Clone FI02061 Report

Search the DGRC for FI02061

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:20
Well:61
Vector:pFlc-1
Associated Gene/Transcriptvimar-RC
Protein status:FI02061.pep: gold
Sequenced Size:3482

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
vimar 2008-12-18 5.12 accounting

Clone Sequence Records

FI02061.complete Sequence

3482 bp assembled on 2008-09-23

GenBank Submission: BT044558.1

> FI02061.complete
AGACTAGAATTGCAGTTGTTGGTGTGAACGTCTGAACGCGATTCGGAAAA
TACGGATTACACGGATAATACGAATTATACGGATATTGCGGAAGTTGAAC
GGAGACGCGACTGAAAGAAAGCCGTGAAATGTGTTCAGTTGCGCGCAGCA
GTCATTAGCCTATCAGCAGTGTTTGTTACAAGCTAACAGTGATACAACGT
GCCTGGAATCGCAACCAACGCAGAGCAAGAAAAGCAGAAAAGCATAAAAA
CGGAAGAAGCAGCAGCGGAATAATCAACAAAGGCGGCAAACATGGCGACA
GCTGAAATCGACGATTTGATTGAAAAGCTGAAGACGACCAGTGTCAGTCC
GGCGAACACGACCAACTTGCTCTGCGAGATCTCGGCGACGAAGGACCCCA
AACTTTTCGATAAGCACGAGCTGGCAGAGTGCTTTCTGGGCCTCACCAAG
TGCGACGACACAAACGTGCGCAAGGAGGCGGCCAAGTGCATTGCGGAGAT
CACCAAGTCCGAGGTGCAGCGCAAGAAGTTCACCAAGAGGAATATAATAG
CCGCATTTCTGGAGTGCTTGCGACAAGTGCCCACGTCCGACGGCAGTATG
GAGCTGCCCATACAGATTTGTCGGGCACTGGGCAATATCTGCTACCTAAA
CGACGAAGCCAGGGACTTAATACTCGAGCTGGAGGGCGATGCTGTTCTAC
TGCGACTGCTGGACATCACAACCATCGAGGACGTGGCCAATGCGGCGCAA
TTCATCAAAGTGCGCGGCGGCTTGCTGTCCAACTATTTGCTCGGAGGCGA
GGGCTTGGCCAAGCGGGCCATGGAGTTGGGCGTGATGAAGAAGCTGCAAG
GCATCATCGACATTGGCGCCTCCAATGTGGAACAGCATGAGGATCTGCTG
CTGAACACGCTTCCACTGCTCAGTATACTCACCGAGAACGTGTCGGATCT
GAACTTCGACTCTTCCCTGAATATCCAGCTGTCTCGCATTCTGGCCGCTT
CCACGAATCCCGATCTTGCCGAGATGTGCCTGGAGCTGCTCCATTACCAG
GCGGAGAGCGACGAAGTCAAGCTTATTTTGGCCAAGGACGGTCTGTGCGA
AACCATCTACAACCTGCTGGAAAAGTACAAGACTCTGGCCAGCACAAGTG
AGGCCAGGGCGTTGATGAAACTCGCCTGCGAACTCATCGTATTAATCCTT
ACTGGTGATGACTCAATGCACTATTTGTACACCACGCCGCTGCTGAAGAA
CATGGTCGATTGGCTGGACTCGACGGACATCGATCTGCTAACCACCGGCG
TGCTGGCCCTGGGCAACTTTGCGCGCACCGATAGCCACTGCATCTACTTT
GTGGAGCAGCAGACCATGAACAAGCTGCTCGAGGTGCTGGCCAAGAACAA
CGGCGTCAAGGACGATGTGCGCCTGCAGCACGCTCTTCTCTCCGCGCTGC
GCAACCTGGTCATCCCGAAGCCAAACAAGAACGCGGTAATCCAGGCGGGC
CTGGTGCAGACCATTCTTCCCATGCTCGAAATACACCAGCCACCAGTCGT
CTTCAAGCTGCTGGGCACACTTCGCATGACCGTCGACGGACAGGAGAAAC
TCGCACTGGAGTTGCTGAAGAACAAGACTCTGATCGAGCAGCTGGTGCAC
TGGAGCAAATCGTCGGACTATGCGGGCGTCACCGGCGAGTCTCTGCGCCT
CATGGCCTGGCTGATCAAGCACGCCTACCTCAGCAAAATCGCATACGCAC
TGCCGCGCAAGGGCGATGCACCCGCCGAACAGATTGCCGACAAGATTCCG
CTAACGCAAGACTACGATCGCAGTAGCTTGAGCGAGTTCCTTGCCAACGA
GGGCACCGTGGAGGCCATGGTCAGCATGCTCACAGCTCAGCACCTGGTCA
TGCAGAACGAGGCGCTGATTGCCCTGTGCATCCTGTCCGTGGTGTACCTG
TCGCAGCCCAGCGAGGCGGCGCAGGCCCAGCTGCTGCAGGACGAGCTGGT
CAAGTGCGAGGTCGGCAAGAAGTTGGCCGAGCTCATCAGCAAGTCGTCGG
ACACGATGACCAAGGAGATTGTCGAGAACCTGCAGAACTGCGTGAACTTG
CTCAAATCTTCCGAGCAGCTGGTGGCGCATCTGGAACAGCATAACATCAA
CGAGCTGCTGAAGTCTATACCCATTCTCACCGAATACTGCACCTTGTAAG
AAAACGGGGACTGTCATTGCATTTATCCCAGCACCGCAGGATGCCTCACA
GTGGGATGGGTCGATTTGCACGATTGAACATAACATAAATACTTTAGGGG
TAAGCAGTTATCTTTGGAAGTTATCTGTGTGGTCTTACCAAGAGAAACGC
CAATACTTATTCGTAACGATACAAAGATTAATACGTTGCGCTAATGTGCT
AAACTCCACTTTACTACTTAATAACAATTTTGTTAAATTGTAATTAAATC
CACTCTCTTGAGATTCACTGACGTTGCACGATTCCAAATAGCCAAAGATA
AATGTTTGCCACTATTAGAGCATGTTTTAAAAAAAATCAGCCCACCCTTA
GCCACACAGACACACTCAGAACCGGAGAAAATAGTAGTTTTCACCCCAAA
GCAACGATTCAGATGTAGACTTGACTGTAGTTTGGTAAGAAGAAAGTGCA
GATTCACAAGTTAAGCAGTTAATCAGTTAAGCACACTGGAACACGCGAAC
ACGAGAGGAGCAGAAAGTATTTTTTAGACGCAAGCGTATTTTGACTGCAT
TTATGAAGAGAATCCGATGTAGTAAGGAGTCACAAATCGTATGAATATTT
ATAGCATACATACATAACATATACGTATAAATATAATAATATTAATAATT
TAGCATATTAATCTTTTCTGTTACATGATTTTTAAGAGCACAATAACAAC
AAATCGTGGTGATATCGCTAAATATATTTAATAAATGTATTTTATGATTG
TACTTATAATTTTCAATCGACCTCTTTTAAACCGTTGCTGGCACAAACCA
AAAACGAGAAGATAACAAAACATTTAGACGCACGACGTAATTAAGGTATT
TTAATTGGTGCACAGACACATATTGCAAACGGCATCCCATATATTTATTG
TAAAACTCGGCGAAGTTATCCAAAATGCATTTTTAAGCTAACTTTAAAAC
ATTAACAAAACTGCAACTCAGTAACAATCAGCAATCCGAAAATAGTTGAA
AACCAATAATGCAAATATTTCAATTTTACAAATCGTAGTTTATGGAGTGC
TACAAATTTTACCAATTATTAAAAACGATGTACTAATGTTTGGTCACCAA
AAACTAAAAATTAAACGAACACAATTCAAGGGGAATGGTGTTAATATATA
AAGCGTTGAGACACCCACACACATAAATGCGAAAACATATTTATGAACTC
TAAACACAATAATGTACATTTAATAATTCAAATAAAATTTGAAATGCATG
AGAAATAAGAGAAAACCAAAAAAAAAAAAAAA

