Clone FI02017 Report

Search the DGRC for FI02017

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:20
Well:17
Vector:pFlc-1
Associated Gene/TranscriptCASK-RB
Protein status:FI02017.pep: gold
Sequenced Size:3982

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Caki 2008-12-18 5.12 accounting

Clone Sequence Records

FI02017.complete Sequence

3982 bp assembled on 2008-10-14

GenBank Submission: BT046172.1

> FI02017.complete
AGTTCTTCGCCAATCAATTCCTCACGGGCCGTGTTTGTTTTAAGTTAAAA
TTAGTAAATTACCCAATGCAATCAGCTTGCCAGGCGATTCGTGCTGCGCA
CCTAGACAATCGAGTGCTAATGCGATTCGCTAAAATGCCAAAAACCAGCG
GCCGTTGAAGAATCGCTGCCAAATCGCGCAAAATGCATTCTTAACATCAG
CAGCTACGAAAACAGCAACAGCATTAGCGGCAACAACGAATCAACGACAC
CAATAACAATACCATTAACAACAAATCATCAGAAGAAACCGAAGGAAAAC
GCTCAAAGTTTTGGAGTTGCTCACTGGCCGCTTAGTTTTTTGTTTATTTT
TTATGTTCGTTTTTGGAGGGCAGTAGGCGACGACGGGCAAAGGAAGCGGG
AGAAGGAAAAGCGACGGACACGAAAAACAGAACACAACTCATCAATATTC
GAAAAAGCAATTGAGTCGAGGCATCAATTCATCAATTATTCAAAATGACC
GAAGACGAAATTCTCTTTGACGACGTCTACGAGCTGTGCGAGGTCATTGG
CAAAGGACCTTTCTCCATCGTAAGGCGATGCATACACAGGGAGTCCAATC
AGCAGTTTGCCGTCAAAATCGTTGATGTGGCCAAGTTCACAGCGAGTCCT
GGACTGAGCACAGCGGATCTGAAGCGCGAGGCCACAATATGTCACATGTT
AAAGCATCCGCACATTGTAGAGCTGCTGGAGACGTACAGTTCCGAGGGAA
TGCTCTACATGGTCTTCGAGTTCATGGAGGGCTCCGACTTGTGCTTCGAG
GTTGTGCGGCGTGCTGTTGCCGGTTTTGTCTACAGCGAGGCGGTTGCTTG
TCACTATATGCGACAAATCCTGGAGGCACTGCGCTATTGTCACGAGAACG
ACATCCTGCACAGGGATGTTCGTCCCGCCTGCGCTCTCCTCGCCACCGTC
GACAACTCGGCGCCGGTGAAACTTGGCGGCTTCGGATCGGCCATTCAGTT
GCCCGGCACCCGGGAAACCATAGAAACACACGGACGGGTAGGATGTCCGC
ATTATATGGCGCCAGAGGTGGTGACCAGGCGGCTTTACGGCAAAGGCTGC
GATGTGTGGGGTGCCGGAGTGATGCTGCACGTCCTGCTCTCGGGCAGATT
GCCCTTCCTGGGATCCGGAGTGAGGTTGCAGCAGTCAGTAGCTCGCGGTC
GGTTATCGTTTGAAGCACCGGAGTGGAAATCAATCTCGGCGAACGCCAAG
GACTTAGTCATGAAAATGCTGGCCGCCAATCCACATCACAGACTCTCCAT
AACCGAGGTGCTGGATCATCCATGGATACGGGATCGGGACAAACTACAGC
GCACTCACCTAGCGGACACGGTGGAGGAATTGAAACGCTACAATGCCCGG
CGCAAGCTAAAGGGTGCTGTTCAGGCCATCGCAGGAGGCACCAACATGGA
TCCACTATACGCCACCGATGCGGACATGCCCATAACCGGCGCCACGGACG
AATGGGCCGACGAGGAGGCGGGCATTGAGGCAGTGCAGCGCATCTTGGAC
TGTCTGGATGACATATATTCGCTGCAGGACGCACACGTTGACGCCGATGT
GCTGCGGGATATGCTGCGCGACAACAGGCTGCACCAGTTTCTGCAGCTGT
TCGACAGGATCGCGGCGACAGTGGTGACCAGCAATGGTAGAGCACCGGCT
GCCGAGGCCGTAGGCCGATGTCGCGATGTCCTGGAGCAGCTCTCATCGAC
GTCCGGCGGCAACTCACTGGGCGGCAAGTATGCCAAGGAGGAGCTGATGC
