Clone FI02030 Report

Search the DGRC for FI02030

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:20
Well:30
Vector:pFlc-1
Associated Gene/Transcripttej-RA
Protein status:FI02030.pep: gold
Sequenced Size:1958

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8589 2008-04-29 Release 5.5 accounting
CG8589 2008-08-15 Release 5.9 accounting
CG8589 2008-12-18 5.12 accounting

Clone Sequence Records

FI02030.complete Sequence

1958 bp assembled on 2007-09-04

GenBank Submission: BT030811

> FI02030.complete
ATTATTTGGAAGCGTGTTAGCGCCTTTTTTGCATGGAATCAGTTCATTCT
AATGAACTATAGTGAAAAGAGGGACGTAAATCTGCAAAATCACAAACATT
AATTCAGCATGGATGATGGAGGGGAGTTGAGCTTGGTGAAGAAAGTTGTC
CACTCGCTGGTGGTGTCCTCACCAGGAAAACTGACCGTTGAGCAGTTGAT
GCGGGATTACCGCAGCGAAGAGGGCTGCACTTTGCCCTACAGCAAACTGG
GATTTAAGGACGCCGAATCCTTTCTCCGATCCATTCCGGATACGGTTACG
GTGACGGGCCACGGACAAATGGCATGGATAACTGCAGTAGCCACTGCCAA
ATCGGCGCACATTCAGAAATTGGTCCGTTGCCAAAAGAAGTCCAAGAATC
GAGGCTCCCACAAACCCAAGTATTGCTACGCCTCCGAGCCATCCAATCTG
GTCTTCATTAACGAAAGCGTCTCTAAAATGAAAAACAGAAAAGCGCCGTT
CCCAACTTATCAGGTGCCCAGAAATCTGAAACTTCCTGTATCATATCCCA
ACTATAATCGACTGTTATATCCCGTCCATACGCCTCATATTGACCAAATG
ATCAGCACCGGACAGCAACAGAGTACCCTTAGAACCCAAAGGCCAAGCTT
TCCATGTAACGCCAACTCCAAGTCATTGAAAGTTAATGATTGGTCGCAGA
AAGACCGAAAACAGGAACCCTCAAAGGAGCGAAACAATCAGAAATATCCT
AAAATAACTACTGAGAATAAGCAAGAGAAAGAAACCGAGGAATTGGCCCA
AGCTTTTGAAAACCTTTCCGTGGATGTTGCTCCCACTGATCACCAAGAAA
AGCTAAAGTGCGAAATATATGAGGATAATGAGGACGAATTCGTGAGAGAC
CCCTTTATCTATGGAGAGGTTAAAGAGAAAGAAGATGAAGCGGTGGTGCT
CGCATTTGACGCCGTTTCCGAGGATGGTTTTGATCTCTTATCGATGACCA
CAACTCAACAGAATGCTGTCAAGCCCCTGGATCCGCCGGAGGATTGCTTA
CACTACGCGTCTTCTGACGATGGGGAAGATGAAAATGCCATTCCAGCTTA
TGCTGTGGACCATCGAGTTCTGGACGTGGACTACCCTAGGGATGCGGTTC
GTTCTGCTTTCACACTGCCTGCTCGCGATATTGAATCCATTATCGAATTA
CAGCAGCGCATTAGGGTGCAGTTGGTGAGTTTGGTCAATCCACACAATTT
TAACTTCTGGATATATAACGATGACTTTAAAGACTACGAGGCACAGTTTG
CCAATATGCAAACGTTTTATGAAAGTTCGGAATCGAAAAATTACACAATG
CCACTGTTTTTGATAACTACGGATCATCTTTGTGTGGTCCGCTGTACGAG
TGGCTGGGAAAGGGCCAAAGTATTAGGTTATCGGTCCAGTAACAACAAAA
TGACGATCGAGGTTGAGCTGGTTGACATAGGGGACATAATCCGCGTGAGC
CAACAGAATGTTAAGTTTTTGATCAAGCCGTTTGCCTTGCTGCCACGTCA
ATGTTTGGCGGGTCGATTGGCGTTTATAACGCAGTGTAAGTCTCCAAACT
GGACCGCAGAAGTTGTTAATTTCTTTCACGATATGATATTATTGCGCCTG
CTTTACGCCAAGGTCGAAGCTATTAAGAACAACACTGCCTATCTTGTGCT
AGTTGATACGGAATCACAAGGACACACTGTTAATTTAAATAGATCGCTCA
TAGAAACTGGTTGGGTGCGGCGCTGCACGAGTGCATAGATTTCTATTATA
TGGATACTGCATTAATTGCTTTAATTACTTTAATGACCAATCTTATTGTT
GAGCACAATTCAAATCCCTATTTGTCGAATAGATTGATTATGTTTCCCAC
AGTATGACTTTAATAAAACTCGTTAAAGTATTATTTTAAGGCAAAAAAAA
AAAAAAAA

