Clone FI02048 Report

Search the DGRC for FI02048

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:20
Well:48
Vector:pFlc-1
Associated Gene/TranscriptCG17219-RA
Protein status:FI02048.pep: gold
Sequenced Size:1264

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17219 2008-04-29 Release 5.5 accounting
CG17219 2008-08-15 Release 5.9 accounting
CG17219 2008-12-18 5.12 accounting

Clone Sequence Records

FI02048.complete Sequence

1264 bp assembled on 2007-09-19

GenBank Submission: BT030812

> FI02048.complete
AGTTCGAAAAGCGTGGTTTTTGCCGACAGCTGATTTAAGGAGTACGATAT
TTAACAAGCAGTATCTGCTAAAATCAAAACAGTTCAACACCCTACCTTCT
AAGCATGTTCAAATTTAATTTTGATGTGAAGGCGGAATCCTCGGAAGATC
CAGAGGCCGTTAAAAATGATATTTTTAGCAAGCAGGAAAATTCAGAAGAA
CGTGAGTCGGGTATCACAAAGGATATAGATTGGTACAATTCGGAGAAAGT
ACAACCACTGGATAACCTAATTTCGGCAATGGATTTCTATGAGCTTAACG
CCAAGGAAATGGAGGTGGGAAAGATGACGATAAAACATCTTGTGGCCGGG
TTTCTGCTGGAGGATTTAAAGGAGCAATCCCACTTGGTAAACCTGGATCT
CAGGAAGTCTGAGGAAAATCATTCAGATCTGATTTCCGGTGTCTACGAGG
GCGGTGCTAAAATATGGGAATGCACTGAAGATCTTCTACTATATCTATCC
GAAAAGTACGAGGACTCATTCTGGAAGGAGAAAAGAGTCCTAGATTTGGG
ATGTGGCTGCGGATTGCTGGGTATATATGCTATGAAACACGGCGCACGGG
TGGATTTTCAGGACTACAACAAAGATGTGCTGGAATACATAACATATCCA
AATATCCTGCTAAATTTGGACGACTCTTTATCTGAAGATGAAAAGCTGAA
ATTTTTAGACAACAGTACAACCTTATATTCTGGAGATTGGTCTCATTTTG
CTGAACTATCAAGGGATGTGGCGAAATACGATCTAATACTTACCTCTGAG
ACTATATACAATATTGCAAATCAGCAAAAGCTCTTGGATACCTTTGCTGG
TCGCTTAAAATCCGATGGAGTCATTTTGGTTGCCGCAAAATCTCATTATT
TTGGAGTTGGTGGCGGCCTGGAACAGTTTTCAGAGAACATTAGGCTGGGA
AATGTTTTCCAAAGTGAGAGTGTTTGGCAGGCAGACGAAAACTTAAAAAG
AGGAATCTTGCAATTGAAATTTAAATAAAATATATTTTGGAATTATTTAT
AACACAATTCTTAAACTTTGTAATAATGATAAGAGATCTAAGTTCAAAAC
ATAGCGGTAGCATAAAACAAGTTGGCAGCCCACTTTACACGGGGCACCCT
GTAAGGGAGGGACGTTCGTCAGCTGTGTTGTTGTAGTTGTCGTTATTCCG
GAGAAATTGTAAGCAAATTCGTTGTACTCCAATAAAACAATTAAAATGGA
AAAAAAAAAAAAAA

FI02048.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:51:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG17219-RA 1271 CG17219-RA 21..1270 1..1250 6235 99.9 Plus
GABPI-RA 1627 GABPI-RA 1..56 1195..1250 280 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:35:12
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 3029624..3030255 618..1249 3160 100 Plus
chr2L 23010047 chr2L 3028995..3029571 41..617 2885 100 Plus
chr2L 23010047 chr2L 3028896..3028937 1..42 195 97.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:07:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:35:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3029985..3030617 618..1250 3165 100 Plus
2L 23513712 2L 3029356..3029932 41..617 2885 100 Plus
2L 23513712 2L 3029257..3029298 1..42 195 97.6 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:48:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3029985..3030617 618..1250 3165 100 Plus
2L 23513712 2L 3029356..3029932 41..617 2885 100 Plus
2L 23513712 2L 3029257..3029298 1..42 195 97.6 Plus
Blast to na_te.dros performed 2019-03-15 19:35:10
Subject Length Description Subject Range Query Range Score Percent Strand
Idefix 7411 Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). 871..1021 985..1133 127 60 Plus
Idefix 7411 Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). 832..950 985..1098 123 62 Plus

