BDGP Sequence Production Resources |
Search the DGRC for FI02012
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 20 |
Well: | 12 |
Vector: | pFlc-1 |
Associated Gene/Transcript | HPS4-RB |
Protein status: | FI02012.pep: gold |
Sequenced Size: | 3421 |
Gene | Date | Evidence |
---|---|---|
CG4966 | 2008-12-18 | 5.12 accounting |
3421 bp assembled on 2008-10-24
GenBank Submission: BT050428.1
> FI02012.complete ACTGAGGTATGGCAGCGCCGTAAGTTCCTCTGCAAAGAAAAATAAAAACT AATGAATAAAATGAAGCAGAAATAAAGTGCAATAATCTTCCGACAACGAG AGGTTACAAGTGCAATACACAATGGCTGCAAAGGAGACGATGATTGTGTT TGTCTACGACACAGAGTGTCTCACAGACGAGGCGGATGATCCCATATCGG CGGTGCTCTACTTCCATCCAAGCTGGGTGTCCGACTCCCAGAAGGTGGCT CTGTGTGGTCAGCTTATGGGCACGTCGTATTTCCTCAAGGATTGCTTCTT TAATCCCCGCATCCTGGCGCTGCAGAATGGAAAATTTGTGCTGAAGGAAT TCGGTCGTTTTATTCTGGCAATTGGCACTGATCGAAATATTGGAGATCAA CTGTTGGAACATCGTGCTGATCTGCTGAGTTCCCTGCTCAAGTTTTTCCA CCGTGACGTCCAGACATTGTATGCCCAGTATGCTGCACCGCCCGCCCTGA ACCGCCGGAATCTCAGCGAGAAACTGTACCACATCTTTGAAACATATCTG CCGATGCTGCAGCGCAACGGAAATACATTTCAAAATGTGCCGAGGCTGCG AATGCCAAAGACGGCCAGTCATATATTCCTGGAGGCTATACAAACGTTGC AAAGTTGCCAGCAGACAAAGGGAATACTTGGCGGAGCGATTCTGTACCAC AACAAGGTGGTTGCCTCGCAACTGAGCGATATGGTGACCAAGCATCTTGT ACTCACCGATCCTCTGCACATCCGCACTGCGGCCGAGCAAGTGACCAACC ATCCTGAGTTCCACATACCCAACGGCGTTCAGATGCTGGTGGTTTATTTG GAGCATATGCAGTACCGCCAGTTAGCTGGCGAGGCACAGCGCGCCCAGAA CCTGCAGATGAACACAGCTCAGCTCACCCAAAATGGTATGCCGTTTCAGT ATGCCAAGCGTAAGATAAAGCGGGACAAGTCGCTCATTTTTACCCATATA CCCGAGGAGGAGCACGCCCCGGAGCAGCAGGGAGCAGTTGAACAGCTACC ACCAGCCAGGCCCAAATCTATGCGACCCACCCACCTGCCGTTGCGTATAA AAAGCATGCAGAGCAAAGAGCTACCGGAGTCTGGCATTGCATCAATAAAT TTCGACGAAACCGATTCCTATCCGCAGTTCATTGGACGAACCAGCGTTTG CAATACTCCAATGACCGAGAACAAGGTACTGCCGGTGGCCAATGTTATGT CCATTTGCGCAAATCCCGAAGATGAGGGCAAAGAGGAGGATATTCACAAT TCCAATGGCAAGACACATTCGCGTCGAAATTCTCTAAAAGTGGATGTGGA GAAATTCTTTCAAAACTTCATTAGCAATCCAAACAAACAGCTCACACGAC GCAAATCATCTGCAGACCTGCAGGATGCACTTCGCGCCATCTCCAAGAAA CTGAATAATTTTACGCATGGCCTCAAAACCGATGTGAATCGAAATGGAAG CGGTAATGGTGATGTCTCTTCGGATTCGCCAGATTTCATAGAGGACGATG ATAAGATTACTTCGCGGACCATCAGCGATCCCACCTATCCGGTATTCAAC ACTAACGGCCAGCAGATCTCGCGCAGTTTGTTTCAGCAATTTCTGGATCA GTATCGTAAATTGTGGGGTGTTGCTAGTGAGCAGGCGCACGAGGATGCCG AGCTAGCCGCTCTGGTAGCCGAGTTCCAGGAGTTCAACGCCGAGATCCAA AAGCTCGACGAGCACATGAGACAGCAAGCAGCGGAAGCATCGTCTGCCGA TAGGAATCTCAACGTTTCCGCAGCCAAAACTCCGCTGGACAAGCGATCCA TGACGCTGCCATTGAAATCAGCAGGAGAATCTACTTTCGGAGAGCGTGCG TCCGGACGCAGTGGAGCTGGTGGAGTACCACTAACACCCCTGATGGCCAA ACTATCTGTTCTGGCTCTAAGCGAAACAACGCCCATCGAGATACAAACTC CGCTGACAACCAGTAAGGTTTTCCCACGGCGAAGTTCACTGAAGTGCGAG