQQGVPQAPPAPYPSDPRQRPMDPRLRAGPGPQQQAPPQGIPQAPPP
TQQQQAAAQQLQSRLGAHGVLPSDASDQEKAALIMQVLQLSDEQIAQLPS
EQRVSIVMLKEQIAKSTQR*

FI01908.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:37:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16912-PA 415 GF16912-PA 1..415 1..419 1570 86.9 Plus
Dana\GF14433-PA 155 GF14433-PA 36..114 18..96 185 45.6 Plus
Dana\GF14957-PA 594 GF14957-PA 337..422 18..104 174 35.6 Plus
Dana\GF14460-PA 453 GF14460-PA 87..176 1..90 159 31.1 Plus
Dana\GF16759-PA 154 GF16759-PA 22..104 6..90 152 37.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:37:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22991-PA 416 GG22991-PA 1..416 1..419 2074 97.1 Plus
Dere\GG21207-PA 154 GG21207-PA 29..110 11..92 182 42.7 Plus
Dere\GG10454-PA 593 GG10454-PA 336..421 18..104 176 35.6 Plus
Dere\GG23559-PA 448 GG23559-PA 87..176 1..90 159 31.1 Plus
Dere\GG23412-PA 165 GG23412-PA 75..147 18..90 144 39.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:37:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18352-PA 430 GH18352-PA 1..426 1..416 1439 80.6 Plus
Dgri\GH13830-PA 180 GH13830-PA 23..110 5..92 178 40.9 Plus
Dgri\GH13506-PA 628 GH13506-PA 371..456 18..104 170 35.6 Plus
Dgri\GH20760-PA 304 GH20760-PA 1..80 11..90 154 40 Plus
Dgri\GH15101-PA 154 GH15101-PA 22..128 6..114 151 33.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:22
Subject Length Description Subject Range Query Range Score Percent Strand
CstF64-PA 419 CG7697-PA 1..419 1..419 2192 100 Plus
CG10466-PB 154 CG10466-PB 29..137 11..121 178 37.8 Plus
CG10466-PA 154 CG10466-PA 29..137 11..121 178 37.8 Plus
Caper-PB 594 CG11266-PB 337..422 18..104 164 35.6 Plus
Caper-PA 594 CG11266-PA 337..422 18..104 164 35.6 Plus
ena-PE 684 CG15112-PE 197..477 95..350 155 24.7 Plus
ena-PC 684 CG15112-PC 197..477 95..350 155 24.7 Plus
ena-PA 684 CG15112-PA 197..477 95..350 155 24.7 Plus
ena-PB 834 CG15112-PB 346..626 95..350 155 24.7 Plus
snRNP-U1-70K-PC 448 CG8749-PC 89..176 3..90 154 31.8 Plus
snRNP-U1-70K-PA 448 CG8749-PA 89..176 3..90 154 31.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:37:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23336-PA 428 GI23336-PA 1..424 1..416 1469 81.2 Plus
Dmoj\GI20215-PA 183 GI20215-PA 36..114 18..96 178 41.8 Plus
Dmoj\GI11259-PA 183 GI11259-PA 36..114 18..96 178 41.8 Plus
Dmoj\GI11260-PA 177 GI11260-PA 30..108 18..96 178 41.8 Plus
Dmoj\GI10246-PA 617 GI10246-PA 360..445 18..104 172 35.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:37:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24357-PA 418 GL24357-PA 1..418 1..419 1576 84.7 Plus
Dper\GL26176-PA 158 GL26176-PA 37..111 18..92 174 44 Plus
Dper\GL25979-PA 289 GL25979-PA 31..116 18..104 174 36.8 Plus
Dper\GL12592-PA 154 GL12592-PA 22..104 6..90 151 38.8 Plus
Dper\GL17620-PA 165 GL17620-PA 75..147 18..90 144 39.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:37:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20525-PA 418 GA20525-PA 1..418 1..419 1576 84.9 Plus
Dpse\GA10331-PA 157 GA10331-PA 37..111 18..92 174 44 Plus
Dpse\GA10876-PA 625 GA10876-PA 367..452 18..104 173 36.8 Plus
Dpse\GA21298-PA 457 GA21298-PA 87..176 1..90 160 31.1 Plus
Dpse\GA11577-PA 154 GA11577-PA 22..104 6..90 151 38.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:37:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17877-PA 419 GM17877-PA 1..419 1..419 2107 98.3 Plus
Dsec\GM17378-PA 154 GM17378-PA 29..110 11..92 185 43.9 Plus
Dsec\GM16278-PA 596 GM16278-PA 339..424 18..104 175 35.6 Plus
Dsec\GM13669-PA 448 GM13669-PA 87..176 1..90 160 31.1 Plus
Dsec\GM15280-PA 154 GM15280-PA 22..104 6..90 148 37.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:37:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19237-PA 419 GD19237-PA 1..419 1..419 2104 98.3 Plus
Dsim\GD24233-PA 155 GD24233-PA 29..110 11..92 184 43.9 Plus
Dsim\GD23448-PA 608 GD23448-PA 351..436 18..104 175 35.6 Plus
Dsim\GD22521-PA 348 GD22521-PA 101..176 15..90 157 35.5 Plus
Dsim\GD19204-PA 154 GD19204-PA 22..104 6..90 148 37.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:37:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10336-PA 427 GJ10336-PA 1..423 1..416 1535 80.9 Plus
Dvir\GJ13600-PA 181 GJ13600-PA 23..114 5..96 177 37 Plus
Dvir\GJ18017-PA 599 GJ18017-PA 342..427 18..104 168 35.6 Plus
Dvir\GJ23276-PA 154 GJ23276-PA 22..104 6..90 151 37.6 Plus
Dvir\GJ18756-PA 154 GJ18756-PA 22..104 6..90 150 37.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:37:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14167-PA 401 GK14167-PA 2..401 1..419 1420 80.7 Plus
Dwil\GK14925-PA 158 GK14925-PA 37..111 18..92 199 49.3 Plus
Dwil\GK15272-PA 612 GK15272-PA 355..440 18..104 167 35.6 Plus
Dwil\GK18098-PA 470 GK18098-PA 101..176 15..90 161 35.5 Plus
Dwil\GK21899-PA 223 GK21899-PA 1..80 11..90 150 40 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:37:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25546-PA 414 GE25546-PA 1..414 1..419 2051 96.7 Plus
Dyak\GE13281-PA 154 GE13281-PA 29..137 11..121 187 37.9 Plus
Dyak\GE14328-PA 590 GE14328-PA 333..418 18..104 176 35.6 Plus
Dyak\GE18384-PA 448 GE18384-PA 87..176 1..90 159 31.1 Plus
Dyak\GE25514-PA 154 GE25514-PA 22..104 6..90 149 37.6 Plus