GGCTACTGGCCGCCCCCCACATGCAGGCTCTGCTCCATAGCCACGATGTG
GTGGCCCGGGATGTCTACGGGGAGGAGGCGCTGCGCGTCACCCCGCCCCC
GATGGTGCCCTACCTCAATGGCGACGAGCTGGACAACGTCGAGGGCGGCG
AACTGCAGCATGTGACCCGGGTGCGACTGGTGCAGTTTCAGAAGAACACG
GACGAGCCCATGGGCATCACGCTGAAGATGACCGAGGACGGGCGGTGCAT
TGTGGCCAGGATTATGCACGGCGGGATGATTCATCGCCAGGCCACGCTGC
ACGTGGGCGACGAGATACGGGAGATCAACGGCCAGCCGGTGCAGCACCAG
TCGGTTGGCCAATTGCAACGAATGCTGCGCGAGGCACGCGGTTCTGTTAC
CTTCAAGATAGTTCCTTCGTACCGCAGCGCTCCGCCCCCCTGCGAGATAT
TCGTGCGCGCCCAATTCGATTATAATCCGCTGGATGATGAGCTTATACCC
TGCGCCCAGGCGGGCATATCGTTCCAAGTGGGCGATATACTGCAGATTAT
TAGCAAGGACGATCATCACTGGTGGCAGGCGCGACTGGACACGGTGGGCG
GATCGGCCGGACTGATACCGTCGCCGGAGCTGCAGGAGTGGCGGATCGCC
TGCCAGACGGTCGACAAGACCAAGCAGGAGCAGGTTAACTGCTCCATCTT
CGGGCGCAAGAAGAAGCAATGCCGGGACAAATATCTGGCCAAGCACAATG
CCATCTTCGACACGCTCGATGTGGTCACGTACGAGGAGGTTGTCAAGGTG
CCAGTTGGCGACCCGAACTTTCAGCGCAAAACGTTGGTGCTCTTGGGTGC
TCATGGGGTGGGCAGGCGGCACATTAAGAACACCTTGATATCGAAGTACC
CCGACAAGTACGCCTATCCCATACCACATACAACGAGACCTGCCAAACCC
GAGGAGGAGAACGGACGCAGCTATTACTTTGTCTCGCACGATGAAATGAT
GGCGGACATCGGTGCGAATGAGTACTTGGAATACGGCACCCACGAGGATG
CCATGTACGGCACCAAGTTGGACACCATCCGACGGATTCACACCGAGGGC
AAGATGGCCATATTGGATGTGGAGCCGCAGGCACTAAAAATACTCCGCAC
CGCCGAGTTCACGCCCTATGTCGTGTTTATAGCGGCGCCCTCACTGCAGA
ACATAGCAGATTACGACGGCAGCCTGGAGCGACTGGCCAAGGAGTCGGAG
ATGCTGCGCCAGCTATACGGTCACTTCTTCGATCTGACGATTGTGAACAA
CGATATTAGCGAGACGATTGCCACGCTGGAGACGGCCATCGACCGGGTGC
ATACCACCCCGCAGTGGGTGCCCGTATCCTGGCTGTACTGACAAGACAGC
GAACTGGAATGCCCCGACTGCCTCGAGGGCTGTGAATGCGAGTGGGAAGC
CTACACACAGGCCTCCAACGTAGCCCTATACTGAGGCACAGATGCAGATG
CGCACGACGATGCAGATACACGCCACATCACCACACCACACACACCATTA
AAGTATTACCAAGGCACAAGCAACAGCAACTGAAGAAGCAACACAGCAAC
CACTACGAGAGATGACAGTCAGGACTGGAGGATAGAAGGCGCCTGGCGCC
GAGCTATATAATTTAAGAATAAATGGGTATTATGGGAACTGCGGTCGCAA
CGCAATGACAAAAGTGTGTGTTAAACGACAAACAACCATTTGTATTTGCC
TCTTATTTGTTTTCTGTTTTAACAGTATGTTTATTTTGTATTAATTTTAA
TCGATTGTATTTGCCATTCCATGCTCAATGTGTTATATTTTACGATTATT
GTTTTGTTGTATTTGTTTTATTCAGCATTTAGTCAAAACAGCATTAAACG
CTTATGTAAATCTTGCACTTGTTAGTGTCTAAGTTAAATGGAGTTAGACA
AATCGAAACTGAAGCACTCCAAATTGTTTTTACCTAATGATTATTTCCGG
TAAGAGTCTTGTGTGCAGGTAGGGCGTCGAACGAGTTAGTAAATTATAGA
AAAACTACGTAATTAAATATAATTAAACATAGACACAAGGAGACACAACA
GCAAAAAGAACACGAAGAACAGAAAAAATAAACAAATTACGATGTGAGCA
AATAAAAAAAAAAAATAAAAAAAAAAAAAAAA