GATGCAGTGGATGCATTGGCTGCCTTGACCACAGCCCCTGCTCAACCTCC GGGTCCAATTCAACCAGATGGCTTGCAAAGAACTGAACTCTATATATGCG GACAGCAGAATATGACCTTATTATTGCTCATGGAGGAGGGTACTTGTCAA CAACAGCAGGTTGTGCAGAAGATGTTCGACATTTGTGTGGCCAAGTTCCC GCACATGGAATCTCAACTGAATCAAACCTTAAATGTAAATGTGGAGGGCG ACAATCGCGACGGGAGCAACTATAGCTTCATGTGCGTGGACTCCAAGTGG GATGTTCTGCAGCGGAATGGCCCTTGGAATCCCCTAGAGCTTAATATCCT CGAGAGCATGCACTCGATACATTCCAGTGGTCATCATCTTACAGATTTGA TCTTGAGATCCAACGACTCCGTTTATTATGGCCATAAGAATGGAAGGACC GAGTTCTTCTACAAGGAACCTACCCATCAGATCAATGGCATACCACCGCC CTCGGATCCGATTGGCAATATACAATCCCGCGCCAAGTCGCGACTGGAAC GTGATCATTCCTACATGCTGTTCTAGGCTGTGCAATGGATCGTATATTAT AAACATATTTAAATACTCGCATGCTTAGCCAAAAACAGATAATGTAATCG GGGACACCAGATAGTCTGGGTCCCCGAAGAATAGCCAACTTAATGCCATC CACTGTTATTTCATTTGCGATCTCTGGCTGATTCCTTCGTGAGTCTTTTC TTTTGTATAGTGGTTAGATAATGATTCCATATCATATACAATGCAAACCA AGGGAACTCAATTTTAAACGATCTAAATTTTACTTCGACTTTTATACAAC AAATTTATAAGAAACATTGCCGACCTTTTTTACCGCCATTCAATGGACTC ACGAAGGAAACCAAAAGAATTTTAGATATGCCGCTTACAGCCAGCGAAAT ATTAAGCCTTGTTTGAATTTTCACTTGATTGATGTAAAGTACAAAAATGT TTTAAGCTTTGTTTACAATGTCCAGCACTGTTGTTTAATTTATAAGCTTG TATCCTATACAATTATTTTAATCATTTTGCATTTGCTTTGACCGAAAAGA TGCGACATTTTGCACTGATTTCGAGAGCCAAAGAATTTAAATCAAGGTTT TTAATTGTAAATATACATTATACAAAATTAGATTCATTTAAATGGAATAA TGTGTAACTAACCTAAAATTCACACAGATTCCGTTCTGTCCAGTTGCAAA CATAAACCTATCTTAGCTGTTTCTCATTATCAAAGATTAAGCGCTTTGTG CCAATTTAAATGCAGGATAAATGCTTAAAATAAACCGTCAAATATGTAGG AACGTGAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4966-RB | 3588 | CG4966-RB | 84..3490 | 1..3407 | 17020 | 99.9 | Plus |
CG4966-RA | 3627 | CG4966-RA | 230..3504 | 133..3407 | 16375 | 100 | Plus |
CG4966-RC | 3383 | CG4966-RC | 110..3383 | 133..3406 | 16370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 13575109..13576627 | 706..2224 | 7565 | 99.9 | Plus |
chr2R | 21145070 | chr2R | 13576974..13577924 | 2456..3406 | 4710 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 13574657..13574900 | 367..610 | 1190 | 99.2 | Plus |
chr2R | 21145070 | chr2R | 13574360..13574595 | 133..368 | 1180 | 100 | Plus |
chr2R | 21145070 | chr2R | 13576684..13576917 | 2224..2457 | 1170 | 100 | Plus |
chr2R | 21145070 | chr2R | 13570699..13570831 | 1..133 | 650 | 99.2 | Plus |
chr2R | 21145070 | chr2R | 13574954..13575051 | 609..706 | 490 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17688007..17689525 | 706..2224 | 7595 | 100 | Plus |
2R | 25286936 | 2R | 17689872..17690823 | 2456..3407 | 4760 | 100 | Plus |
2R | 25286936 | 2R | 17687555..17687798 | 367..610 | 1220 | 100 | Plus |
