Clone FI01963 Report

Search the DGRC for FI01963

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:19
Well:63
Vector:pFlc-1
Associated Gene/TranscriptAnce-4-RA
Protein status:FI01963.pep: gold
Sequenced Size:1968

Clone Sequence Records

FI01963.complete Sequence

1968 bp assembled on 2010-09-20

GenBank Submission: BT125666.1

> FI01963.complete
CCCAGCTCAGTTCGAGCAGATCCGGTGTTGAGTGCGAAAGTGAAACCGAT
TCCCGAGGAGATGGGCCTGCTGCTGCTTCTGGTGCTGATAGCGGGCATTG
GCTGCGCAACTGCAGCAGCCAACATTGACCTGGAGGCCAAGACGTTTGTG
AATCAATCGAGCGATCGCTACTACAGGTTCTATAATGAGATTGCCGCCGA
AACGTATTCGGCCAACAACGAAGAGGACTTCGATGCCCTTTTCTCCAAAC
TAAACAATGTGAAGCGGATTGCCGAGGAGCTGGTGAGCATCTCCCGGCAG
GCTGCGACCTACGATCTGGACAGGATTCGCAGCCCGCAGACGAAGATGGC
CCTCCAGGAGCTGCGCACTGCGGGTGACTTGTTCGTCCTGGGCGACGACT
ATTTCTCCTCCGTACAGATGAACTTGGCTGCGCTGCAAACACTTTCCACG
GACAAGGACATCGAGCCGTATCTTGGTGGGGCCAATATGCCCAACGAGGA
CGACAGTCCGCTGGCCTATTTCCCAGACATCCAGAAGATCGTGCAGAGCA
GCAAGGATGCCGACGAGCTGAAGTACTATTGGGAGGCCTGGCGGGATAAG
AACCAGCTGTGGGCCTCCCTCAACTTCTACACCATAGTGCAGTCTTACCA
GAGGGCCGCCAAGATCCTGGAGGTGCCGGTGCACAAACTGTGGTACCGAT
ACGACAGCCAAGAGATGCTGCAGCAGATGGAGCAGGCGATGACGGAGCTG
CGCCCCGCATACCAGCAGCTCCACGCCTTTGTCCGCCAGGAGCTGCATAA
GAAGTACGGCTCCGATGTGGTCAATCTCAATGGACCGATACCGGATCACC
TGTTCCAGCAGGTTCTCGAACAGGCCTGGGCCAGTGGCAGCATCCTGGAG
GATTACTACCCGCGTGCCCAGTTGCCGGAGTTCGATGAGTACGTTAGTCA
CTTGACCGCCAAGACCATGGTGAACGAGTCCGAAAACTTCTACACTTCGC
TGGGCTTCGAGCCTCTGTCCGCCGAGTTCCACAAGAATCAGCTGAAGGAA
CCCAACCAGGACAGCCCCAACGACGACTGTCGCCCCTCCATCTTTGACCT
CACGCCACACGTGTACCTTATGTACTGCGAGAAGGTCAGCTTCCGGAAGC
TGATGCAGTACCACAGCCACATGGCCAGGGTTTACTACGCCCAGCAGAAG
AGTCACCTGCCCTCCTACTACTTTAAGGCCTACAACCTGGAGTTCGCCGT
CGGCGAGGCGGTGGTCCTATCCGCATCGTCACCGGCTCATCTGACAGGTC
GCCGACTGGCCAAGGAAGTGCTTAGTGAAACGGCCCTCATGAGCCGCCTA
TTCCGTATGGCCATCCACACGATTCTTAGTATTCCGCTGTACTATGTGCA
CACCAAGGTGATGCACGATCTTCTCAACGATACTGTGGACATGGACACCG
TGAACAAGCACTATTGGAGGCTCATGGAGCAACATGCGGGCATCGAGGCG
CCCTCGGATCGCTCTGAAGGTGCCATTGATTTCCCCTACAAGTTCTACGT
GAACATCGACCAGAGTTTCCAGACTCAGAAATTCATATCGGAAGTTCTGG
GATATCAGTTCTATCGCGAGTTCTGCAAGAAGAGTTACAACAGGGGGCCG
CTCCACAACTGCGACTTCTATGGAAGCTTGGCCGTTGGCAATGATTTAAA
AGCAATGATGTCATTGGGTTCTACGAAACCATGGAAACAGGTGGTTGGCA
AAATACTGCCCAATAACACGGGACTGAGTAGCTTGGCTCTGCTGGAGTAC
TATCAACCTGTGTTGGACTGGCTCAATAAATACAATAAGGATGCCAACTC
GAAAATTGGATGGACTGCCTCCAAAAAAAAAATCGTTTGAGGACTTCCAA
TGAAGAGATTTATAAGATTTAAATACAAATAAAATACATACCACCACCTT
AATAAAAAAAAAAAAAAA