FI02017.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:10:32
Subject Length Description Subject Range Query Range Score Percent Strand
Caki.o 6540 Caki.o 22..2505 1..2484 12405 99.9 Plus
Caki.k 6391 Caki.k 22..2505 1..2484 12405 99.9 Plus
Caki-RF 4269 Caki-RF 22..2505 1..2484 12405 99.9 Plus
Caki.o 6540 Caki.o 2559..4026 2484..3951 7340 100 Plus
Caki.k 6391 Caki.k 2559..4026 2484..3951 7340 100 Plus
Caki-RF 4269 Caki-RF 2559..4026 2484..3951 7340 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:35:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 17609673..17610612 3951..3012 4580 99.1 Minus
chr3R 27901430 chr3R 17644390..17644768 553..176 1815 99.2 Minus
chr3R 27901430 chr3R 17641893..17642251 1208..850 1780 99.7 Minus
chr3R 27901430 chr3R 17640841..17641191 1827..1477 1755 100 Minus
chr3R 27901430 chr3R 17641559..17641827 1476..1208 1330 99.6 Minus
chr3R 27901430 chr3R 17615709..17615900 2013..1822 960 100 Minus
chr3R 27901430 chr3R 17646227..17646402 176..1 880 100 Minus
chr3R 27901430 chr3R 17610680..17610856 3011..2835 870 99.4 Minus
chr3R 27901430 chr3R 17615478..17615643 2177..2012 830 100 Minus
chr3R 27901430 chr3R 17613199..17613342 2484..2341 720 100 Minus
chr3R 27901430 chr3R 17611536..17611661 2727..2602 630 100 Minus
chr3R 27901430 chr3R 17611729..17611853 2608..2484 610 99.2 Minus
chr3R 27901430 chr3R 17643396..17643508 666..554 565 100 Minus
chr3R 27901430 chr3R 17610922..17611030 2836..2728 545 100 Minus
chr3R 27901430 chr3R 17642759..17642865 772..666 535 100 Minus
chr3R 27901430 chr3R 17613412..17613512 2345..2245 505 100 Minus
chr3R 27901430 chr3R 17642613..17642690 850..773 390 100 Minus
chr3R 27901430 chr3R 17615280..17615353 2246..2173 355 98.6 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:07:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:35:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21785923..21786862 3951..3012 4700 100 Minus
3R 32079331 3R 21820647..21821024 553..176 1875 99.7 Minus
3R 32079331 3R 21818152..21818510 1208..850 1795 100 Minus
3R 32079331 3R 21817100..21817450 1827..1477 1755 100 Minus
3R 32079331 3R 21817818..21818086 1476..1208 1345 100 Minus
3R 32079331 3R 21791960..21792151 2013..1822 960 100 Minus
3R 32079331 3R 21786930..21787106 3011..2835 885 100 Minus
3R 32079331 3R 21822483..21822658 176..1 880 100 Minus
3R 32079331 3R 21791729..21791894 2177..2012 830 100 Minus
3R 32079331 3R 21789449..21789592 2484..2341 720 100 Minus
3R 32079331 3R 21787786..21787911 2727..2602 630 100 Minus
3R 32079331 3R 21787979..21788103 2608..2484 610 99.2 Minus
3R 32079331 3R 21819654..21819766 666..554 565 100 Minus
3R 32079331 3R 21787172..21787280 2836..2728 545 100 Minus
3R 32079331 3R 21819018..21819124 772..666 535 100 Minus
3R 32079331 3R 21789662..21789762 2345..2245 505 100 Minus
3R 32079331 3R 21818872..21818949 850..773 390 100 Minus
3R 32079331 3R 21791531..21791604 2246..2173 355 98.6 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:28:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 21526754..21527693 3951..3012 4700 100 Minus
3R 31820162 3R 21561478..21561855 553..176 1875 99.7 Minus
3R 31820162 3R 21558983..21559341 1208..850 1795 100 Minus
3R 31820162 3R 21557931..21558281 1827..1477 1755 100 Minus
3R 31820162 3R 21558649..21558917 1476..1208 1345 100 Minus
3R 31820162 3R 21532791..21532982 2013..1822 960 100 Minus
3R 31820162 3R 21527761..21527937 3011..2835 885 100 Minus
3R 31820162 3R 21563314..21563489 176..1 880 100 Minus
3R 31820162 3R 21532560..21532725 2177..2012 830 100 Minus
3R 31820162 3R 21530280..21530423 2484..2341 720 100 Minus
3R 31820162 3R 21528617..21528742 2727..2602 630 100 Minus
3R 31820162 3R 21528810..21528934 2608..2484 610 99.2 Minus
3R 31820162 3R 21560485..21560597 666..554 565 100 Minus
3R 31820162 3R 21528003..21528111 2836..2728 545 100 Minus
3R 31820162 3R 21559849..21559955 772..666 535 100 Minus
3R 31820162 3R 21530493..21530593 2345..2245 505 100 Minus
3R 31820162 3R 21559703..21559780 850..773 390 100 Minus
3R 31820162 3R 21532362..21532435 2246..2173 355 98.6 Minus
Blast to na_te.dros performed 2019-03-16 01:35:49
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1077..1162 193..282 179 71.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6795..6885 193..284 178 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6719..6834 192..305 178 63.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6762..6860 193..289 174 66.7 Plus
roo 9092 roo DM_ROO 9092bp 1109..1178 192..261 169 74.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2350..2445 193..289 167 66.3 Plus
TART-A 13424 TART-A 13424bp 7854..7999 3817..3966 163 60.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6783..6885 193..293 158 64.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2297..2416 182..296 156 61.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6741..6839 193..289 156 64.6 Plus
gypsy10 6006 gypsy10 GYPSY10 6006bp 662..847 3769..3577 156 56.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2449..2530 193..273 155 67.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2599..2677 211..293 144 67.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2910..2987 195..274 143 66.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2763..2870 192..291 134 63 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3250..3398 161..303 128 59.2 Plus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 2618..2684 232..297 125 67.2 Plus
Stalker2 7672 Stalker2 STALKER2 7672bp 2024..2123 3659..3560 122 62.1 Minus