2R | 25286936 | 2R | 17687258..17687493 | 133..368 | 1180 | 100 | Plus |
2R | 25286936 | 2R | 17689582..17689815 | 2224..2457 | 1170 | 100 | Plus |
2R | 25286936 | 2R | 17683597..17683729 | 1..133 | 650 | 99.2 | Plus |
2R | 25286936 | 2R | 17687852..17687949 | 609..706 | 490 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17689206..17690724 | 706..2224 | 7595 | 100 | Plus |
2R | 25260384 | 2R | 17691071..17692022 | 2456..3407 | 4760 | 100 | Plus |
2R | 25260384 | 2R | 17688754..17688997 | 367..610 | 1220 | 100 | Plus |
2R | 25260384 | 2R | 17688457..17688692 | 133..368 | 1180 | 100 | Plus |
2R | 25260384 | 2R | 17690781..17691014 | 2224..2457 | 1170 | 100 | Plus |
2R | 25260384 | 2R | 17684796..17684928 | 1..133 | 650 | 99.2 | Plus |
2R | 25260384 | 2R | 17689051..17689148 | 609..706 | 490 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 1321..1580 | 3259..3012 | 128 | 54.2 | Minus |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 925..1054 | 3134..3000 | 123 | 57 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13570699..13570830 | 1..132 | 99 | -> | Plus |
chr2R | 13574360..13574594 | 133..367 | 100 | -> | Plus |
chr2R | 13574658..13574900 | 368..610 | 99 | -> | Plus |
chr2R | 13574956..13575050 | 611..705 | 100 | -> | Plus |
chr2R | 13575109..13576627 | 706..2224 | 99 | -> | Plus |
chr2R | 13576685..13576917 | 2225..2457 | 100 | -> | Plus |
chr2R | 13576976..13577924 | 2458..3406 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4966-RB | 1..2505 | 122..2626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HPS4-RB | 1..2505 | 122..2626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HPS4-RB | 1..2505 | 122..2626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HPS4-RB | 1..2505 | 122..2626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4966-RB | 1..3406 | 1..3406 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HPS4-RB | 1..3406 | 1..3406 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HPS4-RB | 24..3429 | 1..3406 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4966-RB | 1..3406 | 1..3406 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HPS4-RB | 24..3429 | 1..3406 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17687258..17687492 | 133..367 | 100 | -> | Plus |
2R | 17683597..17683728 | 1..132 | 99 | -> | Plus |
2R | 17687556..17687798 | 368..610 | 100 | -> | Plus |
2R | 17687854..17687948 | 611..705 | 100 | -> | Plus |
2R | 17688007..17689525 | 706..2224 | 100 | -> | Plus |