FI01963.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:50:44
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 4928120..4929377 1360..103 6245 99.8 Minus
chr2R 21145070 chr2R 4927838..4928057 1578..1359 1100 100 Minus
chr2R 21145070 chr2R 4927425..4927603 1879..1701 895 100 Minus
chr2R 21145070 chr2R 4927662..4927784 1700..1578 615 100 Minus
chr2R 21145070 chr2R 4929612..4929708 102..6 485 100 Minus
chr2R 21145070 chr2R 4927294..4927367 1953..1880 355 98.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:50:42
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9040554..9041811 1360..103 6290 100 Minus
2R 25286936 2R 9040272..9040491 1578..1359 1100 100 Minus
2R 25286936 2R 9039859..9040037 1879..1701 895 100 Minus
2R 25286936 2R 9040096..9040218 1700..1578 615 100 Minus
2R 25286936 2R 9042046..9042142 102..6 485 100 Minus
2R 25286936 2R 9039725..9039801 1956..1880 385 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:59:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 9041753..9043010 1360..103 6290 100 Minus
2R 25260384 2R 9041471..9041690 1578..1359 1100 100 Minus
2R 25260384 2R 9041058..9041236 1879..1701 895 100 Minus
2R 25260384 2R 9041295..9041417 1700..1578 615 100 Minus
2R 25260384 2R 9043245..9043341 102..6 485 100 Minus
2R 25260384 2R 9040924..9041000 1956..1880 385 100 Minus
Blast to na_te.dros performed 2019-03-17 00:50:42
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1169..1231 1872..1940 114 69.6 Plus
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 2386..2431 1908..1953 113 71.7 Plus