FI02017.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:36:43 Download gff for FI02017.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 17615478..17615642 2013..2177 100 <- Minus
chr3R 17615710..17615895 1827..2012 100 <- Minus
chr3R 17613412..17613510 2247..2345 100 <- Minus
chr3R 17615280..17615348 2178..2246 100 <- Minus
chr3R 17609671..17610612 3012..3953 99 <- Minus
chr3R 17610680..17610855 2836..3011 99 <- Minus
chr3R 17610923..17611030 2728..2835 100 <- Minus
chr3R 17611536..17611658 2605..2727 100 <- Minus
chr3R 17611733..17611852 2485..2604 100 <- Minus
chr3R 17613199..17613337 2346..2484 100 <- Minus
chr3R 17640842..17641191 1477..1826 100 <- Minus
chr3R 17641559..17641826 1209..1476 99 <- Minus
chr3R 17641893..17642250 851..1208 99 <- Minus
chr3R 17642613..17642690 773..850 100 <- Minus
chr3R 17642759..17642864 667..772 100 <- Minus
chr3R 17643396..17643508 554..666 100 <- Minus
chr3R 17644390..17644767 177..553 99 <- Minus
chr3R 17646227..17646402 1..176 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:37:16 Download gff for FI02017.complete
Subject Subject Range Query Range Percent Splice Strand
Caki-RB 1..2697 495..3191 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:15:25 Download gff for FI02017.complete
Subject Subject Range Query Range Percent Splice Strand
CASK-RB 1..2697 495..3191 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:41:11 Download gff for FI02017.complete
Subject Subject Range Query Range Percent Splice Strand
CASK-RH 1..2790 495..3284 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:37:14 Download gff for FI02017.complete
Subject Subject Range Query Range Percent Splice Strand
CASK-RH 1..2790 495..3284 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:37:15 Download gff for FI02017.complete
Subject Subject Range Query Range Percent Splice Strand
Caki-RB 1..3936 17..3953 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:15:25 Download gff for FI02017.complete
Subject Subject Range Query Range Percent Splice Strand
CASK-RB 1..3936 17..3953 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:41:11 Download gff for FI02017.complete
Subject Subject Range Query Range Percent Splice Strand
CASK-RB 17..3968 1..3953 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-14 11:21:43 Download gff for FI02017.complete
Subject Subject Range Query Range Percent Splice Strand
Caki-RB 1..3936 17..3953 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:37:14 Download gff for FI02017.complete
Subject Subject Range Query Range Percent Splice Strand
CASK-RB 17..3968 1..3953 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:36:43 Download gff for FI02017.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21817818..21818085 1209..1476 100 <- Minus
3R 21785921..21786862 3012..3953 99 <- Minus
3R 21786930..21787105 2836..3011 100 <- Minus
3R 21787173..21787280 2728..2835 100 <- Minus
3R 21787786..21787908 2605..2727 100 <- Minus
3R 21787983..21788102 2485..2604 100 <- Minus
3R 21789449..21789587 2346..2484 100 <- Minus
3R 21789662..21789760 2247..2345 100 <- Minus
3R 21791531..21791599 2178..2246 100 <- Minus
3R 21791729..21791893 2013..2177 100 <- Minus
3R 21791961..21792146 1827..2012 100 <- Minus
3R 21817101..21817450 1477..1826 100 <- Minus
3R 21818152..21818509 851..1208 100 <- Minus
3R 21818872..21818949 773..850 100 <- Minus
3R 21819018..21819123 667..772 100 <- Minus
3R 21819654..21819766 554..666 100 <- Minus
3R 21820647..21821023 177..553 99 <- Minus
3R 21822483..21822658 1..176 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:36:43 Download gff for FI02017.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21817818..21818085 1209..1476 100 <- Minus
3R 21785921..21786862 3012..3953 99 <- Minus
3R 21786930..21787105 2836..3011 100 <- Minus
3R 21787173..21787280 2728..2835 100 <- Minus
3R 21787786..21787908 2605..2727 100 <- Minus
3R 21787983..21788102 2485..2604 100 <- Minus
3R 21789449..21789587 2346..2484 100 <- Minus
3R 21789662..21789760 2247..2345 100 <- Minus
3R 21791531..21791599 2178..2246 100 <- Minus
3R 21791729..21791893 2013..2177 100 <- Minus
3R 21791961..21792146 1827..2012 100 <- Minus
3R 21817101..21817450 1477..1826 100 <- Minus
3R 21818152..21818509 851..1208 100 <- Minus
3R 21818872..21818949 773..850 100 <- Minus
3R 21819018..21819123 667..772 100 <- Minus
3R 21819654..21819766 554..666 100 <- Minus
3R 21820647..21821023 177..553 99 <- Minus
3R 21822483..21822658 1..176 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:36:43 Download gff for FI02017.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21817818..21818085 1209..1476 100 <- Minus
3R 21785921..21786862 3012..3953 99 <- Minus
3R 21786930..21787105 2836..3011 100 <- Minus
3R 21787173..21787280 2728..2835 100 <- Minus
3R 21787786..21787908 2605..2727 100 <- Minus
3R 21787983..21788102 2485..2604 100 <- Minus
3R 21789449..21789587 2346..2484 100 <- Minus
3R 21789662..21789760 2247..2345 100 <- Minus
3R 21791531..21791599 2178..2246 100 <- Minus
3R 21791729..21791893 2013..2177 100 <- Minus
3R 21791961..21792146 1827..2012 100 <- Minus
3R 21817101..21817450 1477..1826 100 <- Minus
3R 21818152..21818509 851..1208 100 <- Minus
3R 21818872..21818949 773..850 100 <- Minus
3R 21819018..21819123 667..772 100 <- Minus
3R 21819654..21819766 554..666 100 <- Minus
3R 21820647..21821023 177..553 99 <- Minus
3R 21822483..21822658 1..176 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:41:11 Download gff for FI02017.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17611643..17612584 3012..3953 99 <- Minus
arm_3R 17612652..17612827 2836..3011 100 <- Minus
arm_3R 17612895..17613002 2728..2835 100 <- Minus
arm_3R 17613508..17613630 2605..2727 100 <- Minus
arm_3R 17613705..17613824 2485..2604 100 <- Minus
arm_3R 17615171..17615309 2346..2484 100 <- Minus
arm_3R 17615384..17615482 2247..2345 100 <- Minus
arm_3R 17617253..17617321 2178..2246 100 <- Minus
arm_3R 17617451..17617615 2013..2177 100 <- Minus
arm_3R 17617683..17617868 1827..2012 100 <- Minus
arm_3R 17642823..17643172 1477..1826 100 <- Minus
arm_3R 17643540..17643807 1209..1476 100 <- Minus
arm_3R 17643874..17644231 851..1208 100 <- Minus
arm_3R 17644594..17644671 773..850 100 <- Minus
arm_3R 17644740..17644845 667..772 100 <- Minus
arm_3R 17645376..17645488 554..666 100 <- Minus
arm_3R 17646369..17646745 177..553 99 <- Minus
arm_3R 17648205..17648380 1..176 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:46:15 Download gff for FI02017.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21527761..21527936 2836..3011 100 <- Minus
3R 21528004..21528111 2728..2835 100 <- Minus
3R 21528617..21528739 2605..2727 100 <- Minus
3R 21528814..21528933 2485..2604 100 <- Minus
3R 21530280..21530418 2346..2484 100 <- Minus
3R 21530493..21530591 2247..2345 100 <- Minus
3R 21532362..21532430 2178..2246 100 <- Minus
3R 21532560..21532724 2013..2177 100 <- Minus
3R 21532792..21532977 1827..2012 100 <- Minus
3R 21526752..21527693 3012..3953 99 <- Minus
3R 21557932..21558281 1477..1826 100 <- Minus
3R 21558649..21558916 1209..1476 100 <- Minus
3R 21558983..21559340 851..1208 100 <- Minus
3R 21559703..21559780 773..850 100 <- Minus
3R 21559849..21559954 667..772 100 <- Minus
3R 21560485..21560597 554..666 100 <- Minus
3R 21561478..21561854 177..553 99 <- Minus
3R 21563314..21563489 1..176 100   Minus

