Clone FI02136 Report

Search the DGRC for FI02136

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:21
Well:36
Vector:pFlc-1
Associated Gene/TranscriptRpn2-RA
Protein status:FI02136.pep: gold
Sequenced Size:3367

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Rpn2 2008-12-18 5.12 accounting

Clone Sequence Records

FI02136.complete Sequence

3367 bp assembled on 2008-09-24

GenBank Submission: BT044102.1

> FI02136.complete
AGCGAGCAACCAACCATTACCAACACTGTCTGCTTACCGAGTGATTTAGC
ATTTTTTCGGCACAAAAGAAAACTGAAAATTAAAACGGTGCAATTGTTGA
ACATATTTTTGACTGGAAACAACGCAGCTGGAAAATGAGTCTTACGTCCG
CCGCGGGGATAATTTCCCTACTCGATGAGCCAATGCCGGATCTTAAGGTG
TTCGCCCTCAAAAAGCTGGACAACATCGTGGATGAGTTCTGGCCGGAGAT
CTCGGAGTCCATCGAGAAGATCGAGATGCTGCACGAGGATCGCAGCTTCC
CCGAAAACAAGCTAGCTGGCATGGTGGCCTCCAAGGTGTTCTATCACCTG
GGCTCCTTCGAGGACGCTCTGACGTACGCCCTGGGCGCTGGTGATCTGTT
CGACGTGAATGCCCGCAATGAGTACACGGAGACCATCATTGCCAAGTGCA
TCGACTTCTACATTGCCCAGCGGGTGGAGTTCATCGAGAACCCTAAGGAG
GCGAGTGTCGTGGACGAGCGGCTGGAGGGCATTGTGAACAGGATGATTCA
GCGCTGTCTGGACGACAACCAGTTCCGCCAGGCTCTGGGCATCGCTCTGG
AGACCCGTCGCATGGACACCTTCAAGGACGCTATCATGAAGTCGGACGAT
GTGCGTGGCATGCTGGCCTACGCCTACAACGTGACCATGTCCCTCATCCA
GAACCGTGGCTTCCGCAATGAGGTGCTGCGCTGTCTGGTCAGTCTGTACC
GTGATCTGGGTGTGCCGGACTACGTGAATATGTGTCAGTGCCTCATCTTC
CTGGAGGACCCCTTCGCCGTAGCCGAGATGCTGGACAACCTCACACGGTC
CTCGGTGGAGACAAACAATCTGATGGCCTATCAGATTGCCTTTGATTTGT
ACGAGTCGGCCACGCAAGAGTTTCTGGGCAATGTGCTGCAGCACCTCAAA
AACACCGCTCCTATCCCAACCGCCCTCCCCAGCACATTTAAGCCCCAGGG
TACCACCTCCGAGGATGGTGCCAAGTCGGAGGGAGACAAGTCCAAGTCTG
ACGAGGATATCACAGAGGAGACGCCAGCTGATGATAAAGTAGAGCGCACA
ATCGATTCCCTTAACGAGGTTGAAAAGTTGCATCAGAAGAACATTGAAAA
GCTCATATCGATCCTCTCCGGCGAGGTTTCCATCGACCTACAGCTCCAAT
TCCTCATCCGCAGCAACCACGCCGATTTGCAGGTCCTTCGAGGCACAAAG
GAAGCGGTCCGCGTGTCTATCTGCCACACAGCCACTGTTATTGCCAACGC
CTTCATGCACAGCGGCACCACCTCCGACCAATTCCTGCGCGACAACCTCG
ACTGGCTGGCCAGGGCCACGAATTGGGCCAAGCTGACGGCAACCGCTTCG
CTTGGAGTAATTCATCGGGGTCACGAGAAGGATTCCCTGGCTCTCATGCA