FI01963.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:51:40 Download gff for FI01963.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 4927294..4927367 1880..1953 98 <- Minus
chr2R 4927425..4927603 1701..1879 100 <- Minus
chr2R 4927662..4927784 1578..1700 100 <- Minus
chr2R 4927839..4928056 1360..1577 100 <- Minus
chr2R 4928121..4929377 103..1359 99 <- Minus
chr2R 4929612..4929711 1..102 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-09-20 15:34:41 Download gff for FI01963.complete
Subject Subject Range Query Range Percent Splice Strand
Ance-4-RA 1..1830 61..1890 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:41:34 Download gff for FI01963.complete
Subject Subject Range Query Range Percent Splice Strand
Ance-4-RA 1..1830 61..1890 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:16:49 Download gff for FI01963.complete
Subject Subject Range Query Range Percent Splice Strand
Ance-4-RA 1..1830 61..1890 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:38:38 Download gff for FI01963.complete
Subject Subject Range Query Range Percent Splice Strand
Ance-4-RA 1..1830 61..1890 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-20 15:34:40 Download gff for FI01963.complete
Subject Subject Range Query Range Percent Splice Strand
Ance-4-RA 1..1948 6..1953 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:41:34 Download gff for FI01963.complete
Subject Subject Range Query Range Percent Splice Strand
Ance-4-RA 1..1948 6..1953 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:16:49 Download gff for FI01963.complete
Subject Subject Range Query Range Percent Splice Strand
Ance-4-RA 1..1948 6..1953 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:38:38 Download gff for FI01963.complete
Subject Subject Range Query Range Percent Splice Strand
Ance-4-RA 1..1948 6..1953 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:51:40 Download gff for FI01963.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9039728..9039801 1880..1953 100 <- Minus
2R 9039859..9040037 1701..1879 100 <- Minus
2R 9040096..9040218 1578..1700 100 <- Minus
2R 9040273..9040490 1360..1577 100 <- Minus
2R 9040555..9041811 103..1359 100 <- Minus
2R 9042046..9042145 1..102 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:51:40 Download gff for FI01963.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9039728..9039801 1880..1953 100 <- Minus
2R 9039859..9040037 1701..1879 100 <- Minus
2R 9040096..9040218 1578..1700 100 <- Minus
2R 9040273..9040490 1360..1577 100 <- Minus
2R 9040555..9041811 103..1359 100 <- Minus
2R 9042046..9042145 1..102 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:51:40 Download gff for FI01963.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9039728..9039801 1880..1953 100 <- Minus
2R 9039859..9040037 1701..1879 100 <- Minus
2R 9040096..9040218 1578..1700 100 <- Minus
2R 9040273..9040490 1360..1577 100 <- Minus
2R 9040555..9041811 103..1359 100 <- Minus
2R 9042046..9042145 1..102 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:16:49 Download gff for FI01963.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4927233..4927306 1880..1953 100 <- Minus
arm_2R 4927601..4927723 1578..1700 100 <- Minus
arm_2R 4927364..4927542 1701..1879 100 <- Minus
arm_2R 4929551..4929650 1..102 97   Minus
arm_2R 4927778..4927995 1360..1577 100 <- Minus
arm_2R 4928060..4929316 103..1359 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:44:59 Download gff for FI01963.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9041472..9041689 1360..1577 100 <- Minus
2R 9041754..9043010 103..1359 100 <- Minus
2R 9043245..9043344 1..102 97   Minus
2R 9040927..9041000 1880..1953 100 <- Minus
2R 9041058..9041236 1701..1879 100 <- Minus
2R 9041295..9041417 1578..1700 100 <- Minus

FI01963.pep Sequence

Translation from 0 to 1889

> FI01963.pep
PSSVRADPVLSAKVKPIPEEMGLLLLLVLIAGIGCATAAANIDLEAKTFV
NQSSDRYYRFYNEIAAETYSANNEEDFDALFSKLNNVKRIAEELVSISRQ
AATYDLDRIRSPQTKMALQELRTAGDLFVLGDDYFSSVQMNLAALQTLST
DKDIEPYLGGANMPNEDDSPLAYFPDIQKIVQSSKDADELKYYWEAWRDK
NQLWASLNFYTIVQSYQRAAKILEVPVHKLWYRYDSQEMLQQMEQAMTEL
RPAYQQLHAFVRQELHKKYGSDVVNLNGPIPDHLFQQVLEQAWASGSILE
DYYPRAQLPEFDEYVSHLTAKTMVNESENFYTSLGFEPLSAEFHKNQLKE
PNQDSPNDDCRPSIFDLTPHVYLMYCEKVSFRKLMQYHSHMARVYYAQQK
SHLPSYYFKAYNLEFAVGEAVVLSASSPAHLTGRRLAKEVLSETALMSRL
FRMAIHTILSIPLYYVHTKVMHDLLNDTVDMDTVNKHYWRLMEQHAGIEA
PSDRSEGAIDFPYKFYVNIDQSFQTQKFISEVLGYQFYREFCKKSYNRGP
LHNCDFYGSLAVGNDLKAMMSLGSTKPWKQVVGKILPNNTGLSSLALLEY
YQPVLDWLNKYNKDANSKIGWTASKKKIV*