FI02017.pep Sequence

Translation from 494 to 3190

> FI02017.pep
MTEDEILFDDVYELCEVIGKGPFSIVRRCIHRESNQQFAVKIVDVAKFTA
SPGLSTADLKREATICHMLKHPHIVELLETYSSEGMLYMVFEFMEGSDLC
FEVVRRAVAGFVYSEAVACHYMRQILEALRYCHENDILHRDVRPACALLA
TVDNSAPVKLGGFGSAIQLPGTRETIETHGRVGCPHYMAPEVVTRRLYGK
GCDVWGAGVMLHVLLSGRLPFLGSGVRLQQSVARGRLSFEAPEWKSISAN
AKDLVMKMLAANPHHRLSITEVLDHPWIRDRDKLQRTHLADTVEELKRYN
ARRKLKGAVQAIAGGTNMDPLYATDADMPITGATDEWADEEAGIEAVQRI
LDCLDDIYSLQDAHVDADVLRDMLRDNRLHQFLQLFDRIAATVVTSNGRA
PAAEAVGRCRDVLEQLSSTSGGNSLGGKYAKEELMRLLAAPHMQALLHSH
DVVARDVYGEEALRVTPPPMVPYLNGDELDNVEGGELQHVTRVRLVQFQK
NTDEPMGITLKMTEDGRCIVARIMHGGMIHRQATLHVGDEIREINGQPVQ
HQSVGQLQRMLREARGSVTFKIVPSYRSAPPPCEIFVRAQFDYNPLDDEL
IPCAQAGISFQVGDILQIISKDDHHWWQARLDTVGGSAGLIPSPELQEWR
IACQTVDKTKQEQVNCSIFGRKKKQCRDKYLAKHNAIFDTLDVVTYEEVV
KVPVGDPNFQRKTLVLLGAHGVGRRHIKNTLISKYPDKYAYPIPHTTRPA
KPEEENGRSYYFVSHDEMMADIGANEYLEYGTHEDAMYGTKLDTIRRIHT
EGKMAILDVEPQALKILRTAEFTPYVVFIAAPSLQNIADYDGSLERLAKE
SEMLRQLYGHFFDLTIVNNDISETIATLETAIDRVHTTPQWVPVSWLY*

