Clone FI02069 Report

Search the DGRC for FI02069

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:20
Well:69
Vector:pFlc-1
Associated Gene/TranscriptCSN3-RA
Protein status:FI02069.pep: gold
Sequenced Size:1694

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CSN3 2008-08-15 Release 5.9 accounting
CSN3 2008-12-18 5.12 accounting

Clone Sequence Records

FI02069.complete Sequence

1694 bp assembled on 2008-08-11

GenBank Submission: BT044093.1

> FI02069.complete
ATTGTTTTATTCCCAGCTCTAATCCGTCGGCAGTCATTTGTTATTTCGCG
AAATTATTTTTCGCAGTTTTGCAAGTTAATAGGCCAAAAAGTAGTCTCGG
AGTTACCTAAAATGGGCAGCGCGCTGGAAAACTATGTGAATCAAGTGCGC
ACACTGAGTGCGTCCGGAAGCTATCGGGAGCTGGCCGAGGAGCTGCCGGA
GTCGCTGTCGCTGCTAGCCCGCAACTGGAGCATTCTGGACAACGTGCTGG
AGACGCTAGACATGCAGCAGCACTCGCTGGGCGTGCTCTATGTGCTCCTG
GCCAAACTGCACAGTGCGTCCACCGCGAATCCGGAGCCGGTACAACTTAT
CCAGCTGATGCGGGACTTTGTGCAGCGCAACAATAACGAGCAGCTGCGCT
ATGCGGTGTGCGCCTTTTACGAAACATGCCATCTGTTTACCGAGTTTGTG
GTGCAAAAGAACCTCAGCATCCTGGGCATACGCATCATTTCGCGCGCCAT
CGACCAGATTCGACAGTTGGAAACCCAGTTAACTCCCATACACGCCGATC
TCTGCCTGCTCAGCCTGAAGGCGAAAAACTTCAGTGTGGTGCTGCCGTAT
CTGGACGCGGACATCACGGACATCTCCACCGTGGCAGCCGAGTGCAAGAC
GCAACAGCAGCAGCAGTCCCAGCACGCGGATGCCAACAACGATGCCAAGT
ACTTCTTGCTGTACTTCTACTACGGCGGCATGATCTACACGGCGGTGAAG
AACTACGAGCGTGCGTTGTACTTCTTCGAAGTCTGCATCACCACTCCGGC
AATGGCCATGTCGCACATCATGCTGGAGGCCTACAAAAAATTTCTCATGG
TTTCACTCATCGTCGAAGGCAAGATAGCGTATATACCAAAAAACACACAG
GTCATTGGTCGTTTTATGAAGCCGATGGCCAATCACTACCACGACCTGGT
CAATGTGTACGCGAATTCGTCTAGCGAAGAGCTGCGCATTATCATACTCA
AGTACAGTGAAGCATTTACGCGTGATAACAATATGGGACTGGCCAAGCAG
GTGGCTACCTCCTTGTACAAGCGAAACATCCAGCGGCTCACTAAAACCTT
CTTGACCCTTTCCCTGAGCGATGTGGCCAGTCGTGTCCAACTTGCCAGCG
CAGTCGAAGCAGAGCGTTACATTCTCAACATGATAAAATCGGGTGAAATA
TATGCCAGCATCAATCAAAAGGACGGTATGGTGTTGTTCAAAGACGACCC
AGAGAAATACAACTCACCGGAGATGTTCCTCAACGTGCAAAATAATATAA
CACACGTTCTGGATCAAGTTAGGCAGATCAACAAAATGGAGGAGGAGATC
ATTTTAAATCCAATGTATGTGAAAAAGGCTCTTGGCAGCCAGGATGATGA
CCTAACGTCGCAGCACCCAAAGACTTTCTCGGGTGATCCCACAGATTGAT
GATACTACTGCCACAGAACCACCAGCAGCCTGCTGCTATCATTTCTACGC
TCATCCAATCCCCAACACCGTTTACCAGAACTTGTCGAAGCCGCGAGGCC
CTGGGCCCGAAAGCTGACGTCTCTTGCAGTCCGTACTCATTCAGCTACCA
CAACAACAAACTGCGCTCTTATTGCAAATTTAAAGATGAACATGCTATTT
TAAATAAACTATGTATAAATCTATGACTAAAAAAAAAAAAAAAA