FI02030.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:15:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG8589.c 2246 CG8589.c 733..2059 619..1945 6635 100 Plus
CG8589.b 2103 CG8589.b 776..2102 619..1945 6635 100 Plus
CG8589.f 2454 CG8589.f 733..2059 619..1945 6635 100 Plus
CG8589.c 2246 CG8589.c 46..666 1..621 3105 100 Plus
CG8589.b 2103 CG8589.b 89..709 1..621 3105 100 Plus
CG8589.f 2454 CG8589.f 46..666 1..621 3105 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:15:43
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 10188458..10188947 1108..619 2450 100 Minus
chr2R 21145070 chr2R 10187764..10188130 1677..1311 1835 100 Minus
chr2R 21145070 chr2R 10189014..10189335 621..300 1595 99.7 Minus
chr2R 21145070 chr2R 10189391..10189692 302..1 1510 100 Minus
chr2R 21145070 chr2R 10187442..10187708 1942..1676 1335 100 Minus
chr2R 21145070 chr2R 10188196..10188399 1310..1107 1020 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:07:22 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:15:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14301119..14301608 1108..619 2450 100 Minus
2R 25286936 2R 14300425..14300791 1677..1311 1835 100 Minus
2R 25286936 2R 14301675..14301996 621..300 1610 100 Minus
2R 25286936 2R 14302052..14302353 302..1 1510 100 Minus
2R 25286936 2R 14300100..14300369 1945..1676 1350 100 Minus
2R 25286936 2R 14300857..14301060 1310..1107 1020 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:33:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 14302318..14302807 1108..619 2450 100 Minus
2R 25260384 2R 14301624..14301990 1677..1311 1835 100 Minus
2R 25260384 2R 14302874..14303195 621..300 1610 100 Minus
2R 25260384 2R 14303251..14303552 302..1 1510 100 Minus
2R 25260384 2R 14301299..14301568 1945..1676 1350 100 Minus
2R 25260384 2R 14302056..14302259 1310..1107 1020 100 Minus
Blast to na_te.dros performed on 2019-03-16 21:15:41 has no hits.

FI02030.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:16:32 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 10187442..10187706 1678..1942 100 <- Minus
chr2R 10187764..10188130 1311..1677 100 <- Minus
chr2R 10188196..10188398 1108..1310 100 <- Minus
chr2R 10188459..10188944 622..1107 100 <- Minus
chr2R 10189014..10189334 301..621 99 <- Minus
chr2R 10189393..10189692 1..300 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:39:23 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
CG8589-RA 1..1680 109..1788 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:22:50 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
tej-RA 1..1680 109..1788 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:50:54 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
tej-RA 1..1680 109..1788 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:43:17 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
CG8589-RA 1..1680 109..1788 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:12:11 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
tej-RA 1..1680 109..1788 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:38:34 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
CG8589-RA 1..1942 1..1942 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:22:50 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
tej-RA 1..1942 1..1942 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:54 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
tej-RA 1..1942 1..1942 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:43:17 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
CG8589-RA 1..1942 1..1942 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:12:11 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
tej-RA 1..1942 1..1942 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:16:32 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14300103..14300367 1678..1942 100 <- Minus
2R 14300425..14300791 1311..1677 100 <- Minus
2R 14300857..14301059 1108..1310 100 <- Minus
2R 14301120..14301605 622..1107 100 <- Minus
2R 14301675..14301995 301..621 100 <- Minus
2R 14302054..14302353 1..300 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:16:32 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14300103..14300367 1678..1942 100 <- Minus
2R 14300425..14300791 1311..1677 100 <- Minus
2R 14300857..14301059 1108..1310 100 <- Minus
2R 14301120..14301605 622..1107 100 <- Minus
2R 14301675..14301995 301..621 100 <- Minus
2R 14302054..14302353 1..300 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:16:32 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14300103..14300367 1678..1942 100 <- Minus
2R 14300425..14300791 1311..1677 100 <- Minus
2R 14300857..14301059 1108..1310 100 <- Minus
2R 14301120..14301605 622..1107 100 <- Minus
2R 14301675..14301995 301..621 100 <- Minus
2R 14302054..14302353 1..300 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:54 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10187608..10187872 1678..1942 100 <- Minus
arm_2R 10187930..10188296 1311..1677 100 <- Minus
arm_2R 10188362..10188564 1108..1310 100 <- Minus
arm_2R 10188625..10189110 622..1107 100 <- Minus
arm_2R 10189180..10189500 301..621 100 <- Minus
arm_2R 10189559..10189858 1..300 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:54:37 Download gff for FI02030.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14301302..14301566 1678..1942 100 <- Minus
2R 14301624..14301990 1311..1677 100 <- Minus
2R 14302056..14302258 1108..1310 100 <- Minus
2R 14302319..14302804 622..1107 100 <- Minus
2R 14302874..14303194 301..621 100 <- Minus
2R 14303253..14303552 1..300 100   Minus