FI02017.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:16:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16967-PA 1169 GF16967-PA 705..1169 444..898 2447 97.4 Plus
Dana\GF16967-PA 1169 GF16967-PA 1..444 1..444 2310 97.1 Plus
Dana\GF14547-PA 636 GF14547-PA 91..636 409..898 749 33.3 Plus
Dana\GF12435-PA 556 GF12435-PA 15..555 346..897 718 32 Plus
Dana\GF22825-PA 531 GF22825-PA 10..304 8..309 621 40.8 Plus
Dana\GF20363-PA 907 GF20363-PA 430..901 493..898 532 29.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:16:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12557-PA 451 GG12557-PA 1..449 1..449 2366 98.4 Plus
Dere\GG22470-PA 315 GG22470-PA 2..315 585..898 1708 100 Plus
Dere\GG21549-PA 636 GG21549-PA 91..636 409..898 756 33.1 Plus
Dere\GG22696-PA 595 GG22696-PA 15..594 346..897 712 31.5 Plus
Dere\GG12561-PA 161 GG12561-PA 6..123 444..561 620 99.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:16:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18714-PA 596 GH18714-PA 132..596 444..898 2375 94 Plus
Dgri\GH18713-PA 445 GH18713-PA 1..443 1..445 2247 93.7 Plus
Dgri\GH10158-PA 636 GH10158-PA 89..636 409..898 743 33.3 Plus
Dgri\GH23972-PA 530 GH23972-PA 10..304 8..309 620 40.8 Plus
Dgri\GH24103-PA 997 GH24103-PA 532..991 493..898 581 30.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:30
Subject Length Description Subject Range Query Range Score Percent Strand
CASK-PH 929 CG6703-PH 1..898 1..898 4710 100 Plus
CASK-PB 898 CG6703-PB 1..898 1..898 4710 100 Plus
CASK-PF 916 CG6703-PF 1..916 1..898 4681 98 Plus
CASK-PD 591 CG6703-PD 127..591 444..898 2385 97.8 Plus
CASK-PA 591 CG6703-PA 127..591 444..898 2385 97.8 Plus
CASK-PE 469 CG6703-PE 6..469 445..898 2380 97.8 Plus
CASK-PG 609 CG6703-PG 127..609 444..898 2356 94.2 Plus
vari-PE 611 CG9326-PE 91..611 409..898 758 34.3 Plus
vari-PD 615 CG9326-PD 91..615 409..898 757 34.2 Plus
metro-PD 546 CG30021-PD 15..545 346..897 734 32.6 Plus
vari-PB 636 CG9326-PB 91..636 409..898 733 32.7 Plus
metro-PC 585 CG30021-PC 15..584 346..897 724 31.9 Plus
metro-PB 556 CG30021-PB 15..555 346..897 715 31.9 Plus
metro-PA 595 CG30021-PA 15..594 346..897 705 31.3 Plus
vari-PF 469 CG9326-PF 3..469 490..898 703 34.7 Plus
vari-PC 469 CG9326-PC 3..469 490..898 703 34.7 Plus
CaMKII-PK 482 CG18069-PK 10..304 8..309 606 40.8 Plus
CaMKII-PH 490 CG18069-PH 10..304 8..309 606 40.8 Plus
CaMKII-PC 490 CG18069-PC 10..304 8..309 606 40.8 Plus
CaMKII-PA 490 CG18069-PA 10..304 8..309 606 40.8 Plus
CaMKII-PM 504 CG18069-PM 10..304 8..309 606 40.8 Plus
CaMKII-PB 509 CG18069-PB 10..304 8..309 606 40.8 Plus
CaMKII-PE 509 CG18069-PE 10..304 8..309 606 40.8 Plus
CaMKII-PG 516 CG18069-PG 10..304 8..309 606 40.8 Plus
CaMKII-PL 522 CG18069-PL 10..304 8..309 606 40.8 Plus
CaMKII-PI 530 CG18069-PI 10..304 8..309 606 40.8 Plus
CaMKII-PD 530 CG18069-PD 10..304 8..309 606 40.8 Plus
CaMKII-PJ 531 CG18069-PJ 10..304 8..309 606 40.8 Plus
sdt-PF 859 CG32717-PF 401..853 493..898 603 31.7 Plus
sdt-PK 879 CG32717-PK 421..873 493..898 603 31.7 Plus
sdt-PD 879 CG32717-PD 421..873 493..898 603 31.7 Plus
sdt-PH 934 CG32717-PH 476..928 493..898 603 31.7 Plus
sdt-PP 1173 CG32717-PP 715..1167 493..898 603 31.7 Plus
sdt-PI 1269 CG32717-PI 811..1263 493..898 603 31.7 Plus
sdt-PN 1292 CG32717-PN 834..1286 493..898 603 31.7 Plus
sdt-PB 1292 CG32717-PB 834..1286 493..898 603 31.7 Plus
sdt-PE 1367 CG32717-PE 909..1361 493..898 603 31.7 Plus
sdt-PO 1606 CG32717-PO 1148..1600 493..898 603 31.7 Plus
sdt-PM 1901 CG32717-PM 1443..1895 493..898 603 31.7 Plus
sdt-PG 2020 CG32717-PG 1562..2014 493..898 603 31.7 Plus
sdt-PJ 1527 CG32717-PJ 1050..1521 493..898 568 30.5 Plus
sdt-PL 1941 CG32717-PL 1464..1935 493..898 568 30.5 Plus
CaMKI-PI 390 CG1495-PI 24..320 5..311 414 31.9 Plus