2R | 17689583..17689815 | 2225..2457 | 100 | -> | Plus |
2R | 17689874..17690822 | 2458..3406 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17687258..17687492 | 133..367 | 100 | -> | Plus |
2R | 17683597..17683728 | 1..132 | 99 | -> | Plus |
2R | 17687556..17687798 | 368..610 | 100 | -> | Plus |
2R | 17687854..17687948 | 611..705 | 100 | -> | Plus |
2R | 17688007..17689525 | 706..2224 | 100 | -> | Plus |
2R | 17689583..17689815 | 2225..2457 | 100 | -> | Plus |
2R | 17689874..17690822 | 2458..3406 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17687258..17687492 | 133..367 | 100 | -> | Plus |
2R | 17683597..17683728 | 1..132 | 99 | -> | Plus |
2R | 17687556..17687798 | 368..610 | 100 | -> | Plus |
2R | 17687854..17687948 | 611..705 | 100 | -> | Plus |
2R | 17688007..17689525 | 706..2224 | 100 | -> | Plus |
2R | 17689583..17689815 | 2225..2457 | 100 | -> | Plus |
2R | 17689874..17690822 | 2458..3406 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13571102..13571233 | 1..132 | 99 | -> | Plus |
arm_2R | 13577088..13577320 | 2225..2457 | 100 | -> | Plus |
arm_2R | 13574763..13574997 | 133..367 | 100 | -> | Plus |
arm_2R | 13575061..13575303 | 368..610 | 100 | -> | Plus |
arm_2R | 13575359..13575453 | 611..705 | 100 | -> | Plus |
arm_2R | 13575512..13577030 | 706..2224 | 100 | -> | Plus |
arm_2R | 13577379..13578327 | 2458..3406 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17688457..17688691 | 133..367 | 100 | -> | Plus |
2R | 17688755..17688997 | 368..610 | 100 | -> | Plus |
2R | 17689053..17689147 | 611..705 | 100 | -> | Plus |
2R | 17689206..17690724 | 706..2224 | 100 | -> | Plus |
2R | 17690782..17691014 | 2225..2457 | 100 | -> | Plus |
2R | 17691073..17692021 | 2458..3406 | 100 | Plus | |
2R | 17684796..17684927 | 1..132 | 99 | -> | Plus |
Translation from 121 to 2625
> FI02012.pep MAAKETMIVFVYDTECLTDEADDPISAVLYFHPSWVSDSQKVALCGQLMG TSYFLKDCFFNPRILALQNGKFVLKEFGRFILAIGTDRNIGDQLLEHRAD LLSSLLKFFHRDVQTLYAQYAAPPALNRRNLSEKLYHIFETYLPMLQRNG NTFQNVPRLRMPKTASHIFLEAIQTLQSCQQTKGILGGAILYHNKVVASQ LSDMVTKHLVLTDPLHIRTAAEQVTNHPEFHIPNGVQMLVVYLEHMQYRQ LAGEAQRAQNLQMNTAQLTQNGMPFQYAKRKIKRDKSLIFTHIPEEEHAP EQQGAVEQLPPARPKSMRPTHLPLRIKSMQSKELPESGIASINFDETDSY PQFIGRTSVCNTPMTENKVLPVANVMSICANPEDEGKEEDIHNSNGKTHS RRNSLKVDVEKFFQNFISNPNKQLTRRKSSADLQDALRAISKKLNNFTHG LKTDVNRNGSGNGDVSSDSPDFIEDDDKITSRTISDPTYPVFNTNGQQIS RSLFQQFLDQYRKLWGVASEQAHEDAELAALVAEFQEFNAEIQKLDEHMR QQAAEASSADRNLNVSAAKTPLDKRSMTLPLKSAGESTFGERASGRSGAG