BDGP Sequence Production Resources |
Search the DGRC for FI02061
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 20 |
Well: | 61 |
Vector: | pFlc-1 |
Associated Gene/Transcript | vimar-RC |
Protein status: | FI02061.pep: gold |
Sequenced Size: | 3482 |
Gene | Date | Evidence |
---|---|---|
vimar | 2008-12-18 | 5.12 accounting |
3482 bp assembled on 2008-09-23
GenBank Submission: BT044558.1
> FI02061.complete AGACTAGAATTGCAGTTGTTGGTGTGAACGTCTGAACGCGATTCGGAAAA TACGGATTACACGGATAATACGAATTATACGGATATTGCGGAAGTTGAAC GGAGACGCGACTGAAAGAAAGCCGTGAAATGTGTTCAGTTGCGCGCAGCA GTCATTAGCCTATCAGCAGTGTTTGTTACAAGCTAACAGTGATACAACGT GCCTGGAATCGCAACCAACGCAGAGCAAGAAAAGCAGAAAAGCATAAAAA CGGAAGAAGCAGCAGCGGAATAATCAACAAAGGCGGCAAACATGGCGACA GCTGAAATCGACGATTTGATTGAAAAGCTGAAGACGACCAGTGTCAGTCC GGCGAACACGACCAACTTGCTCTGCGAGATCTCGGCGACGAAGGACCCCA AACTTTTCGATAAGCACGAGCTGGCAGAGTGCTTTCTGGGCCTCACCAAG TGCGACGACACAAACGTGCGCAAGGAGGCGGCCAAGTGCATTGCGGAGAT CACCAAGTCCGAGGTGCAGCGCAAGAAGTTCACCAAGAGGAATATAATAG CCGCATTTCTGGAGTGCTTGCGACAAGTGCCCACGTCCGACGGCAGTATG GAGCTGCCCATACAGATTTGTCGGGCACTGGGCAATATCTGCTACCTAAA CGACGAAGCCAGGGACTTAATACTCGAGCTGGAGGGCGATGCTGTTCTAC TGCGACTGCTGGACATCACAACCATCGAGGACGTGGCCAATGCGGCGCAA TTCATCAAAGTGCGCGGCGGCTTGCTGTCCAACTATTTGCTCGGAGGCGA GGGCTTGGCCAAGCGGGCCATGGAGTTGGGCGTGATGAAGAAGCTGCAAG GCATCATCGACATTGGCGCCTCCAATGTGGAACAGCATGAGGATCTGCTG CTGAACACGCTTCCACTGCTCAGTATACTCACCGAGAACGTGTCGGATCT GAACTTCGACTCTTCCCTGAATATCCAGCTGTCTCGCATTCTGGCCGCTT CCACGAATCCCGATCTTGCCGAGATGTGCCTGGAGCTGCTCCATTACCAG GCGGAGAGCGACGAAGTCAAGCTTATTTTGGCCAAGGACGGTCTGTGCGA AACCATCTACAACCTGCTGGAAAAGTACAAGACTCTGGCCAGCACAAGTG AGGCCAGGGCGTTGATGAAACTCGCCTGCGAACTCATCGTATTAATCCTT ACTGGTGATGACTCAATGCACTATTTGTACACCACGCCGCTGCTGAAGAA CATGGTCGATTGGCTGGACTCGACGGACATCGATCTGCTAACCACCGGCG TGCTGGCCCTGGGCAACTTTGCGCGCACCGATAGCCACTGCATCTACTTT GTGGAGCAGCAGACCATGAACAAGCTGCTCGAGGTGCTGGCCAAGAACAA CGGCGTCAAGGACGATGTGCGCCTGCAGCACGCTCTTCTCTCCGCGCTGC GCAACCTGGTCATCCCGAAGCCAAACAAGAACGCGGTAATCCAGGCGGGC CTGGTGCAGACCATTCTTCCCATGCTCGAAATACACCAGCCACCAGTCGT CTTCAAGCTGCTGGGCACACTTCGCATGACCGTCGACGGACAGGAGAAAC TCGCACTGGAGTTGCTGAAGAACAAGACTCTGATCGAGCAGCTGGTGCAC TGGAGCAAATCGTCGGACTATGCGGGCGTCACCGGCGAGTCTCTGCGCCT CATGGCCTGGCTGATCAAGCACGCCTACCTCAGCAAAATCGCATACGCAC TGCCGCGCAAGGGCGATGCACCCGCCGAACAGATTGCCGACAAGATTCCG CTAACGCAAGACTACGATCGCAGTAGCTTGAGCGAGTTCCTTGCCAACGA GGGCACCGTGGAGGCCATGGTCAGCATGCTCACAGCTCAGCACCTGGTCA TGCAGAACGAGGCGCTGATTGCCCTGTGCATCCTGTCCGTGGTGTACCTG TCGCAGCCCAGCGAGGCGGCGCAGGCCCAGCTGCTGCAGGACGAGCTGGT CAAGTGCGAGGTCGGCAAGAAGTTGGCCGAGCTCATCAGCAAGTCGTCGG ACACGATGACCAAGGAGATTGTCGAGAACCTGCAGAACTGCGTGAACTTG CTCAAATCTTCCGAGCAGCTGGTGGCGCATCTGGAACAGCATAACATCAA