Clone FI02018 Report

Search the DGRC for FI02018

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:20
Well:18
Vector:pFlc-1
Associated Gene/TranscriptCG6812-RA
Protein status:FI02018.pep: gold
Sequenced Size:2079

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6812 2008-08-15 Release 5.9 accounting
CG6812 2008-12-18 5.12 accounting

Clone Sequence Records

FI02018.complete Sequence

2079 bp assembled on 2008-07-31

GenBank Submission: BT044086.1

> FI02018.complete
AAAAGCCACCCCCACCCCGCCACATTGCTTCTTCTTCCTTACCATCGCAG
TAAACAATTTGAAAATTGCATTTATACGCGACTGAGTTTGCGAATCATTC
GGCAAATTGCACAACAAAAGAAGTGCTAAATTGAGAGGTTGCGGCGAGCA
CAGCAAGTACTTGTGGATGCACAAACTCAGAGCGAAAAAAGACAAACAGA
GAGCGGCAAACAAAACAACTTTTTTTCCAATTGGAAGAGTGCCAAAAAAA
AACGGAGAGCGACATAAAAAGTGAACATTTGAACCGCATTACGAGGCAGA
AAAGTGAATTGAACAGCTGGCGGATCAGGTGCGTGGCTAAAACGAATCAT
TTGCTGTTAAATCGGCCCTAAGCAAACACATAAGGTGAGAATCTGCCCAA
AAGCGCAAGCGGCCAAAACAACAACAATAACAAAAGCAAGCCGCCATAAA
CCGGCAACAGCTGAAAGTTACTGCTTACGTAAGCCGCTCGCAATTACAAA
TTACAAGCAGTTAGGCAATTGGATCAGCAGCCAAAATGTCGCAGGTATCA
ACCCTCATCGATGTGGACAAGCCACTCTTCGATCTCAGCACCTTCGCTGG
GCGCTTCCAGTACTTCGCCTGGATGACGGACCCCCGCACCGTAGTCGTAT
CCAGCGATCGCCTGCTGGAAGCCAAAGCAATGGTTGAACGCTACCGGAAA
GGTGACCAATCCCCGCCGCTGAAGCCGGAGGAGGTGCACTACAACATGAA
GCTGTACAACTCAGCCTTTCATCCGGATACCGGCGAGCTGCAGAACTTTT
GCGGCCGCATGAGTTTTCAGGTACCCGGAGGCATGTTGATCACCGGTGGC
ATGCTGGCCTTCTATCGCACCGTGCCCGCCGTGGTGCTCTGGCAGTTCAT
CAACCAGTCCTTCAATGCGGTTGTTAACTACACGAATCGCAATGCCAACT
CGCCAACTAGCGTTACGCAGCTGGGCGTGGCCTATGTATCCGCCACGACA
TCGGCTCTGGTAGCTGCTATTGGATGCAAGAACTATTGGTCAAAGAAAGC
GACTCCGCTGTTCCAAAGATTTGTGCCCTTCGCAGCTGTGGCGGCAGCCA
ACTTCGTGAACATTCCGCTGATGCGACAAAATGAGATAATCAATGGCATA
GAGGTGAAGAACGACGATGGAGTGGTTGTGGGCCAGAGTAGATTGGCAGC
CATCAAAGGAATCGGTGAGGTGGTTGTGTCCAGGATTGCGATGGCGGCGC
CCGGAATGCTGGTGCTGCCATTGATAATGGAGAGGCTGGAGAAACTGCCT
GCCTACAGGCGCATCAAGTGGATTAATGCTCCATTCCAGACCCTTTTGGT
TGGGTGCTTCCTTTGCTTCATGGTGCCCACTGCCTGCGCCCTGTTCCCAC
AGCAGTGTTCCTTGGACACTTCGATTATGCGCACCTTCGAGCCCGAACTT
TACGAGGACCTCGAGAAGAAAACTCAGGGCAAAGTGCCCAAGCGTGTCTA
CTTCAACAAGGGTCTGTAAGATCGGCTCGACAATAATCCTGGAATTGAGG
GAAGACAATTGTGTGTTAGTGGTATCCGTTCTCGTCTCATGTTTTATGTA
GCATTTACTGTTTTAGATTGCGCAACTTTGCAGTTGCAGTTGTTCCGTGT
GTCATGTGTCAATTGTCGTAGTTGCTAAGCTAAAAGGAATCTCAGCTGTT
TTAAAATGTAAATCTCGGACCTGCTAGGTTTTTCTAATTTGTTAAATTGT
ATGATAAGTTATCATATCTAGTGACATCCACATCCAAAAAAATGTATTTG
CTCATAAGAACCTTAGCAGGGCTAGCACATAATGGGTATTAATATTCAAA
TATGTATGTCCTAAATCGTGTTCATGTTATACGTTATTTTAAAACTGTAA
TAATTGACAATTTAGATAATTTTTCATTCTGAAACTAACTAAACTGAGCT
GCTGAGCAGGAGAATGCTTTTACAAGCCACTAATAACTAACAAACCAAAC
TCGTTGTGTTTCGTATTAGAACTAATTCACTCATTGTTTAAAATAAAAGT
GTAAAAACAGTACAAAAAAAAAAAAAAAA