CaMKI-PA 405 CG1495-PA 24..335 5..311 393 30.8 Plus
CaMKI-PG 405 CG1495-PG 24..335 5..311 393 30.8 Plus
CaMKI-PB 405 CG1495-PB 24..335 5..311 393 30.8 Plus
lok-PC 459 CG10895-PC 157..432 12..286 392 35.1 Plus
lok-PB 459 CG10895-PB 157..432 12..286 392 35.1 Plus
lok-PA 476 CG10895-PA 174..449 12..286 392 35.1 Plus
PhKgamma-PF 391 CG1830-PF 23..314 12..312 386 32.6 Plus
PhKgamma-PH 419 CG1830-PH 23..342 12..312 379 32 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:16:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22862-PA 594 GI22862-PA 130..594 444..898 2427 96.6 Plus
Dmoj\GI22861-PA 471 GI22861-PA 1..442 1..444 2255 94.6 Plus
Dmoj\GI22442-PA 634 GI22442-PA 89..634 409..898 767 33.6 Plus
Dmoj\GI19661-PA 556 GI19661-PA 15..555 346..897 735 33.3 Plus
Dmoj\GI14101-PA 531 GI14101-PA 10..304 8..309 621 40.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:16:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23741-PA 487 GL23741-PA 5..487 414..898 2417 90.9 Plus
Dper\GL23739-PA 426 GL23739-PA 1..410 1..410 2123 96.3 Plus
Dper\GL19590-PA 637 GL19590-PA 92..637 409..898 753 33.3 Plus
Dper\GL20641-PA 596 GL20641-PA 15..595 346..897 702 31.6 Plus
Dper\GL18383-PA 530 GL18383-PA 10..304 8..309 623 40.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:16:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19796-PA 1027 GA19796-PA 573..1027 444..898 2442 97.8 Plus
Dpse\GA19796-PA 1027 GA19796-PA 1..447 1..448 2248 94 Plus
Dpse\GA21703-PA 637 GA21703-PA 92..637 409..898 755 33.3 Plus
Dpse\GA15582-PB 586 GA15582-PB 15..585 346..897 723 32.1 Plus
Dpse\GA15582-PA 596 GA15582-PA 15..595 346..897 703 31.6 Plus
Dpse\GA17100-PA 1002 GA17100-PA 538..996 493..898 575 30 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:16:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23693-PA 591 GM23693-PA 127..591 444..898 2450 97.8 Plus
Dsec\GM23691-PA 526 GM23691-PA 1..448 1..448 2356 98.2 Plus
Dsec\GM23306-PA 636 GM23306-PA 91..636 409..898 755 33.3 Plus
Dsec\GM20471-PA 593 GM20471-PA 13..592 346..897 713 31.5 Plus
Dsec\GM13012-PA 530 GM13012-PA 10..304 8..309 622 40.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:16:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18503-PA 769 GD18503-PA 305..769 444..898 2443 97.6 Plus
Dsim\GD18502-PA 448 GD18502-PA 1..446 1..446 2353 98.4 Plus
Dsim\GD21680-PA 644 GD21680-PA 99..644 409..898 753 33.3 Plus
Dsim\GD25940-PA 377 GD25940-PA 1..376 524..897 646 35.4 Plus
Dsim\GD17041-PA 593 GD17041-PA 42..303 19..278 371 33.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14160-PA 1039 GJ14160-PA 575..1039 444..898 2431 96.3 Plus
Dvir\GJ14160-PA 1039 GJ14160-PA 1..446 1..448 2234 93.1 Plus
Dvir\GJ20335-PA 634 GJ20335-PA 89..634 409..898 752 33.1 Plus
Dvir\GJ15026-PA 595 GJ15026-PA 15..594 346..897 713 32.4 Plus
Dvir\GJ20463-PA 530 GJ20463-PA 10..304 8..309 620 40.8 Plus
Dvir\GJ19412-PA 1381 GJ19412-PA 923..1375 493..898 568 30.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:16:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13019-PA 608 GK13019-PA 141..608 444..898 2423 96.4 Plus
Dwil\GK13017-PA 498 GK13017-PA 1..445 1..446 2233 93.5 Plus
Dwil\GK24864-PA 641 GK24864-PA 91..641 409..898 738 32.6 Plus
Dwil\GK20656-PA 599 GK20656-PA 15..598 346..897 725 31.9 Plus
Dwil\GK13605-PA 530 GK13605-PA 10..304 8..309 621 40.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:16:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24086-PA 594 GE24086-PA 130..594 444..898 2452 97.8 Plus
Dyak\GE24085-PA 503 GE24085-PA 1..448 1..448 2360 98.2 Plus
Dyak\GE13543-PA 636 GE13543-PA 91..636 409..898 749 32.9 Plus
Dyak\GE14490-PA 451 GE14490-PA 10..304 8..309 622 40.8 Plus
Dyak\GE13049-PA 315 GE13049-PA 3..314 587..897 535 35.6 Plus