FI01963.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 10:36:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12717-PA 611 GF12717-PA 6..611 24..629 2894 86 Plus
Dana\GF11532-PA 638 GF11532-PA 147..633 159..625 619 31.1 Plus
Dana\GF14268-PA 615 GF14268-PA 3..614 24..629 600 28.6 Plus
Dana\GF15534-PA 631 GF15534-PA 10..620 21..626 511 25.5 Plus
Dana\GF14269-PA 613 GF14269-PA 142..612 168..621 444 27.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 10:36:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10593-PA 608 GG10593-PA 1..608 21..629 3177 95.9 Plus
Dere\GG19880-PA 628 GG19880-PA 137..623 159..625 609 30.4 Plus
Dere\GG23895-PA 615 GG23895-PA 143..613 171..628 591 31.7 Plus
Dere\GG23898-PA 844 GG23898-PA 331..794 171..622 565 30.9 Plus
Dere\GG25294-PA 630 GG25294-PA 26..619 37..626 495 26.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 10:36:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20259-PA 660 GH20259-PA 14..618 30..626 2555 74.2 Plus
Dgri\GH21978-PA 633 GH21978-PA 136..626 152..623 693 33.9 Plus
Dgri\GH11125-PA 615 GH11125-PA 143..613 171..628 589 31.9 Plus
Dgri\GH11127-PA 851 GH11127-PA 337..800 171..622 547 30.2 Plus
Dgri\GH10960-PA 632 GH10960-PA 15..621 25..626 484 25.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:46:27
Subject Length Description Subject Range Query Range Score Percent Strand
Ance-4-PA 609 CG8196-PA 1..609 21..629 3195 100 Plus
Ance-4-PB 514 CG8196-PB 1..514 116..629 2726 100 Plus
Ance-5-PA 628 CG10142-PA 142..623 164..625 610 30.1 Plus
Ance-PC 615 CG8827-PC 3..611 24..626 607 27.9 Plus
Ance-PB 615 CG8827-PB 3..611 24..626 607 27.9 Plus
Ance-PA 615 CG8827-PA 3..611 24..626 607 27.9 Plus
Ance-3-PC 844 CG17988-PC 331..793 171..621 572 31.3 Plus
Ance-3-PB 844 CG17988-PB 331..793 171..621 572 31.3 Plus
Acer-PB 630 CG10593-PB 11..619 23..626 528 25.4 Plus
Acer-PA 630 CG10593-PA 11..619 23..626 528 25.4 Plus
Ance-2-PA 611 CG16869-PA 10..611 33..622 457 25.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 10:36:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19428-PA 615 GI19428-PA 13..615 30..629 2629 77.4 Plus
Dmoj\GI19680-PA 626 GI19680-PA 132..624 152..625 684 32.9 Plus
Dmoj\GI12636-PA 615 GI12636-PA 143..613 171..628 562 30.9 Plus
Dmoj\GI12647-PA 847 GI12647-PA 338..801 171..622 543 30.2 Plus
Dmoj\GI10464-PA 630 GI10464-PA 1..619 21..626 482 26.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 10:36:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16859-PA 611 GL16859-PA 6..611 25..629 2749 81 Plus
Dper\GL10903-PA 642 GL10903-PA 165..635 170..623 618 32.1 Plus
Dper\GL21248-PA 615 GL21248-PA 143..613 171..628 617 32.6 Plus
Dper\GL21244-PA 615 GL21244-PA 143..614 171..629 604 32.3 Plus
Dper\GL21072-PA 615 GL21072-PA 156..614 184..629 573 31.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 10:36:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20888-PA 611 GA20888-PA 6..611 25..629 2746 81 Plus
Dpse\GA10105-PA 642 GA10105-PA 165..635 170..623 618 32.1 Plus
Dpse\GA28777-PA 615 GA28777-PA 143..614 171..629 601 32.3 Plus
Dpse\GA28780-PA 846 GA28780-PA 336..799 171..622 559 30.2 Plus
Dpse\GA27806-PA 553 GA27806-PA 143..549 171..563 510 32.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 10:36:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20639-PA 608 GM20639-PA 1..608 21..629 3230 97.9 Plus
Dsec\GM23431-PA 363 GM23431-PA 1..363 181..543 1952 98.6 Plus
Dsec\GM11782-PA 628 GM11782-PA 152..623 171..625 608 30.3 Plus
Dsec\GM15352-PA 615 GM15352-PA 31..613 41..628 577 28.3 Plus
Dsec\GM15385-PA 844 GM15385-PA 331..794 171..622 570 31.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 10:36:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10112-PA 608 GD10112-PA 1..608 21..629 3251 98.9 Plus
Dsim\GD24910-PA 628 GD24910-PA 142..623 164..625 601 30.1 Plus
Dsim\Ance-PA 615 GD23936-PA 31..613 41..628 577 28.3 Plus
Dsim\GD23554-PA 630 GD23554-PA 11..619 23..626 512 25.6 Plus
Dsim\GD23939-PA 628 GD23939-PA 162..578 171..622 444 27.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 10:36:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21182-PA 615 GJ21182-PA 9..615 24..629 2634 76.3 Plus
Dvir\GJ17191-PA 628 GJ17191-PA 131..623 152..625 673 32.9 Plus
Dvir\GJ18156-PA 615 GJ18156-PA 137..613 165..628 610 33 Plus
Dvir\GJ18158-PA 849 GJ18158-PA 340..803 171..622 547 30.4 Plus
Dvir\GJ21681-PA 633 GJ21681-PA 35..622 44..626 480 26.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 10:36:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17811-PA 1237 GK17811-PA 17..610 36..626 2529 76.4 Plus
Dwil\GK20737-PA 634 GK20737-PA 143..627 159..623 650 32.3 Plus
Dwil\GK15019-PA 616 GK15019-PA 144..615 171..629 581 31.6 Plus
Dwil\GK15020-PA 838 GK15020-PA 325..788 171..622 538 29.6 Plus
Dwil\GK18674-PA 632 GK18674-PA 9..621 24..626 527 26.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 10:36:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22653-PA 608 GE22653-PA 1..608 21..629 3179 96.2 Plus
Dyak\GE11404-PA 628 GE11404-PA 152..623 171..625 608 30.3 Plus
Dyak\GE18694-PA 615 GE18694-PA 31..613 41..628 585 28.6 Plus
Dyak\GE19012-PA 842 GE19012-PA 329..792 171..622 567 31.1 Plus
Dyak\GE18785-PA 630 GE18785-PA 11..619 23..626 510 25.4 Plus

