Clone FI02109 Report

Search the DGRC for FI02109

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:21
Well:9
Vector:pFlc-1
Associated Gene/TranscriptCG12702-RA
Protein status:FI02109.pep: gold
Sequenced Size:2972

Clone Sequence Records

FI02109.complete Sequence

2972 bp assembled on 2009-08-26

GenBank Submission: BT126386.1

> FI02109.complete
TTAGAATTTTCGAAATTATTTTCAGTTTGACGCTTGTTGTTTTTTTTTTC
TCTTGAAAGTCAAGTTCGAACGGATACGAACCGAATGGCTACGCTACGGA
ACCACCTATCGGCGGGCGGGGGGTTGAACCACAGCGGCCCGGACTCGCCA
CAGGAGCCGCAGGACGCGGGCGCCACGCTGGCCATCGGCTATGTGCGGGA
GTTCAGGATGCGCGTGGCCTGCTTCCAGGTGCAGCGCTCCGAGGAATCGC
TGGTGTACGTGCAGCGCAGCGTTGCGCTGCTAGGCACCAAGGTGCTGCCG
GCGCACTTTGCCCCCACGCCAGGCAACCTGGAGCTGGCCCGCTTCTATGT
GGATCTCTACGCGCTGATGGGCGCGCTGAAGAACGAGGGTGCCGAGGGCG
ATGTGCTGTGGGCCTGCGTTGGACTGGTGCAGCACTGCTCACGGAATCTG
GAGGCCCGCCAGGCGGTCGTCGAGCATTTCTGCTTTGTGCCGCTGCTGGG
AGTGCTCATAAGGCATACCAAACGAACGGAACGGGTGCACCGGCTGCTGG
TGCTGCTGCAGGACCTTACATACGGCATAAAAATCGCCTGGGAGGAGCCC
TTCCTGGCTGCGCTGATCGAGCATCTGGTGGGGATCGTACTGTGTACGGA
AGACGTCTCCTGCACTGCGAGTGGTGGGTCCGTTCGCGACGACGACGACG
AAAATACAATGCTCGCCCTCTCCGTGCTGGTGAACCTTTGCTACAAGAAC
TTCGCCGTGCTGTTCCTCTTTCTGCGCAGCGTCAACATATCCGCCTTTTG
CCGGCGCATCCAGAACTACGGCCTGCTGGCGTACAAAATGCTAATCATCC
TCTCGGAGGACGTCTACTCCTTCCAGCAGTCCGAGCTGTGCACCTTCCTG
CGCCTGTCGTTCGCCGGCATCGAGGACTGCCTGAAGCACTGGAACGTCGC
CCAGCTGCGGCATATCGTTGACTTCCTCTTGGACTCGCAGAGCCACCCCG
GCCTGCATAGGGCGATGTTGTCGCACGGCCATTTCTGTGAGGATTTCGAG
AAGCTGCTGGACCAAATCGACACTAGCAACGGCATGGACGTTTCGCAGGA
GGAGACGAGCAAGCACCAACAAATTTCGCTCGGACTGGTCTTCCGCCTCG
TCAGCTACATTCTGCAGATGTCCGAGGAAGCCAACAGCTGCATCAGCTTG
GACGCCATCACGCCGCGCTTGTATGAGATGGTCAGCGACTGGATGAGCTC
CGATCAATGCGGCGCGGCGGCTATTGAGCTGATCTGCACCCTGTTGCGCC
TGGGCAAACGTGCGGCGGTGGCCGAGATGATCGCCAACGATCCCTCTCAC
GTGGCCAAGTTGGTGGCCAGCGCCGAGCGACCGGACACGGATGCCGGTCA
AGTGTTAGCCACTCTGCGCCTGCTGATCGCCCTGCTTCAGGAGACGAAGA
CCAATAAAGTGGTGCTGTCCAAGATCTCCGAGTCGTACTTCGATAAGATC
CTGGCTGCTCCGCTCGCCCTCGTTCCCCAGTTTCTCAGCACACAGAGCCT
GGCGCAGTGCGAGGTGGAGAAAGCTTGCTTTTGCCTGCTGCTGCTCGTCA
ATGTCGCCGGCATCGCCAAGAAGGCCTATCTGGACAAGTGCTGCACACTG
CTGGAGCAGCCGCAGCTGCAGTACTGCTTAGCCCGCGGTATGGTCAGCAA
AAACGAGGCATTGGTGGCTGCCGTTCTACAAATTGCTCAGTTCGAGCATT
TTCCCAAGGCATCTGTAGCAAAGCATGTGTCTGCTATCACCTCTAGTCCA
GGTGGAATGATGACAAAGGCTTCAGCTGTCGGCAGCGACCAGGTCGAGCA
GTTGCGCAATCTAAGCTCGATCTTCAAGGCCAATCGCATTTTCACCGACA
AAGACATGGTCCAGCGGGTTAACGCACTTCTGGACAACATCGGCGGCATT
GTGAGCCGCAACGAACTGGCATCGGCACCCACCTCGCAGGTGATCGAGCT
GTACAACCACCGCATCGAGAGCCTGAACGGCACCGTGGCGAGCCTTCAGC
AGCGCCTGGAGCAGGCTGGCGAGCAGCTGACTATTGGTACACAGCAGGCC
CACGTGCAGAGCGCCGAGCTCGAACGCTTTCAGTCTAGCAACTTCCAGCT
GCTTATTAGCCAAGAACGGCTGCAGACCCGGTGCAAGGATCTCAAACAGC
AGAAGGTCGAACTGAAGAGCAATATGACAATCCTGCTCAAGCAATTGTCC
GAGAACTCCGTCCAATTGCAGGCCAACGAACGGCGATTAACCGTGAAAAA
GTCGGAGATTGCCGATCTTCAAAAGGACTGCGAGAATCTGCGATCGAAAC
TGAGTGCCAAAAGCGAGGAGCTCACTAAGCTGGAGGCTCACAACAAGGAG
AACATCTCTCGTATCGACAAACTCAAGAAGTCCATGGCGGCCTACGAGCA
GGACATGACGGAGAAGCTGCGCACCATCGGTGAGCGGGATCGGGAGCTGG
CCAAGACGCAAAAGGCTCTCGAGGAGCAGCGGGAGGCCTGCAAGAAGTCC
GAGGACCTGATTTCCGTGCTGGAGACGCAGCTGCAGGAGCGCAAGGCTCA
GATCGAGAGCCTCGAGATGGAACAGAAGGAGACGGAGGACTTGCGGAAGA
CGATCATGAGTCTGATGGAGAGCAAAAAGCCGAAGCGGAAGGCTTGATAC
TCAACTGCAACTCATTTTTAATATAGCTTAGACTAGTAGCATCTATCGAT
GAACTCCACTCCGCCGGCATCAAAACGTTATTTTTTTCATATTTATATAC
ATTTATTGCGTCTTGCACTGTATAATGCAATACATTATTGCCGTGCAAGG
TTCCATTCCAATTCCAATTCAACCAAAAATACAAAACATTTGAATAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAGAAAAAAAAAAAAAAAA

FI02109.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:33:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG12702.a 3306 CG12702.a 405..3299 3..2897 14475 100 Plus
CG12702-RA 3065 CG12702-RA 164..3058 3..2897 14475 100 Plus
CG12703.f 2487 CG12703.f 2368..2487 2897..2778 600 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:47:59
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 19649925..19650984 1062..3 5285 99.9 Minus
chrX 22417052 chrX 19649157..19649867 1773..1063 3540 99.9 Minus
chrX 22417052 chrX 19647839..19648333 2897..2404 2425 99.8 Minus
chrX 22417052 chrX 19648703..19649102 2169..1770 2000 100 Minus
chrX 22417052 chrX 19648401..19648636 2403..2168 1180 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:08:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:47:57
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19761256..19762315 1062..3 5300 100 Minus
X 23542271 X 19760488..19761198 1773..1063 3555 100 Minus
X 23542271 X 19759171..19759664 2897..2404 2470 100 Minus
X 23542271 X 19760034..19760433 2169..1770 2000 100 Minus
X 23542271 X 19759732..19759967 2403..2168 1180 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:50:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 19769354..19770413 1062..3 5300 100 Minus
X 23527363 X 19768586..19769296 1773..1063 3555 100 Minus
X 23527363 X 19767269..19767762 2897..2404 2470 100 Minus
X 23527363 X 19768132..19768531 2169..1770 2000 100 Minus
X 23527363 X 19767830..19768065 2403..2168 1180 100 Minus
Blast to na_te.dros performed 2019-03-16 08:47:57
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy10 6006 gypsy10 GYPSY10 6006bp 710..785 2862..2938 148 67.5 Plus