CGAGCTGCTGAAGTCTATACCCATTCTCACCGAATACTGCACCTTGTAAG AAAACGGGGACTGTCATTGCATTTATCCCAGCACCGCAGGATGCCTCACA GTGGGATGGGTCGATTTGCACGATTGAACATAACATAAATACTTTAGGGG TAAGCAGTTATCTTTGGAAGTTATCTGTGTGGTCTTACCAAGAGAAACGC CAATACTTATTCGTAACGATACAAAGATTAATACGTTGCGCTAATGTGCT AAACTCCACTTTACTACTTAATAACAATTTTGTTAAATTGTAATTAAATC CACTCTCTTGAGATTCACTGACGTTGCACGATTCCAAATAGCCAAAGATA AATGTTTGCCACTATTAGAGCATGTTTTAAAAAAAATCAGCCCACCCTTA GCCACACAGACACACTCAGAACCGGAGAAAATAGTAGTTTTCACCCCAAA GCAACGATTCAGATGTAGACTTGACTGTAGTTTGGTAAGAAGAAAGTGCA GATTCACAAGTTAAGCAGTTAATCAGTTAAGCACACTGGAACACGCGAAC ACGAGAGGAGCAGAAAGTATTTTTTAGACGCAAGCGTATTTTGACTGCAT TTATGAAGAGAATCCGATGTAGTAAGGAGTCACAAATCGTATGAATATTT ATAGCATACATACATAACATATACGTATAAATATAATAATATTAATAATT TAGCATATTAATCTTTTCTGTTACATGATTTTTAAGAGCACAATAACAAC AAATCGTGGTGATATCGCTAAATATATTTAATAAATGTATTTTATGATTG TACTTATAATTTTCAATCGACCTCTTTTAAACCGTTGCTGGCACAAACCA AAAACGAGAAGATAACAAAACATTTAGACGCACGACGTAATTAAGGTATT TTAATTGGTGCACAGACACATATTGCAAACGGCATCCCATATATTTATTG TAAAACTCGGCGAAGTTATCCAAAATGCATTTTTAAGCTAACTTTAAAAC ATTAACAAAACTGCAACTCAGTAACAATCAGCAATCCGAAAATAGTTGAA AACCAATAATGCAAATATTTCAATTTTACAAATCGTAGTTTATGGAGTGC TACAAATTTTACCAATTATTAAAAACGATGTACTAATGTTTGGTCACCAA AAACTAAAAATTAAACGAACACAATTCAAGGGGAATGGTGTTAATATATA AAGCGTTGAGACACCCACACACATAAATGCGAAAACATATTTATGAACTC TAAACACAATAATGTACATTTAATAATTCAAATAAAATTTGAAATGCATG AGAAATAAGAGAAAACCAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 2862695..2864569 | 3467..1594 | 9250 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 2865103..2866011 | 1207..299 | 4530 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 2864627..2865014 | 1594..1207 | 1940 | 100 | Minus |
chr2R | 21145070 | chr2R | 2872823..2873118 | 298..3 | 1480 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 6975282..6977158 | 3470..1594 | 9385 | 100 | Minus |
2R | 25286936 | 2R | 6977692..6978600 | 1207..299 | 4545 | 100 | Minus |
2R | 25286936 | 2R | 6977216..6977603 | 1594..1207 | 1940 | 100 | Minus |
2R | 25286936 | 2R | 6985412..6985707 | 298..3 | 1480 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 6976481..6978357 | 3470..1594 | 9385 | 100 | Minus |
2R | 25260384 | 2R | 6978891..6979799 | 1207..299 | 4545 | 100 | Minus |
2R | 25260384 | 2R | 6978415..6978802 | 1594..1207 | 1940 | 100 | Minus |
2R | 25260384 | 2R | 6986611..6986906 | 298..3 | 1480 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6577..7001 | 3023..3458 | 154 | 54.1 | Plus |
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 542..827 | 3172..3465 | 144 | 54.8 | Plus |
Dkoe\Gandalf | 979 | Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). | 756..893 | 3325..3186 | 138 | 59.7 | Minus |