FI02017.hyp Sequence

Translation from 494 to 3190

> FI02017.hyp
MTEDEILFDDVYELCEVIGKGPFSIVRRCIHRESNQQFAVKIVDVAKFTA
SPGLSTADLKREATICHMLKHPHIVELLETYSSEGMLYMVFEFMEGSDLC
FEVVRRAVAGFVYSEAVACHYMRQILEALRYCHENDILHRDVRPACALLA
TVDNSAPVKLGGFGSAIQLPGTRETIETHGRVGCPHYMAPEVVTRRLYGK
GCDVWGAGVMLHVLLSGRLPFLGSGVRLQQSVARGRLSFEAPEWKSISAN
AKDLVMKMLAANPHHRLSITEVLDHPWIRDRDKLQRTHLADTVEELKRYN
ARRKLKGAVQAIAGGTNMDPLYATDADMPITGATDEWADEEAGIEAVQRI
LDCLDDIYSLQDAHVDADVLRDMLRDNRLHQFLQLFDRIAATVVTSNGRA
PAAEAVGRCRDVLEQLSSTSGGNSLGGKYAKEELMRLLAAPHMQALLHSH
DVVARDVYGEEALRVTPPPMVPYLNGDELDNVEGGELQHVTRVRLVQFQK
NTDEPMGITLKMTEDGRCIVARIMHGGMIHRQATLHVGDEIREINGQPVQ
HQSVGQLQRMLREARGSVTFKIVPSYRSAPPPCEIFVRAQFDYNPLDDEL
IPCAQAGISFQVGDILQIISKDDHHWWQARLDTVGGSAGLIPSPELQEWR
IACQTVDKTKQEQVNCSIFGRKKKQCRDKYLAKHNAIFDTLDVVTYEEVV
KVPVGDPNFQRKTLVLLGAHGVGRRHIKNTLISKYPDKYAYPIPHTTRPA
KPEEENGRSYYFVSHDEMMADIGANEYLEYGTHEDAMYGTKLDTIRRIHT
EGKMAILDVEPQALKILRTAEFTPYVVFIAAPSLQNIADYDGSLERLAKE
SEMLRQLYGHFFDLTIVNNDISETIATLETAIDRVHTTPQWVPVSWLY*

FI02017.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:16:27
Subject Length Description Subject Range Query Range Score Percent Strand
CASK-PH 929 CG6703-PH 1..898 1..898 4710 100 Plus
CASK-PB 898 CG6703-PB 1..898 1..898 4710 100 Plus
CASK-PF 916 CG6703-PF 1..916 1..898 4681 98 Plus
CASK-PD 591 CG6703-PD 127..591 444..898 2385 97.8 Plus
CASK-PA 591 CG6703-PA 127..591 444..898 2385 97.8 Plus