FI02061.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:09:02
Subject Length Description Subject Range Query Range Score Percent Strand
vimar-RC 3470 vimar-RC 3..3470 3..3470 17340 100 Plus
vimar-RB 3484 vimar-RB 20..3484 3..3470 17270 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:02:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 2862695..2864569 3467..1594 9250 99.7 Minus
chr2R 21145070 chr2R 2865103..2866011 1207..299 4530 99.9 Minus
chr2R 21145070 chr2R 2864627..2865014 1594..1207 1940 100 Minus
chr2R 21145070 chr2R 2872823..2873118 298..3 1480 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:07:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:02:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6975282..6977158 3470..1594 9385 100 Minus
2R 25286936 2R 6977692..6978600 1207..299 4545 100 Minus
2R 25286936 2R 6977216..6977603 1594..1207 1940 100 Minus
2R 25286936 2R 6985412..6985707 298..3 1480 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:27:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 6976481..6978357 3470..1594 9385 100 Minus
2R 25260384 2R 6978891..6979799 1207..299 4545 100 Minus
2R 25260384 2R 6978415..6978802 1594..1207 1940 100 Minus
2R 25260384 2R 6986611..6986906 298..3 1480 100 Minus
Blast to na_te.dros performed 2019-03-16 18:02:21
Subject Length Description Subject Range Query Range Score Percent Strand
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6577..7001 3023..3458 154 54.1 Plus
Dana\Tom 7060 Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). 542..827 3172..3465 144 54.8 Plus
Dkoe\Gandalf 979 Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). 756..893 3325..3186 138 59.7 Minus
412 7567 412 412 7567bp 6953..7016 3370..3435 136 69.7 Plus
TART-C 11124 TART-C TARTC 11124bp 927..1003 2526..2603 135 68.8 Plus
Dmir\TRAM 3452 Dmir\TRAM DMTRAM 3452bp Derived from Y08905 (Rel. 51, Last updated, Version 3). 2698..2789 1352..1440 128 66 Plus