FI02018.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:07:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG6812.c 3542 CG6812.c 76..2135 2..2062 10265 99.9 Plus
CG6812-RA 2142 CG6812-RA 76..2135 2..2062 10265 99.9 Plus
CG6812.d 2393 CG6812.d 76..2135 2..2062 10265 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:14:46
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 19055009..19055711 1360..2062 3515 100 Plus
chr3L 24539361 chr3L 19054399..19054942 816..1359 2705 99.8 Plus
chr3L 24539361 chr3L 19052727..19053275 2..551 2685 99.6 Plus
chr3L 24539361 chr3L 19053886..19054155 552..821 1350 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:07:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:14:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19065450..19066152 1360..2062 3515 100 Plus
3L 28110227 3L 19064840..19065383 816..1359 2720 100 Plus
3L 28110227 3L 19063168..19063716 2..551 2700 99.8 Plus
3L 28110227 3L 19064327..19064596 552..821 1350 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:25:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 19058550..19059252 1360..2062 3515 100 Plus
3L 28103327 3L 19057940..19058483 816..1359 2720 100 Plus
3L 28103327 3L 19056268..19056816 2..551 2710 99.8 Plus
3L 28103327 3L 19057427..19057696 552..821 1350 100 Plus
Blast to na_te.dros performed on 2019-03-16 09:14:44 has no hits.

FI02018.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:15:56 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 19052726..19053275 1..551 99 -> Plus
chr3L 19053886..19054154 552..820 100 -> Plus
chr3L 19054404..19054942 821..1359 99 -> Plus
chr3L 19055009..19055711 1360..2063 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:39:13 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
CG6812-RA 1..984 536..1519 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:10:22 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
CG6812-RA 1..984 536..1519 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:58:45 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
CG6812-RA 1..984 536..1519 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:29 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
CG6812-RA 1..984 536..1519 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:04:24 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
CG6812-RA 1..984 536..1519 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:49:59 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
CG6812-RA 1..2053 6..2059 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:10:22 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
CG6812-RA 1..2053 6..2059 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:58:45 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
CG6812-RA 3..2062 1..2061 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-31 11:07:02 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
CG6812-RA 1..2053 6..2059 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:04:24 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
CG6812-RA 3..2062 1..2061 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:15:56 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19063167..19063716 1..551 99 -> Plus
3L 19064327..19064595 552..820 100 -> Plus
3L 19064845..19065383 821..1359 100 -> Plus
3L 19065450..19066152 1360..2063 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:15:56 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19063167..19063716 1..551 99 -> Plus
3L 19064327..19064595 552..820 100 -> Plus
3L 19064845..19065383 821..1359 100 -> Plus
3L 19065450..19066152 1360..2063 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:15:56 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19063167..19063716 1..551 99 -> Plus
3L 19064327..19064595 552..820 100 -> Plus
3L 19064845..19065383 821..1359 100 -> Plus
3L 19065450..19066152 1360..2063 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:58:45 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19056267..19056816 1..551 99 -> Plus
arm_3L 19057427..19057695 552..820 100 -> Plus
arm_3L 19057945..19058483 821..1359 100 -> Plus
arm_3L 19058550..19059252 1360..2063 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:40:23 Download gff for FI02018.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19056267..19056816 1..551 99 -> Plus
3L 19057427..19057695 552..820 100 -> Plus
3L 19057945..19058483 821..1359 100 -> Plus
3L 19058550..19059252 1360..2063 99   Plus

FI02018.pep Sequence

Translation from 535 to 1518

> FI02018.pep
MSQVSTLIDVDKPLFDLSTFAGRFQYFAWMTDPRTVVVSSDRLLEAKAMV
ERYRKGDQSPPLKPEEVHYNMKLYNSAFHPDTGELQNFCGRMSFQVPGGM
LITGGMLAFYRTVPAVVLWQFINQSFNAVVNYTNRNANSPTSVTQLGVAY
VSATTSALVAAIGCKNYWSKKATPLFQRFVPFAAVAAANFVNIPLMRQNE
IINGIEVKNDDGVVVGQSRLAAIKGIGEVVVSRIAMAAPGMLVLPLIMER
LEKLPAYRRIKWINAPFQTLLVGCFLCFMVPTACALFPQQCSLDTSIMRT
FEPELYEDLEKKTQGKVPKRVYFNKGL*