FI01908.hyp Sequence

Translation from 65 to 1324

> FI01908.hyp
MADKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFD
RESGKPKGFGFCEYKDQETALSAMRNLNGYEIGGRTLRVDNACTEKSRME
MQQLLQGPQVENPYGEPCEPEDAPELITKTVASLPPEQMYELMKQMKLCI
VSNPSEARQMLMLNPQLAYALLQAMVVMRIVDPQQALGMLFKANQMPPVL
GGNPHQGPGNHTMMGQQQVPQQQVQIPQQQQQAPQPPMPVPGPGFPANVH
PNDIDLRMVPGGPMPMDPRMMGRGMDQDLRASLPNPVPPPLMDPRARAQM
PPQQQQGVPQAPPAPYPSDPRQRPMDPRLRAGPGPQQQAPPQGIPQAPPP
TQQQQAAAQQLQSRLGAHGVLPSDASDQEKAALIMQVLQLSDEQIAQLPS
EQRVSIVMLKEQIAKSTQR*

FI01908.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:15:47
Subject Length Description Subject Range Query Range Score Percent Strand
CstF-64-PA 419 CG7697-PA 1..419 1..419 2192 100 Plus
CG10466-PB 154 CG10466-PB 29..137 11..121 178 37.8 Plus
CG10466-PA 154 CG10466-PA 29..137 11..121 178 37.8 Plus
Caper-PB 594 CG11266-PB 337..422 18..104 164 35.6 Plus
Caper-PA 594 CG11266-PA 337..422 18..104 164 35.6 Plus