FI02061.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:03:01 Download gff for FI02061.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 2862695..2864568 1595..3467 98 <- Minus
chr2R 2864627..2865013 1208..1594 100 <- Minus
chr2R 2865103..2866011 299..1207 99 <- Minus
chr2R 2872823..2873120 1..298 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:13:11 Download gff for FI02061.complete
Subject Subject Range Query Range Percent Splice Strand
vimar-RC 1..1908 292..2199 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:44:15 Download gff for FI02061.complete
Subject Subject Range Query Range Percent Splice Strand
vimar-RC 1..1908 292..2199 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:28:05 Download gff for FI02061.complete
Subject Subject Range Query Range Percent Splice Strand
vimar-RC 1..1908 292..2199 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:39:57 Download gff for FI02061.complete
Subject Subject Range Query Range Percent Splice Strand
vimar-RC 1..3467 1..3467 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:13:11 Download gff for FI02061.complete
Subject Subject Range Query Range Percent Splice Strand
vimar-RC 1..3467 1..3467 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:44:15 Download gff for FI02061.complete
Subject Subject Range Query Range Percent Splice Strand
vimar-RC 4..3470 1..3467 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 15:42:12 Download gff for FI02061.complete
Subject Subject Range Query Range Percent Splice Strand
vimar-RC 1..3467 1..3467 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:28:05 Download gff for FI02061.complete
Subject Subject Range Query Range Percent Splice Strand
vimar-RC 4..3470 1..3467 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:03:01 Download gff for FI02061.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6975285..6977157 1595..3467 100 <- Minus
2R 6977216..6977602 1208..1594 100 <- Minus
2R 6977692..6978600 299..1207 100 <- Minus
2R 6985412..6985709 1..298 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:03:01 Download gff for FI02061.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6975285..6977157 1595..3467 100 <- Minus
2R 6977216..6977602 1208..1594 100 <- Minus
2R 6977692..6978600 299..1207 100 <- Minus
2R 6985412..6985709 1..298 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:03:01 Download gff for FI02061.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6975285..6977157 1595..3467 100 <- Minus
2R 6977216..6977602 1208..1594 100 <- Minus
2R 6977692..6978600 299..1207 100 <- Minus
2R 6985412..6985709 1..298 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:15 Download gff for FI02061.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2862790..2864662 1595..3467 100 <- Minus
arm_2R 2864721..2865107 1208..1594 100 <- Minus
arm_2R 2865197..2866105 299..1207 100 <- Minus
arm_2R 2872917..2873214 1..298 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:43:47 Download gff for FI02061.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6976484..6978356 1595..3467 100 <- Minus
2R 6978415..6978801 1208..1594 100 <- Minus
2R 6978891..6979799 299..1207 100 <- Minus
2R 6986611..6986908 1..298 99   Minus