412 | 7567 | 412 412 7567bp | 6953..7016 | 3370..3435 | 136 | 69.7 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 927..1003 | 2526..2603 | 135 | 68.8 | Plus |
Dmir\TRAM | 3452 | Dmir\TRAM DMTRAM 3452bp Derived from Y08905 (Rel. 51, Last updated, Version 3). | 2698..2789 | 1352..1440 | 128 | 66 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 2862695..2864568 | 1595..3467 | 98 | <- | Minus |
chr2R | 2864627..2865013 | 1208..1594 | 100 | <- | Minus |
chr2R | 2865103..2866011 | 299..1207 | 99 | <- | Minus |
chr2R | 2872823..2873120 | 1..298 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vimar-RC | 1..1908 | 292..2199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vimar-RC | 1..1908 | 292..2199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vimar-RC | 1..1908 | 292..2199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vimar-RC | 1..3467 | 1..3467 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vimar-RC | 1..3467 | 1..3467 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vimar-RC | 4..3470 | 1..3467 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vimar-RC | 1..3467 | 1..3467 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vimar-RC | 4..3470 | 1..3467 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6975285..6977157 | 1595..3467 | 100 | <- | Minus |
2R | 6977216..6977602 | 1208..1594 | 100 | <- | Minus |
2R | 6977692..6978600 | 299..1207 | 100 | <- | Minus |
2R | 6985412..6985709 | 1..298 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6975285..6977157 | 1595..3467 | 100 | <- | Minus |
2R | 6977216..6977602 | 1208..1594 | 100 | <- | Minus |
2R | 6977692..6978600 | 299..1207 | 100 | <- | Minus |
2R | 6985412..6985709 | 1..298 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6975285..6977157 | 1595..3467 | 100 | <- | Minus |
2R | 6977216..6977602 | 1208..1594 | 100 | <- | Minus |
2R | 6977692..6978600 | 299..1207 | 100 | <- | Minus |
2R | 6985412..6985709 | 1..298 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 2862790..2864662 | 1595..3467 | 100 | <- | Minus |
arm_2R | 2864721..2865107 | 1208..1594 | 100 | <- | Minus |
arm_2R | 2865197..2866105 | 299..1207 | 100 | <- | Minus |
arm_2R | 2872917..2873214 | 1..298 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6976484..6978356 | 1595..3467 | 100 | <- | Minus |
2R | 6978415..6978801 | 1208..1594 | 100 | <- | Minus |
2R | 6978891..6979799 | 299..1207 | 100 | <- | Minus |
2R | 6986611..6986908 | 1..298 | 99 | Minus |
Translation from 291 to 2198