FI02109.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:49:00 Download gff for FI02109.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 19647841..19648333 2404..2895 99 <- Minus
chrX 19648401..19648635 2169..2403 100 <- Minus
chrX 19648704..19649098 1774..2168 100 <- Minus
chrX 19649157..19649867 1063..1773 99 <- Minus
chrX 19649925..19650984 1..1062 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:14:48 Download gff for FI02109.complete
Subject Subject Range Query Range Percent Splice Strand
CG12702-RA 1..2613 85..2697 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:51:36 Download gff for FI02109.complete
Subject Subject Range Query Range Percent Splice Strand
CG12702-RA 1..2613 85..2697 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:34:55 Download gff for FI02109.complete
Subject Subject Range Query Range Percent Splice Strand
CG12702-RA 1..2613 85..2697 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:51:01 Download gff for FI02109.complete
Subject Subject Range Query Range Percent Splice Strand
CG12702-RA 1..2613 85..2697 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 16:20:08 Download gff for FI02109.complete
Subject Subject Range Query Range Percent Splice Strand
CG12702-RA 6..2901 1..2895 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:51:36 Download gff for FI02109.complete
Subject Subject Range Query Range Percent Splice Strand
CG12702-RA 6..2901 1..2895 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:34:55 Download gff for FI02109.complete
Subject Subject Range Query Range Percent Splice Strand
CG12702-RA 1..2896 2..2895 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:51:01 Download gff for FI02109.complete
Subject Subject Range Query Range Percent Splice Strand
CG12702-RA 1..2896 2..2895 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:49:00 Download gff for FI02109.complete
Subject Subject Range Query Range Percent Splice Strand
X 19759173..19759664 2404..2895 100 <- Minus
X 19759732..19759966 2169..2403 100 <- Minus
X 19760035..19760429 1774..2168 100 <- Minus
X 19760488..19761198 1063..1773 100 <- Minus
X 19761256..19762315 1..1062 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:49:00 Download gff for FI02109.complete
Subject Subject Range Query Range Percent Splice Strand
X 19759173..19759664 2404..2895 100 <- Minus
X 19759732..19759966 2169..2403 100 <- Minus
X 19760035..19760429 1774..2168 100 <- Minus
X 19760488..19761198 1063..1773 100 <- Minus
X 19761256..19762315 1..1062 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:49:00 Download gff for FI02109.complete
Subject Subject Range Query Range Percent Splice Strand
X 19759173..19759664 2404..2895 100 <- Minus
X 19759732..19759966 2169..2403 100 <- Minus
X 19760035..19760429 1774..2168 100 <- Minus
X 19760488..19761198 1063..1773 100 <- Minus
X 19761256..19762315 1..1062 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:34:55 Download gff for FI02109.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19653206..19653697 2404..2895 100 <- Minus
arm_X 19653765..19653999 2169..2403 100 <- Minus
arm_X 19654068..19654462 1774..2168 100 <- Minus
arm_X 19654521..19655231 1063..1773 100 <- Minus
arm_X 19655289..19656348 1..1062 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:27:41 Download gff for FI02109.complete
Subject Subject Range Query Range Percent Splice Strand
X 19767271..19767762 2404..2895 100 <- Minus
X 19767830..19768064 2169..2403 100 <- Minus
X 19768133..19768527 1774..2168 100 <- Minus
X 19768586..19769296 1063..1773 100 <- Minus
X 19769354..19770413 1..1062 99   Minus

FI02109.pep Sequence

Translation from 84 to 2696

> FI02109.pep
MATLRNHLSAGGGLNHSGPDSPQEPQDAGATLAIGYVREFRMRVACFQVQ
RSEESLVYVQRSVALLGTKVLPAHFAPTPGNLELARFYVDLYALMGALKN
EGAEGDVLWACVGLVQHCSRNLEARQAVVEHFCFVPLLGVLIRHTKRTER
VHRLLVLLQDLTYGIKIAWEEPFLAALIEHLVGIVLCTEDVSCTASGGSV
RDDDDENTMLALSVLVNLCYKNFAVLFLFLRSVNISAFCRRIQNYGLLAY
KMLIILSEDVYSFQQSELCTFLRLSFAGIEDCLKHWNVAQLRHIVDFLLD
SQSHPGLHRAMLSHGHFCEDFEKLLDQIDTSNGMDVSQEETSKHQQISLG
LVFRLVSYILQMSEEANSCISLDAITPRLYEMVSDWMSSDQCGAAAIELI
CTLLRLGKRAAVAEMIANDPSHVAKLVASAERPDTDAGQVLATLRLLIAL
LQETKTNKVVLSKISESYFDKILAAPLALVPQFLSTQSLAQCEVEKACFC
LLLLVNVAGIAKKAYLDKCCTLLEQPQLQYCLARGMVSKNEALVAAVLQI
AQFEHFPKASVAKHVSAITSSPGGMMTKASAVGSDQVEQLRNLSSIFKAN
RIFTDKDMVQRVNALLDNIGGIVSRNELASAPTSQVIELYNHRIESLNGT
VASLQQRLEQAGEQLTIGTQQAHVQSAELERFQSSNFQLLISQERLQTRC
KDLKQQKVELKSNMTILLKQLSENSVQLQANERRLTVKKSEIADLQKDCE
NLRSKLSAKSEELTKLEAHNKENISRIDKLKKSMAAYEQDMTEKLRTIGE
RDRELAKTQKALEEQREACKKSEDLISVLETQLQERKAQIESLEMEQKET
EDLRKTIMSLMESKKPKRKA*