FI02069.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:06:31
Subject Length Description Subject Range Query Range Score Percent Strand
CSN3.b 2125 CSN3.b 204..1880 4..1680 8370 99.9 Plus
CSN3-RA 1948 CSN3-RA 27..1703 4..1680 8370 99.9 Plus
CSN3.a 1730 CSN3.a 4..1433 4..1433 7150 100 Plus
CSN3.a 1730 CSN3.a 1433..1669 1444..1680 1170 99.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:39:33
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 20829746..20830009 679..416 1320 100 Minus
chr3L 24539361 chr3L 20830069..20830318 415..166 1250 100 Minus
chr3L 24539361 chr3L 20828117..20828362 1678..1433 1215 99.6 Minus
chr3L 24539361 chr3L 20829494..20829689 873..678 980 100 Minus
chr3L 24539361 chr3L 20828545..20828728 1365..1182 920 100 Minus
chr3L 24539361 chr3L 20829245..20829424 1051..872 900 100 Minus
chr3L 24539361 chr3L 20830430..20830593 167..4 820 100 Minus
chr3L 24539361 chr3L 20828783..20828920 1186..1049 675 99.3 Minus
chr3L 24539361 chr3L 20828419..20828487 1433..1365 345 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:07:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:39:31
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20840725..20840988 679..416 1320 100 Minus
3L 28110227 3L 20841048..20841297 415..166 1250 100 Minus
3L 28110227 3L 20839094..20839341 1680..1433 1225 99.6 Minus
3L 28110227 3L 20840473..20840668 873..678 980 100 Minus
3L 28110227 3L 20839524..20839707 1365..1182 920 100 Minus
3L 28110227 3L 20840224..20840403 1051..872 900 100 Minus
3L 28110227 3L 20841409..20841572 167..4 820 100 Minus
3L 28110227 3L 20839762..20839899 1186..1049 675 99.3 Minus
3L 28110227 3L 20839398..20839466 1433..1365 345 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:24:45
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 20833825..20834088 679..416 1320 100 Minus
3L 28103327 3L 20834148..20834397 415..166 1250 100 Minus
3L 28103327 3L 20832194..20832441 1680..1433 1225 99.5 Minus
3L 28103327 3L 20833573..20833768 873..678 980 100 Minus
3L 28103327 3L 20832624..20832807 1365..1182 920 100 Minus
3L 28103327 3L 20833324..20833503 1051..872 900 100 Minus
3L 28103327 3L 20834509..20834672 167..4 820 100 Minus
3L 28103327 3L 20832862..20832999 1186..1049 675 99.2 Minus
3L 28103327 3L 20832498..20832566 1433..1365 345 100 Minus
Blast to na_te.dros performed on 2019-03-15 18:39:31 has no hits.

FI02069.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:40:23 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 20828117..20828361 1434..1678 99 <- Minus
chr3L 20828419..20828486 1366..1433 100 <- Minus
chr3L 20828545..20828727 1183..1365 100 <- Minus
chr3L 20828787..20828918 1051..1182 100 <- Minus
chr3L 20829246..20829422 874..1050 100 <- Minus
chr3L 20829494..20829688 679..873 100 <- Minus
chr3L 20829747..20830009 416..678 100 <- Minus
chr3L 20830069..20830317 167..415 100 <- Minus
chr3L 20830431..20830596 1..166 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:39:48 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
CSN3-RA 1..1338 112..1449 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:09:28 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
CSN3-RA 1..1338 112..1449 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:26:28 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
CSN3-RA 1..1338 112..1449 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:09 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
CSN3-RA 1..1338 112..1449 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:56:11 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
CSN3-RA 1..1338 112..1449 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:48:43 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
CSN3-RA 1..1678 1..1678 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:09:28 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
CSN3-RA 1..1678 1..1678 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:26:28 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
CSN3-RA 2..1679 1..1678 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:29:33 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
CSN3-RA 1..1678 1..1678 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:56:11 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
CSN3-RA 2..1679 1..1678 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:23 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20839096..20839340 1434..1678 99 <- Minus
3L 20839398..20839465 1366..1433 100 <- Minus
3L 20839524..20839706 1183..1365 100 <- Minus
3L 20839766..20839897 1051..1182 100 <- Minus
3L 20840225..20840401 874..1050 100 <- Minus
3L 20840473..20840667 679..873 100 <- Minus
3L 20840726..20840988 416..678 100 <- Minus
3L 20841048..20841296 167..415 100 <- Minus
3L 20841410..20841575 1..166 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:23 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20839096..20839340 1434..1678 99 <- Minus
3L 20839398..20839465 1366..1433 100 <- Minus
3L 20839524..20839706 1183..1365 100 <- Minus
3L 20839766..20839897 1051..1182 100 <- Minus
3L 20840225..20840401 874..1050 100 <- Minus
3L 20840473..20840667 679..873 100 <- Minus
3L 20840726..20840988 416..678 100 <- Minus
3L 20841048..20841296 167..415 100 <- Minus
3L 20841410..20841575 1..166 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:23 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20839096..20839340 1434..1678 99 <- Minus
3L 20839398..20839465 1366..1433 100 <- Minus
3L 20839524..20839706 1183..1365 100 <- Minus
3L 20839766..20839897 1051..1182 100 <- Minus
3L 20840225..20840401 874..1050 100 <- Minus
3L 20840473..20840667 679..873 100 <- Minus
3L 20840726..20840988 416..678 100 <- Minus
3L 20841048..20841296 167..415 100 <- Minus
3L 20841410..20841575 1..166 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:26:28 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20832196..20832440 1434..1678 99 <- Minus
arm_3L 20832498..20832565 1366..1433 100 <- Minus
arm_3L 20832624..20832806 1183..1365 100 <- Minus
arm_3L 20832866..20832997 1051..1182 100 <- Minus
arm_3L 20833325..20833501 874..1050 100 <- Minus
arm_3L 20833573..20833767 679..873 100 <- Minus
arm_3L 20833826..20834088 416..678 100 <- Minus
arm_3L 20834148..20834396 167..415 100 <- Minus
arm_3L 20834510..20834675 1..166 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:39:21 Download gff for FI02069.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20832624..20832806 1183..1365 100 <- Minus
3L 20832866..20832997 1051..1182 100 <- Minus
3L 20833325..20833501 874..1050 100 <- Minus
3L 20834510..20834675 1..166 99   Minus
3L 20833573..20833767 679..873 100 <- Minus
3L 20832196..20832440 1434..1678 99 <- Minus
3L 20832498..20832565 1366..1433 100 <- Minus
3L 20833826..20834088 416..678 100 <- Minus
3L 20834148..20834396 167..415 100 <- Minus