GAGCTATCTGCCAAAGGAGGCCGGTCCAAGTTCTGGTTACTCTGAGGGTG
GTGCCCTTTATGCTTTGGGCTTGATCCATGCGAATCACGGAGCTAACATT
ATAGACTACCTGCTGCAACAGCTGAAGGATGCCCAAAACGAGAATGTGCG
TCATGGCGGCTGCCTGGGACTAGGTCTCGCTGGCATGGGCACCCATCGCC
AGGATCTGTATGAGCAGCTGAAGTTTAATTTGTATCAGGATGACGCGGTT
ACCGGAGAGGCGGCGGGCATTGCCATGGGTATGGTCATGCTGGGCTCCAA
GAACGCCCAGGCCATCGAGGACATGGTGTCGTATGCGCAGGAGACGCAGC
ACGAGAAGATCCTACGCGGCCTAGCCGTGGGCATCTCCCTCACAATGTTC
TCTCGTTTGGAGGAGGCCGACCCCCTGGTGACCAGCCTGTCTTCCGACAA
GGATCCTGTGTTGCGCCGCTCGGGAATGTACACCATAGCTATGGCCTACA
ATGGTACTGGTAGCAACAAGGCCATCCGCAAGCTGCTACACGTGGCCGTC
TCCGACGTAAATGATGATGTGCGACGTGCTGCTGTGACAGCCATCGGCTT
CATCCTGTTCCGCTCTCCGGAGCAGTGTCCCTCTGTGGTCAGCCTTCTGG
CAGAGTCCTACAACCCGCACGTTCGTTACGGAGCCGCAATGGCTCTTGGT
ATCGCCTGTGCCGGCACAGGTTTGCGTGAGGCCATTGCCCTGCTGGAGCC
AATGGTGAAGTTCGATCCGGTCAACTTTGTGCGCCAGGGAGCTTTGATCG
CCTCTGCCATGATCCTGATTCAGCACACGGACCAGAGCTGTCCCAAGTCC
ACCTTCTTCCGTCAGCTGTACGCCGAGGTCATTAGCAACAAGCACGAAGA
TGTGATGGCGAAGTACGGTGCCATTTTGGCTCAGGGTATTATTGATGCTG
GTGGCCGAAACGCTACTCTGTCCCTGCAGTCCCGTACAGGACACACCAAC
CTGCAGGCAGTGGTGGGCATGCTGGCTTTCACCCAGTACTGGTACTGGTT
CCCCCTGGCCCACACCCTTTCCCTTGCCTTCACACCCACCTGTGTGATCG
GCCTGAACTCCGATCTGAAAATGCCCAAGATGGAGTACAAGTCGGCGGCC
AAGCCCTCGTTATACGCATATCCCGCCCCACTGGAGGAGAAGAAGAGCGA
GGAGCGCGAGAAGGTGGCCACCGCAGTTCTGTCCATTGCCGCCCGCCAGA
AGAGACGCGAGAATGCCGACAAAAAAGAGGATGAGAAGATGGATGTGGAC
GAGGACAGCAAGGAGGGTGCTGCTGTCAAGAAGGACGAAGAAGCCAAGGC
CGATGAGAAGATGGTAACGGATGAGAAACCCAAGAAGAAGGATGAGAAGG
AAAAGAAAAAGGAAGAGGATAAGGAAAAGGAGGCAGCTGGCACCAGCAGC
GAAAAGGATAAGGATAAGGAGAAGGACAAGAAGGAGAAGAAGGAGCCAGA
GCCGACCTCCGAAATCCTGCAGAATCCCGCGCGCGTTCTTCGCCAGCAAC
TGAAGGTCCTTAGCGTTATTGATGGCCAGTCGTATGAGCCGCTGAAGGAT
GTCACTATCGGTGGAATTATTGTATTCCAGCACACTGGCAAAGCAGAGGA
CCAGGAGCTCGTTGAGCCAGTTGCCGCATTTGGACCGATGAACGACGAGG
AAAAGGAGCCGGAGCCCCCAGAGCCCTTTGAGTACATCGAGGACTAAATG
GGCATGCTGTTTGTCATTATCTAAGTGAATCCTGTTCGATTTTCAACCTT
GCTTACGTTTCATGAGAACAACTAATCGGCAAGAACACGAAATGCTAATC
CCTAATTATAACACAATAAATGGTCATCATATTAGATGTAAAAAAAAAAA
AAGAAAAAAAAAAAAAA