FI02109.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:41:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20464-PA 873 GF20464-PA 1..872 1..870 3326 75.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:41:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18024-PA 870 GG18024-PA 1..870 1..870 3954 85.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:41:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24492-PA 871 GH24492-PA 31..870 20..869 2666 63.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:24:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG12702-PB 870 CG12702-PB 1..870 1..870 4362 100 Plus
CG12702-PC 870 CG12702-PC 1..870 1..870 4362 100 Plus
CG12702-PA 870 CG12702-PA 1..870 1..870 4362 100 Plus
Gmap-PC 1208 CG33206-PC 517..742 635..864 191 23.6 Plus
Gmap-PB 1208 CG33206-PB 517..742 635..864 191 23.6 Plus
Gmap-PA 1398 CG33206-PA 707..932 635..864 191 23.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:41:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15247-PA 872 GI15247-PA 41..872 26..870 2787 66.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:41:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12931-PA 873 GL12931-PA 1..872 1..869 2943 65.9 Plus
Dper\GL12111-PA 892 GL12111-PA 44..891 9..869 2721 62.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:41:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11764-PA 873 GA11764-PA 1..872 1..869 2945 66.1 Plus
Dpse\GA26196-PA 877 GA26196-PA 1..876 1..869 2819 63.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:41:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22707-PA 870 GM22707-PA 1..870 1..870 4186 91.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:41:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15566-PA 870 GD15566-PA 1..870 1..870 4121 89.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:41:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14819-PA 873 GJ14819-PA 32..873 20..870 2823 66.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:41:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25769-PA 867 GK25769-PA 1..867 1..870 2673 60.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:41:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13456-PA 873 GE13456-PA 1..873 1..870 3881 86.9 Plus

FI02109.hyp Sequence

Translation from 84 to 2696

> FI02109.hyp
MATLRNHLSAGGGLNHSGPDSPQEPQDAGATLAIGYVREFRMRVACFQVQ
RSEESLVYVQRSVALLGTKVLPAHFAPTPGNLELARFYVDLYALMGALKN
EGAEGDVLWACVGLVQHCSRNLEARQAVVEHFCFVPLLGVLIRHTKRTER
VHRLLVLLQDLTYGIKIAWEEPFLAALIEHLVGIVLCTEDVSCTASGGSV
RDDDDENTMLALSVLVNLCYKNFAVLFLFLRSVNISAFCRRIQNYGLLAY
KMLIILSEDVYSFQQSELCTFLRLSFAGIEDCLKHWNVAQLRHIVDFLLD
SQSHPGLHRAMLSHGHFCEDFEKLLDQIDTSNGMDVSQEETSKHQQISLG
LVFRLVSYILQMSEEANSCISLDAITPRLYEMVSDWMSSDQCGAAAIELI
CTLLRLGKRAAVAEMIANDPSHVAKLVASAERPDTDAGQVLATLRLLIAL
LQETKTNKVVLSKISESYFDKILAAPLALVPQFLSTQSLAQCEVEKACFC
LLLLVNVAGIAKKAYLDKCCTLLEQPQLQYCLARGMVSKNEALVAAVLQI
AQFEHFPKASVAKHVSAITSSPGGMMTKASAVGSDQVEQLRNLSSIFKAN
RIFTDKDMVQRVNALLDNIGGIVSRNELASAPTSQVIELYNHRIESLNGT
VASLQQRLEQAGEQLTIGTQQAHVQSAELERFQSSNFQLLISQERLQTRC
KDLKQQKVELKSNMTILLKQLSENSVQLQANERRLTVKKSEIADLQKDCE
NLRSKLSAKSEELTKLEAHNKENISRIDKLKKSMAAYEQDMTEKLRTIGE
RDRELAKTQKALEEQREACKKSEDLISVLETQLQERKAQIESLEMEQKET
EDLRKTIMSLMESKKPKRKA*

FI02109.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG12702-PB 870 CG12702-PB 1..870 1..870 4362 100 Plus
CG12702-PC 870 CG12702-PC 1..870 1..870 4362 100 Plus
CG12702-PA 870 CG12702-PA 1..870 1..870 4362 100 Plus
Gmap-PC 1208 CG33206-PC 517..742 635..864 191 23.6 Plus
Gmap-PB 1208 CG33206-PB 517..742 635..864 191 23.6 Plus