> FI02061.pep MATAEIDDLIEKLKTTSVSPANTTNLLCEISATKDPKLFDKHELAECFLG LTKCDDTNVRKEAAKCIAEITKSEVQRKKFTKRNIIAAFLECLRQVPTSD GSMELPIQICRALGNICYLNDEARDLILELEGDAVLLRLLDITTIEDVAN AAQFIKVRGGLLSNYLLGGEGLAKRAMELGVMKKLQGIIDIGASNVEQHE DLLLNTLPLLSILTENVSDLNFDSSLNIQLSRILAASTNPDLAEMCLELL HYQAESDEVKLILAKDGLCETIYNLLEKYKTLASTSEARALMKLACELIV LILTGDDSMHYLYTTPLLKNMVDWLDSTDIDLLTTGVLALGNFARTDSHC IYFVEQQTMNKLLEVLAKNNGVKDDVRLQHALLSALRNLVIPKPNKNAVI QAGLVQTILPMLEIHQPPVVFKLLGTLRMTVDGQEKLALELLKNKTLIEQ LVHWSKSSDYAGVTGESLRLMAWLIKHAYLSKIAYALPRKGDAPAEQIAD KIPLTQDYDRSSLSEFLANEGTVEAMVSMLTAQHLVMQNEALIALCILSV VYLSQPSEAAQAQLLQDELVKCEVGKKLAELISKSSDTMTKEIVENLQNC VNLLKSSEQLVAHLEQHNINELLKSIPILTEYCTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11753-PA | 632 | GF11753-PA | 1..632 | 6..635 | 3075 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10781-PA | 673 | GG10781-PA | 41..673 | 3..635 | 3242 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20393-PA | 631 | GH20393-PA | 1..631 | 6..635 | 3010 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
vimar-PC | 635 | CG3572-PC | 1..635 | 1..635 | 3173 | 100 | Plus |
vimar-PB | 634 | CG3572-PB | 1..634 | 1..635 | 3157 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20062-PA | 571 | GI20062-PA | 3..571 | 68..635 | 2726 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10958-PA | 639 | GL10958-PA | 1..639 | 1..635 | 3052 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24543-PA | 639 | GA24543-PA | 1..639 | 1..635 | 3052 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20831-PA | 761 | GM20831-PA | 127..761 | 1..635 | 3257 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10283-PA | 579 | GD10283-PA | 6..579 | 5..585 | 2834 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14960-PA | 631 | GJ14960-PA | 1..631 | 6..635 | 3000 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21536-PA | 666 | GK21536-PA | 33..666 | 3..635 | 3027 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24302-PA | 533 | GE24302-PA | 1..533 | 103..635 | 2750 | 98.9 | Plus |
Translation from 291 to 2198
> FI02061.hyp MATAEIDDLIEKLKTTSVSPANTTNLLCEISATKDPKLFDKHELAECFLG LTKCDDTNVRKEAAKCIAEITKSEVQRKKFTKRNIIAAFLECLRQVPTSD GSMELPIQICRALGNICYLNDEARDLILELEGDAVLLRLLDITTIEDVAN AAQFIKVRGGLLSNYLLGGEGLAKRAMELGVMKKLQGIIDIGASNVEQHE DLLLNTLPLLSILTENVSDLNFDSSLNIQLSRILAASTNPDLAEMCLELL HYQAESDEVKLILAKDGLCETIYNLLEKYKTLASTSEARALMKLACELIV LILTGDDSMHYLYTTPLLKNMVDWLDSTDIDLLTTGVLALGNFARTDSHC IYFVEQQTMNKLLEVLAKNNGVKDDVRLQHALLSALRNLVIPKPNKNAVI QAGLVQTILPMLEIHQPPVVFKLLGTLRMTVDGQEKLALELLKNKTLIEQ LVHWSKSSDYAGVTGESLRLMAWLIKHAYLSKIAYALPRKGDAPAEQIAD KIPLTQDYDRSSLSEFLANEGTVEAMVSMLTAQHLVMQNEALIALCILSV VYLSQPSEAAQAQLLQDELVKCEVGKKLAELISKSSDTMTKEIVENLQNC VNLLKSSEQLVAHLEQHNINELLKSIPILTEYCTL*