FI02030.pep Sequence

Translation from 108 to 1787

> FI02030.pep
MDDGGELSLVKKVVHSLVVSSPGKLTVEQLMRDYRSEEGCTLPYSKLGFK
DAESFLRSIPDTVTVTGHGQMAWITAVATAKSAHIQKLVRCQKKSKNRGS
HKPKYCYASEPSNLVFINESVSKMKNRKAPFPTYQVPRNLKLPVSYPNYN
RLLYPVHTPHIDQMISTGQQQSTLRTQRPSFPCNANSKSLKVNDWSQKDR
KQEPSKERNNQKYPKITTENKQEKETEELAQAFENLSVDVAPTDHQEKLK
CEIYEDNEDEFVRDPFIYGEVKEKEDEAVVLAFDAVSEDGFDLLSMTTTQ
QNAVKPLDPPEDCLHYASSDDGEDENAIPAYAVDHRVLDVDYPRDAVRSA
FTLPARDIESIIELQQRIRVQLVSLVNPHNFNFWIYNDDFKDYEAQFANM
QTFYESSESKNYTMPLFLITTDHLCVVRCTSGWERAKVLGYRSSNNKMTI
EVELVDIGDIIRVSQQNVKFLIKPFALLPRQCLAGRLAFITQCKSPNWTA
EVVNFFHDMILLRLLYAKVEAIKNNTAYLVLVDTESQGHTVNLNRSLIET
GWVRRCTSA*

FI02030.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:08:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11357-PA 541 GF11357-PA 1..538 1..556 1033 43.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:08:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22430-PA 560 GG22430-PA 1..560 1..559 1868 65.8 Plus
Dere\GG18502-PA 665 GG18502-PA 231..492 284..551 214 26 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:08:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20095-PA 519 GH20095-PA 1..515 1..555 650 32.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:17
Subject Length Description Subject Range Query Range Score Percent Strand
tej-PA 559 CG8589-PA 1..559 1..559 2928 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:08:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18993-PA 417 GI18993-PA 172..414 314..556 527 43.9 Plus
Dmoj\GI18993-PA 417 GI18993-PA 1..123 1..119 394 61 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:08:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10200-PA 529 GL10200-PA 1..529 1..559 856 39.3 Plus
Dper\GL13477-PA 471 GL13477-PA 236..469 319..555 577 49.6 Plus
Dper\GL13477-PA 471 GL13477-PA 1..237 1..244 304 32.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:08:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21185-PB 594 GA21185-PB 1..594 1..558 835 36.7 Plus
Dpse\GA24775-PA 594 GA24775-PA 1..594 1..558 819 36.3 Plus
Dpse\GA26863-PA 471 GA26863-PA 236..469 319..555 573 49.2 Plus
Dpse\GA26863-PA 471 GA26863-PA 1..237 1..244 314 33.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:08:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20217-PA 563 GM20217-PA 1..562 1..558 2418 80.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:08:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25688-PA 553 GD25688-PA 1..553 1..559 2378 79.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:08:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19957-PA 533 GJ19957-PA 296..530 311..556 540 42.2 Plus
Dvir\GJ19957-PA 533 GJ19957-PA 1..123 1..119 340 56.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:08:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20858-PA 609 GK20858-PA 1..608 1..558 952 38.7 Plus
Dwil\GK23892-PA 420 GK23892-PA 78..304 327..550 195 25.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:08:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12320-PA 562 GE12320-PA 1..562 1..559 1974 68.9 Plus
Dyak\GE16819-PA 583 GE16819-PA 152..389 320..551 177 26.7 Plus

FI02030.hyp Sequence

Translation from 108 to 1787

> FI02030.hyp
MDDGGELSLVKKVVHSLVVSSPGKLTVEQLMRDYRSEEGCTLPYSKLGFK
DAESFLRSIPDTVTVTGHGQMAWITAVATAKSAHIQKLVRCQKKSKNRGS
HKPKYCYASEPSNLVFINESVSKMKNRKAPFPTYQVPRNLKLPVSYPNYN
RLLYPVHTPHIDQMISTGQQQSTLRTQRPSFPCNANSKSLKVNDWSQKDR
KQEPSKERNNQKYPKITTENKQEKETEELAQAFENLSVDVAPTDHQEKLK
CEIYEDNEDEFVRDPFIYGEVKEKEDEAVVLAFDAVSEDGFDLLSMTTTQ
QNAVKPLDPPEDCLHYASSDDGEDENAIPAYAVDHRVLDVDYPRDAVRSA
FTLPARDIESIIELQQRIRVQLVSLVNPHNFNFWIYNDDFKDYEAQFANM
QTFYESSESKNYTMPLFLITTDHLCVVRCTSGWERAKVLGYRSSNNKMTI
EVELVDIGDIIRVSQQNVKFLIKPFALLPRQCLAGRLAFITQCKSPNWTA
EVVNFFHDMILLRLLYAKVEAIKNNTAYLVLVDTESQGHTVNLNRSLIET
GWVRRCTSA*

FI02030.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:17:04
Subject Length Description Subject Range Query Range Score Percent Strand
tej-PA 559 CG8589-PA 1..559 1..559 2928 100 Plus