FI02048.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:36:24 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 3028896..3028937 1..42 97 -> Plus
chr2L 3028997..3029571 43..617 100 -> Plus
chr2L 3029624..3030255 618..1249 96   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:39:32 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
CG17219-RA 1..924 105..1028 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:37:20 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
CG17219-RA 1..924 105..1028 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 04:59:22 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
CG17219-RA 1..924 105..1028 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:42:39 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
CG17219-RA 1..924 105..1028 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:03:27 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
CG17219-RA 1..924 105..1028 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:06:14 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
CG17219-RA 1..1249 1..1249 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:37:20 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
CG17219-RA 7..1255 1..1249 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:59:22 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
CG17219-RA 5..1253 1..1249 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:42:39 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
CG17219-RA 1..1249 1..1249 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:03:27 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
CG17219-RA 5..1253 1..1249 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:36:24 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3029257..3029298 1..42 97 -> Plus
2L 3029358..3029932 43..617 100 -> Plus
2L 3029985..3030616 618..1249 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:36:24 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3029257..3029298 1..42 97 -> Plus
2L 3029358..3029932 43..617 100 -> Plus
2L 3029985..3030616 618..1249 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:36:24 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3029257..3029298 1..42 97 -> Plus
2L 3029358..3029932 43..617 100 -> Plus
2L 3029985..3030616 618..1249 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:59:22 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3029257..3029298 1..42 97 -> Plus
arm_2L 3029358..3029932 43..617 100 -> Plus
arm_2L 3029985..3030616 618..1249 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:20:20 Download gff for FI02048.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3029358..3029932 43..617 100 -> Plus
2L 3029985..3030616 618..1249 100   Plus
2L 3029257..3029298 1..42 97 -> Plus

FI02048.hyp Sequence

Translation from 104 to 1027

> FI02048.hyp
MFKFNFDVKAESSEDPEAVKNDIFSKQENSEERESGITKDIDWYNSEKVQ
PLDNLISAMDFYELNAKEMEVGKMTIKHLVAGFLLEDLKEQSHLVNLDLR
KSEENHSDLISGVYEGGAKIWECTEDLLLYLSEKYEDSFWKEKRVLDLGC
GCGLLGIYAMKHGARVDFQDYNKDVLEYITYPNILLNLDDSLSEDEKLKF
LDNSTTLYSGDWSHFAELSRDVAKYDLILTSETIYNIANQQKLLDTFAGR
LKSDGVILVAAKSHYFGVGGGLEQFSENIRLGNVFQSESVWQADENLKRG
ILQLKFK*

FI02048.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:17:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG17219-PA 307 CG17219-PA 1..307 1..307 1594 100 Plus

FI02048.pep Sequence

Translation from 104 to 1027

> FI02048.pep
MFKFNFDVKAESSEDPEAVKNDIFSKQENSEERESGITKDIDWYNSEKVQ
PLDNLISAMDFYELNAKEMEVGKMTIKHLVAGFLLEDLKEQSHLVNLDLR
KSEENHSDLISGVYEGGAKIWECTEDLLLYLSEKYEDSFWKEKRVLDLGC
GCGLLGIYAMKHGARVDFQDYNKDVLEYITYPNILLNLDDSLSEDEKLKF
LDNSTTLYSGDWSHFAELSRDVAKYDLILTSETIYNIANQQKLLDTFAGR
LKSDGVILVAAKSHYFGVGGGLEQFSENIRLGNVFQSESVWQADENLKRG
ILQLKFK*

FI02048.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:08:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15142-PA 308 GF15142-PA 1..308 1..307 1097 70.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:08:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24912-PA 308 GG24912-PA 1..308 1..307 1448 89.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:08:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11397-PA 309 GH11397-PA 1..306 1..307 970 57.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG17219-PA 307 CG17219-PA 1..307 1..307 1594 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:08:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14527-PA 305 GI14527-PA 1..305 1..307 959 59.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:08:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18544-PA 307 GL18544-PA 1..307 1..307 1018 62.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:08:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14398-PA 307 GA14398-PA 1..307 1..307 1019 62.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:08:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18388-PA 307 GM18388-PA 1..307 1..307 1565 96.7 Plus
Dsec\GM23470-PA 136 GM23470-PA 1..136 172..307 686 97.1 Plus
Dsec\GM16957-PA 136 GM16957-PA 1..136 172..307 686 97.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:08:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23200-PA 307 GD23200-PA 1..307 1..307 1565 97.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:08:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16916-PA 306 GJ16916-PA 1..306 1..307 934 58.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:08:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15177-PA 302 GK15177-PA 1..302 1..307 987 59.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:08:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18203-PA 307 GE18203-PA 1..307 1..307 1454 89.6 Plus