FI02069.pep Sequence

Translation from 0 to 1448

> FI02069.pep
IVLFPALIRRQSFVISRNYFSQFCKLIGQKVVSELPKMGSALENYVNQVR
TLSASGSYRELAEELPESLSLLARNWSILDNVLETLDMQQHSLGVLYVLL
AKLHSASTANPEPVQLIQLMRDFVQRNNNEQLRYAVCAFYETCHLFTEFV
VQKNLSILGIRIISRAIDQIRQLETQLTPIHADLCLLSLKAKNFSVVLPY
LDADITDISTVAAECKTQQQQQSQHADANNDAKYFLLYFYYGGMIYTAVK
NYERALYFFEVCITTPAMAMSHIMLEAYKKFLMVSLIVEGKIAYIPKNTQ
VIGRFMKPMANHYHDLVNVYANSSSEELRIIILKYSEAFTRDNNMGLAKQ
VATSLYKRNIQRLTKTFLTLSLSDVASRVQLASAVEAERYILNMIKSGEI
YASINQKDGMVLFKDDPEKYNSPEMFLNVQNNITHVLDQVRQINKMEEEI
ILNPMYVKKALGSQDDDLTSQHPKTFSGDPTD*

FI02069.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:28:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10201-PA 445 GF10201-PA 1..445 38..482 2176 92.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:28:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13277-PA 445 GG13277-PA 1..445 38..482 2328 97.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:28:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15567-PA 450 GH15567-PA 1..450 38..482 1986 86 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:10
Subject Length Description Subject Range Query Range Score Percent Strand
CSN3-PA 445 CG18332-PA 1..445 38..482 2253 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:28:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16842-PA 446 GI16842-PA 1..446 38..482 2055 89 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:28:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26312-PA 445 GL26312-PA 1..445 38..482 2086 87.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:28:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14892-PA 445 GA14892-PA 1..445 38..482 2143 89 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:28:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22181-PA 445 GM22181-PA 1..445 38..482 2381 99.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:28:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12156-PA 445 GD12156-PA 1..445 38..482 2370 98.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:28:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12591-PA 446 GJ12591-PA 1..446 38..482 2055 89 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:28:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13507-PA 446 GK13507-PA 1..446 38..482 2025 88.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:28:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22374-PA 445 GE22374-PA 1..445 38..482 2353 98.2 Plus

FI02069.hyp Sequence

Translation from 0 to 1448

> FI02069.hyp
IVLFPALIRRQSFVISRNYFSQFCKLIGQKVVSELPKMGSALENYVNQVR
TLSASGSYRELAEELPESLSLLARNWSILDNVLETLDMQQHSLGVLYVLL
AKLHSASTANPEPVQLIQLMRDFVQRNNNEQLRYAVCAFYETCHLFTEFV
VQKNLSILGIRIISRAIDQIRQLETQLTPIHADLCLLSLKAKNFSVVLPY
LDADITDISTVAAECKTQQQQQSQHADANNDAKYFLLYFYYGGMIYTAVK
NYERALYFFEVCITTPAMAMSHIMLEAYKKFLMVSLIVEGKIAYIPKNTQ
VIGRFMKPMANHYHDLVNVYANSSSEELRIIILKYSEAFTRDNNMGLAKQ
VATSLYKRNIQRLTKTFLTLSLSDVASRVQLASAVEAERYILNMIKSGEI
YASINQKDGMVLFKDDPEKYNSPEMFLNVQNNITHVLDQVRQINKMEEEI
ILNPMYVKKALGSQDDDLTSQHPKTFSGDPTD*

FI02069.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:19:21
Subject Length Description Subject Range Query Range Score Percent Strand
CSN3-PA 445 CG18332-PA 1..445 38..482 2253 100 Plus