FI02061.pep Sequence

Translation from 291 to 2198

> FI02061.pep
MATAEIDDLIEKLKTTSVSPANTTNLLCEISATKDPKLFDKHELAECFLG
LTKCDDTNVRKEAAKCIAEITKSEVQRKKFTKRNIIAAFLECLRQVPTSD
GSMELPIQICRALGNICYLNDEARDLILELEGDAVLLRLLDITTIEDVAN
AAQFIKVRGGLLSNYLLGGEGLAKRAMELGVMKKLQGIIDIGASNVEQHE
DLLLNTLPLLSILTENVSDLNFDSSLNIQLSRILAASTNPDLAEMCLELL
HYQAESDEVKLILAKDGLCETIYNLLEKYKTLASTSEARALMKLACELIV
LILTGDDSMHYLYTTPLLKNMVDWLDSTDIDLLTTGVLALGNFARTDSHC
IYFVEQQTMNKLLEVLAKNNGVKDDVRLQHALLSALRNLVIPKPNKNAVI
QAGLVQTILPMLEIHQPPVVFKLLGTLRMTVDGQEKLALELLKNKTLIEQ
LVHWSKSSDYAGVTGESLRLMAWLIKHAYLSKIAYALPRKGDAPAEQIAD
KIPLTQDYDRSSLSEFLANEGTVEAMVSMLTAQHLVMQNEALIALCILSV
VYLSQPSEAAQAQLLQDELVKCEVGKKLAELISKSSDTMTKEIVENLQNC
VNLLKSSEQLVAHLEQHNINELLKSIPILTEYCTL*

FI02061.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:51:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11753-PA 632 GF11753-PA 1..632 6..635 3075 94.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10781-PA 673 GG10781-PA 41..673 3..635 3242 97.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20393-PA 631 GH20393-PA 1..631 6..635 3010 92.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:24:17
Subject Length Description Subject Range Query Range Score Percent Strand
vimar-PC 635 CG3572-PC 1..635 1..635 3173 100 Plus
vimar-PB 634 CG3572-PB 1..634 1..635 3157 99.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20062-PA 571 GI20062-PA 3..571 68..635 2726 92.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10958-PA 639 GL10958-PA 1..639 1..635 3052 93.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:51:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24543-PA 639 GA24543-PA 1..639 1..635 3052 93.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:51:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20831-PA 761 GM20831-PA 127..761 1..635 3257 98.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:51:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10283-PA 579 GD10283-PA 6..579 5..585 2834 93.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:51:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14960-PA 631 GJ14960-PA 1..631 6..635 3000 91.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21536-PA 666 GK21536-PA 33..666 3..635 3027 92.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24302-PA 533 GE24302-PA 1..533 103..635 2750 98.9 Plus

FI02061.hyp Sequence

Translation from 291 to 2198

> FI02061.hyp
MATAEIDDLIEKLKTTSVSPANTTNLLCEISATKDPKLFDKHELAECFLG
LTKCDDTNVRKEAAKCIAEITKSEVQRKKFTKRNIIAAFLECLRQVPTSD
GSMELPIQICRALGNICYLNDEARDLILELEGDAVLLRLLDITTIEDVAN
AAQFIKVRGGLLSNYLLGGEGLAKRAMELGVMKKLQGIIDIGASNVEQHE
DLLLNTLPLLSILTENVSDLNFDSSLNIQLSRILAASTNPDLAEMCLELL
HYQAESDEVKLILAKDGLCETIYNLLEKYKTLASTSEARALMKLACELIV
LILTGDDSMHYLYTTPLLKNMVDWLDSTDIDLLTTGVLALGNFARTDSHC
IYFVEQQTMNKLLEVLAKNNGVKDDVRLQHALLSALRNLVIPKPNKNAVI
QAGLVQTILPMLEIHQPPVVFKLLGTLRMTVDGQEKLALELLKNKTLIEQ
LVHWSKSSDYAGVTGESLRLMAWLIKHAYLSKIAYALPRKGDAPAEQIAD
KIPLTQDYDRSSLSEFLANEGTVEAMVSMLTAQHLVMQNEALIALCILSV
VYLSQPSEAAQAQLLQDELVKCEVGKKLAELISKSSDTMTKEIVENLQNC
VNLLKSSEQLVAHLEQHNINELLKSIPILTEYCTL*

FI02061.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
vimar-PC 635 CG3572-PC 1..635 1..635 3173 100 Plus
vimar-PB 634 CG3572-PB 1..634 1..635 3157 99.8 Plus