FI02018.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:37:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23658-PA 327 GF23658-PA 1..327 1..327 1547 89 Plus
Dana\GF16265-PA 321 GF16265-PA 6..306 8..311 650 43.3 Plus
Dana\GF18208-PA 321 GF18208-PA 7..321 8..327 649 42.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:37:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16020-PA 335 GG16020-PA 1..335 1..327 1609 94 Plus
Dere\GG12340-PA 321 GG12340-PA 7..321 8..327 662 43.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:37:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14609-PA 327 GH14609-PA 1..327 1..327 1432 83.5 Plus
Dgri\GH18870-PA 321 GH18870-PA 7..321 8..327 691 45.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:08:45
Subject Length Description Subject Range Query Range Score Percent Strand
Sfxn2-PA 327 CG6812-PA 1..327 1..327 1695 100 Plus
Sfxn1-3-PB 321 CG11739-PB 7..321 8..327 641 43 Plus
Sfxn1-3-PD 321 CG11739-PD 7..321 8..327 641 43 Plus
Sfxn1-3-PA 321 CG11739-PA 7..321 8..327 641 43 Plus
Sfxn1-3-PC 321 CG11739-PC 7..321 8..327 641 43 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:37:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13497-PA 330 GI13497-PA 5..330 6..327 1394 78.3 Plus
Dmoj\GI24728-PA 321 GI24728-PA 7..321 8..327 652 43.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:37:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21744-PA 333 GL21744-PA 2..333 4..327 1482 84.9 Plus
Dper\GL21459-PA 321 GL21459-PA 7..321 8..327 669 44 Plus
Dper\GL10589-PA 321 GL10589-PA 7..321 8..327 660 43.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:37:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19877-PA 333 GA19877-PA 2..333 4..327 1482 84.9 Plus
Dpse\GA26276-PC 321 GA26276-PC 7..321 8..327 669 44 Plus
Dpse\GA26276-PB 321 GA26276-PB 7..321 8..327 669 44 Plus
Dpse\GA26276-PA 321 GA26276-PA 7..321 8..327 669 44 Plus
Dpse\GA24416-PA 538 GA24416-PA 324..538 107..327 421 43.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:37:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15009-PA 327 GM15009-PA 1..327 1..327 1738 99.1 Plus
Dsec\GM10749-PA 321 GM10749-PA 7..321 8..327 656 42.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:37:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14786-PA 327 GD14786-PA 1..327 1..327 1735 99.1 Plus
Dsim\GD19721-PA 321 GD19721-PA 7..321 8..327 656 42.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:37:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11858-PA 331 GJ11858-PA 1..331 1..327 1415 80.7 Plus
Dvir\GJ14554-PA 321 GJ14554-PA 7..321 8..327 692 45.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:37:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10400-PA 331 GK10400-PA 4..331 2..327 1488 84.8 Plus
Dwil\GK13527-PA 321 GK13527-PA 7..321 8..327 642 44 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:37:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19584-PA 327 GE19584-PA 1..327 1..327 1702 96.9 Plus
Dyak\GE23187-PA 292 GE23187-PA 1..292 1..327 1454 85.6 Plus
Dyak\GE25411-PA 321 GE25411-PA 7..321 8..327 658 43.6 Plus

FI02018.hyp Sequence

Translation from 535 to 1518

> FI02018.hyp
MSQVSTLIDVDKPLFDLSTFAGRFQYFAWMTDPRTVVVSSDRLLEAKAMV
ERYRKGDQSPPLKPEEVHYNMKLYNSAFHPDTGELQNFCGRMSFQVPGGM
LITGGMLAFYRTVPAVVLWQFINQSFNAVVNYTNRNANSPTSVTQLGVAY
VSATTSALVAAIGCKNYWSKKATPLFQRFVPFAAVAAANFVNIPLMRQNE
IINGIEVKNDDGVVVGQSRLAAIKGIGEVVVSRIAMAAPGMLVLPLIMER
LEKLPAYRRIKWINAPFQTLLVGCFLCFMVPTACALFPQQCSLDTSIMRT
FEPELYEDLEKKTQGKVPKRVYFNKGL*

FI02018.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:16:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG6812-PA 327 CG6812-PA 1..327 1..327 1695 100 Plus
CG11739-PB 321 CG11739-PB 7..321 8..327 641 43 Plus
CG11739-PD 321 CG11739-PD 7..321 8..327 641 43 Plus
CG11739-PA 321 CG11739-PA 7..321 8..327 641 43 Plus
CG11739-PC 321 CG11739-PC 7..321 8..327 641 43 Plus