FI01963.hyp Sequence

Translation from 3 to 1889

> FI01963.hyp
TSVRADPVLSAKVKPIPEEMGLLLLLVLIAGIGCATAAANIDLEAKTFVN
QSSDRYYRFYNEIAAETYSANNEEDFDALFSKLNNVKRIAEELVSISRQA
ATYDLDRIRSPQTKMALQELRTAGDLFVLGDDYFSSVQMNLAALQTLSTD
KDIEPYLGGANMPNEDDSPLAYFPDIQKIVQSSKDADELKYYWEAWRDKN
QLWASLNFYTIVQSYQRAAKILEVPVHKLWYRYDSQEMLQQMEQAMTELR
PAYQQLHAFVRQELHKKYGSDVVNLNGPIPDHLFQQVLEQAWASGSILED
YYPRAQLPEFDEYVSHLTAKTMVNESENFYTSLGFEPLSAEFHKNQLKEP
NQDSPNDDCRPSIFDLTPHVYLMYCEKVSFRKLMQYHSHMARVYYAQQKS
HLPSYYFKAYNLEFAVGEAVVLSASSPAHLTGRRLAKEVLSETALMSRLF
RMAIHTILSIPLYYVHTKVMHDLLNDTVDMDTVNKHYWRLMEQHAGIEAP
SDRSEGAIDFPYKFYVNIDQSFQTQKFISEVLGYQFYREFCKKSYNRGPL
HNCDFYGSLAVGNDLKAMMSLGSTKPWKQVVGKILPNNTGLSSLALLEYY
QPVLDWLNKYNKDANSKIGWTASKKKIV*

FI01963.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:27:11
Subject Length Description Subject Range Query Range Score Percent Strand
Ance-4-PA 609 CG8196-PA 1..609 20..628 3195 100 Plus
Ance-4-PB 514 CG8196-PB 1..514 115..628 2726 100 Plus
Ance-5-PA 628 CG10142-PA 142..623 163..624 610 30.1 Plus
Ance-PC 615 CG8827-PC 3..611 23..625 607 27.9 Plus
Ance-PB 615 CG8827-PB 3..611 23..625 607 27.9 Plus