GVPLTPLMAKLSVLALSETTPIEIQTPLTTSKVFPRRSSLKCEDAVDALA ALTTAPAQPPGPIQPDGLQRTELYICGQQNMTLLLLMEEGTCQQQQVVQK MFDICVAKFPHMESQLNQTLNVNVEGDNRDGSNYSFMCVDSKWDVLQRNG PWNPLELNILESMHSIHSSGHHLTDLILRSNDSVYYGHKNGRTEFFYKEP THQINGIPPPSDPIGNIQSRAKSRLERDHSYMLF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11663-PA | 862 | GF11663-PA | 24..862 | 1..834 | 4011 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21810-PA | 857 | GG21810-PA | 28..857 | 4..834 | 4392 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20764-PA | 874 | GH20764-PA | 31..874 | 1..834 | 3591 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HPS4-PB | 834 | CG4966-PB | 1..834 | 1..834 | 4339 | 100 | Plus |
HPS4-PA | 858 | CG4966-PA | 25..858 | 1..834 | 4324 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20844-PA | 875 | GI20844-PA | 32..875 | 1..834 | 3556 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16791-PA | 874 | GL16791-PA | 30..874 | 4..834 | 3280 | 73.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18559-PA | 874 | GA18559-PA | 27..874 | 1..834 | 3282 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21812-PA | 858 | GM21812-PA | 25..858 | 1..834 | 4461 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11303-PA | 857 | GD11303-PA | 25..857 | 1..834 | 4470 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20582-PA | 869 | GJ20582-PA | 30..869 | 1..834 | 3550 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15664-PA | 872 | GK15664-PA | 25..872 | 5..834 | 3645 | 81.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11887-PA | 857 | GE11887-PA | 25..857 | 1..834 | 4403 | 97.5 | Plus |
Translation from 121 to 2625
> FI02012.hyp MAAKETMIVFVYDTECLTDEADDPISAVLYFHPSWVSDSQKVALCGQLMG TSYFLKDCFFNPRILALQNGKFVLKEFGRFILAIGTDRNIGDQLLEHRAD LLSSLLKFFHRDVQTLYAQYAAPPALNRRNLSEKLYHIFETYLPMLQRNG NTFQNVPRLRMPKTASHIFLEAIQTLQSCQQTKGILGGAILYHNKVVASQ LSDMVTKHLVLTDPLHIRTAAEQVTNHPEFHIPNGVQMLVVYLEHMQYRQ LAGEAQRAQNLQMNTAQLTQNGMPFQYAKRKIKRDKSLIFTHIPEEEHAP EQQGAVEQLPPARPKSMRPTHLPLRIKSMQSKELPESGIASINFDETDSY PQFIGRTSVCNTPMTENKVLPVANVMSICANPEDEGKEEDIHNSNGKTHS RRNSLKVDVEKFFQNFISNPNKQLTRRKSSADLQDALRAISKKLNNFTHG LKTDVNRNGSGNGDVSSDSPDFIEDDDKITSRTISDPTYPVFNTNGQQIS RSLFQQFLDQYRKLWGVASEQAHEDAELAALVAEFQEFNAEIQKLDEHMR QQAAEASSADRNLNVSAAKTPLDKRSMTLPLKSAGESTFGERASGRSGAG GVPLTPLMAKLSVLALSETTPIEIQTPLTTSKVFPRRSSLKCEDAVDALA ALTTAPAQPPGPIQPDGLQRTELYICGQQNMTLLLLMEEGTCQQQQVVQK MFDICVAKFPHMESQLNQTLNVNVEGDNRDGSNYSFMCVDSKWDVLQRNG PWNPLELNILESMHSIHSSGHHLTDLILRSNDSVYYGHKNGRTEFFYKEP THQINGIPPPSDPIGNIQSRAKSRLERDHSYMLF*