FI02136.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:00:29
Subject Length Description Subject Range Query Range Score Percent Strand
Rpn2-RA 3510 Rpn2-RA 71..3410 3..3342 16685 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:49:42
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 24977605..24978917 1076..2388 6550 99.9 Plus
chr3R 27901430 chr3R 24976566..24977544 99..1077 4895 100 Plus
chr3R 27901430 chr3R 24979172..24980129 2385..3342 4760 99.8 Plus
chr3R 27901430 chr3R 24976383..24976479 3..99 485 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:08:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:49:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29154734..29156046 1076..2388 6565 100 Plus
3R 32079331 3R 29153695..29154673 99..1077 4895 100 Plus
3R 32079331 3R 29156301..29157258 2385..3342 4775 99.9 Plus
3R 32079331 3R 29153512..29153608 3..99 485 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 28895565..28896877 1076..2388 6565 100 Plus
3R 31820162 3R 28894526..28895504 99..1077 4895 100 Plus
3R 31820162 3R 28897132..28898089 2385..3342 4775 99.8 Plus
3R 31820162 3R 28894343..28894439 3..99 485 100 Plus
Blast to na_te.dros performed on 2019-03-15 20:49:40 has no hits.

FI02136.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:50:41 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 24976381..24976479 1..99 98 -> Plus
chr3R 24976567..24977544 100..1077 100 -> Plus
chr3R 24977607..24978914 1078..2385 99 -> Plus
chr3R 24979173..24979619 2386..2832 100 == Plus
chr3R 24979733..24980126 2946..3339 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:40:06 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
Rpn2-RA 1..3063 135..3197 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:00:24 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
Rpn2-RA 1..3063 135..3197 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:24:23 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
Rpn2-RB 1..3090 135..3224 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:17:59 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
Rpn2-RA 1..3063 135..3197 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:31:36 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
Rpn2-RB 1..3090 135..3224 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:17:48 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
Rpn2-RA 48..3386 1..3339 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:00:24 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
Rpn2-RA 48..3386 1..3339 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:24:23 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
Rpn2-RA 1..3325 15..3339 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 18:41:44 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
Rpn2-RA 48..3386 1..3339 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:31:36 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
Rpn2-RA 1..3325 15..3339 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:50:41 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29153510..29153608 1..99 98 -> Plus
3R 29153696..29154673 100..1077 100 -> Plus
3R 29154736..29156043 1078..2385 100 -> Plus
3R 29156302..29157255 2386..3339 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:50:41 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29153510..29153608 1..99 98 -> Plus
3R 29153696..29154673 100..1077 100 -> Plus
3R 29154736..29156043 1078..2385 100 -> Plus
3R 29156302..29157255 2386..3339 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:50:41 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29153510..29153608 1..99 98 -> Plus
3R 29153696..29154673 100..1077 100 -> Plus
3R 29154736..29156043 1078..2385 100 -> Plus
3R 29156302..29157255 2386..3339 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:24:23 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24979232..24979330 1..99 98 -> Plus
arm_3R 24979418..24980395 100..1077 100 -> Plus
arm_3R 24980458..24981765 1078..2385 100 -> Plus
arm_3R 24982024..24982977 2386..3339 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:27:24 Download gff for FI02136.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28894527..28895504 100..1077 100 -> Plus
3R 28895567..28896874 1078..2385 100 -> Plus
3R 28897133..28898086 2386..3339 99   Plus
3R 28894341..28894439 1..99 98 -> Plus

FI02136.pep Sequence

Translation from 134 to 3196

> FI02136.pep
MSLTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLH
EDRSFPENKLAGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTET
IIAKCIDFYIAQRVEFIENPKEASVVDERLEGIVNRMIQRCLDDNQFRQA
LGIALETRRMDTFKDAIMKSDDVRGMLAYAYNVTMSLIQNRGFRNEVLRC
LVSLYRDLGVPDYVNMCQCLIFLEDPFAVAEMLDNLTRSSVETNNLMAYQ
IAFDLYESATQEFLGNVLQHLKNTAPIPTALPSTFKPQGTTSEDGAKSEG
DKSKSDEDITEETPADDKVERTIDSLNEVEKLHQKNIEKLISILSGEVSI
DLQLQFLIRSNHADLQVLRGTKEAVRVSICHTATVIANAFMHSGTTSDQF
LRDNLDWLARATNWAKLTATASLGVIHRGHEKDSLALMQSYLPKEAGPSS
GYSEGGALYALGLIHANHGANIIDYLLQQLKDAQNENVRHGGCLGLGLAG
MGTHRQDLYEQLKFNLYQDDAVTGEAAGIAMGMVMLGSKNAQAIEDMVSY
AQETQHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKDPVLRRSGMYT
IAMAYNGTGSNKAIRKLLHVAVSDVNDDVRRAAVTAIGFILFRSPEQCPS
VVSLLAESYNPHVRYGAAMALGIACAGTGLREAIALLEPMVKFDPVNFVR
QGALIASAMILIQHTDQSCPKSTFFRQLYAEVISNKHEDVMAKYGAILAQ
GIIDAGGRNATLSLQSRTGHTNLQAVVGMLAFTQYWYWFPLAHTLSLAFT
PTCVIGLNSDLKMPKMEYKSAAKPSLYAYPAPLEEKKSEEREKVATAVLS
IAARQKRRENADKKEDEKMDVDEDSKEGAAVKKDEEAKADEKMVTDEKPK
KKDEKEKKKEEDKEKEAAGTSSEKDKDKEKDKKEKKEPEPTSEILQNPAR
VLRQQLKVLSVIDGQSYEPLKDVTIGGIIVFQHTGKAEDQELVEPVAAFG
PMNDEEKEPEPPEPFEYIED*

FI02136.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:03:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16602-PA 1023 GF16602-PA 1..1007 1..1004 4709 93 Plus
Dana\GF23601-PA 923 GF23601-PA 373..621 383..621 158 28.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:03:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11649-PA 1016 GG11649-PA 1..1016 1..1020 5367 98.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:03:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14298-PA 1038 GH14298-PA 1..1023 1..1005 4616 89.9 Plus
Dgri\GH23222-PA 332 GH23222-PA 1..326 1..326 1490 85.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:11:19
Subject Length Description Subject Range Query Range Score Percent Strand
Rpn2-PC 1020 CG11888-PC 1..1020 1..1020 5193 100 Plus
Rpn2-PB 1029 CG11888-PB 1..1020 1..1020 5193 100 Plus
Rpn2-PA 1020 CG11888-PA 1..1020 1..1020 5193 100 Plus
Rpn1-PA 919 CG7762-PA 325..616 333..620 187 25.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:03:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10395-PA 1030 GI10395-PA 1..1015 1..1005 4615 89.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:03:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13666-PA 520 GL13666-PA 1..520 1..519 2520 94.2 Plus
Dper\GL13667-PA 488 GL13667-PA 1..472 531..1004 1974 85.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26985-PA 1030 GA26985-PA 1..1014 1..1004 4696 92 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12772-PA 1018 GM12772-PA 1..1018 1..1020 5431 99.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:03:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21420-PA 429 GD21420-PA 112..429 701..1020 1653 98.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:03:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14509-PA 1033 GJ14509-PA 1..1018 1..1005 4627 91.4 Plus
Dvir\GJ11331-PA 913 GJ11331-PA 365..611 383..621 158 28.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:03:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22666-PA 1036 GK22666-PA 1..1021 1..1005 4673 90.4 Plus
Dwil\GK22665-PA 178 GK22665-PA 1..144 1..144 730 95.1 Plus
Dwil\GK20267-PA 159 GK20267-PA 77..151 938..1012 333 94.7 Plus
Dwil\GK16700-PA 921 GK16700-PA 372..619 383..621 169 29.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:03:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23840-PA 1018 GE23840-PA 1..1018 1..1020 5396 98.5 Plus
Dyak\GE19634-PA 919 GE19634-PA 369..617 383..621 160 28.8 Plus

FI02136.hyp Sequence

Translation from 134 to 3196

> FI02136.hyp
MSLTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLH
EDRSFPENKLAGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTET
IIAKCIDFYIAQRVEFIENPKEASVVDERLEGIVNRMIQRCLDDNQFRQA
LGIALETRRMDTFKDAIMKSDDVRGMLAYAYNVTMSLIQNRGFRNEVLRC
LVSLYRDLGVPDYVNMCQCLIFLEDPFAVAEMLDNLTRSSVETNNLMAYQ
IAFDLYESATQEFLGNVLQHLKNTAPIPTALPSTFKPQGTTSEDGAKSEG
DKSKSDEDITEETPADDKVERTIDSLNEVEKLHQKNIEKLISILSGEVSI
DLQLQFLIRSNHADLQVLRGTKEAVRVSICHTATVIANAFMHSGTTSDQF
LRDNLDWLARATNWAKLTATASLGVIHRGHEKDSLALMQSYLPKEAGPSS
GYSEGGALYALGLIHANHGANIIDYLLQQLKDAQNENVRHGGCLGLGLAG
MGTHRQDLYEQLKFNLYQDDAVTGEAAGIAMGMVMLGSKNAQAIEDMVSY
AQETQHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKDPVLRRSGMYT
IAMAYNGTGSNKAIRKLLHVAVSDVNDDVRRAAVTAIGFILFRSPEQCPS
VVSLLAESYNPHVRYGAAMALGIACAGTGLREAIALLEPMVKFDPVNFVR
QGALIASAMILIQHTDQSCPKSTFFRQLYAEVISNKHEDVMAKYGAILAQ
GIIDAGGRNATLSLQSRTGHTNLQAVVGMLAFTQYWYWFPLAHTLSLAFT
PTCVIGLNSDLKMPKMEYKSAAKPSLYAYPAPLEEKKSEEREKVATAVLS
IAARQKRRENADKKEDEKMDVDEDSKEGAAVKKDEEAKADEKMVTDEKPK
KKDEKEKKKEEDKEKEAAGTSSEKDKDKEKDKKEKKEPEPTSEILQNPAR
VLRQQLKVLSVIDGQSYEPLKDVTIGGIIVFQHTGKAEDQELVEPVAAFG
PMNDEEKEPEPPEPFEYIED*

FI02136.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:20:52
Subject Length Description Subject Range Query Range Score Percent Strand
Rpn2-PC 1020 CG11888-PC 1..1020 1..1020 5193 100 Plus
Rpn2-PB 1029 CG11888-PB 1..1020 1..1020 5193 100 Plus
Rpn2-PA 1020 CG11888-PA 1..1020 1..1020 5193 100 Plus
Rpn1-PA 919 CG7762-PA 325..616 333..620 187 25.2 Plus