BDGP Sequence Production Resources |
Search the DGRC for FI02176
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 21 |
Well: | 76 |
Vector: | pFlc-1 |
Associated Gene/Transcript | NT1-RB |
Protein status: | FI02176.pep: gold |
Sequenced Size: | 2024 |
2024 bp assembled on 2010-01-25
GenBank Submission: BT120208.1
> FI02176.complete AGTTTGCGGCGAGTGTTGAAAGCGTTCAGACGTAGCAGGCGGAAAAAATA AAAAGCTGTCTCAAAAGCAAAACGAAGGTGAATGCCAAGCGGACAGACTC AAGAAGTGTGGCAAAGTAGAAATTTCTGTTAATTAAGGCGCGTGTGAAAA GTGTGAAAATCAGCGAAGGCGGTAGCCAATGAGCCTATAAAAGTGAAAAT TATCTATGCAAAGTGGAGTGGAATGGAAACTCGGTCCTTGCGCCGCAACA GGAAATAAACAGTGATCAAGCTAAATACATATATCGAAGCTCGGAAGACT GGAGAAGGGAGTGGCTTGGAGAACAAAAAAAAAAAGAAGAACAGTGGACT GAAGACAAGCTGATCTGAGGTGATTTCTGAAGCTCTGCTTTAGCTTTATA AATTAATCATAAAAAACTAGAGCGCAAAGCGGAGAACAAGAAACAAAATC GAAATTGGAATTTTAAAATAGCATTTCATTTACGACTGCAATTAAAAACA AAGCCAAGAAAATAAAGCCAGAGTGAAAATGAAAGCTGGCCGCGCCTTCG GCTGCCTTTTCTGGGCTCTGCTCTATTGTGTGCTCTATCTGGATCTGGTC AGTGGGAACTCCGCCGACGATGAGCTGATGGACTTTGATTTTGCGGATTC AAATGATGCTGCTATGGAGGACTGGCAGCTGGATGATCTGGAGGAGGCAA AAAAGGCGGAGCAGGCCGAAAAGAAGTTGGAGTCGAATATGCTGGACTTT AGCGTAGATCTGGATGAACCGGAGCCGGAGAAACAATTACCACCTTTCGA TTGGCGAGAAAGGGTTTTAAGAAACGCTCTGGCCAAAGCCTTGGCGGATG AGGGATTGCGCCAGAAGTTCGCCGAAGTTTTGCCCATTTTAAGAATGCTA TCTTCTCAACAGCGCCTGGCTCTTTCCGCTTTGATCTCGGCTCAGATGAA TGCAAAAAAGGGGCACGAACTAAAGTTTGAACAGGTTCGCATGATGTTTG GCAATGAAAAAAAGCTGCTTTTGCCCATAGTGTTCGACATCGCAAATCTC ATAAAGAGCTCTACCCGCAAGTACATCAATCTGGGTTCTGATCTGGCTTC ATCTGCCCTTTACCATACTCCCATCAATCGTCGTGAAGATGATTTGACTC CAGAAGAGTCCCAACAGGATGACCAATTGGGCACCATTGCTGTGGAAGTT GAGCCAAAAAAGGTCTCTACTGAGGAGGTGCAATTGGAGTCTCTAGAGGA CTTCTTTGATGAGATGGGGTCAGAAGTGCTTGATCCTCAGATGATCAATG AGGCCCTGACAGGTGATCTTCATGATAACAAAACCAAGACTTTTAAACCA GAAAATCATGGTCAAAGAGTTCGACGATCGGCAAACGAGTTTGTTCACAA ATTGACCCGATCCGTGCCTGCTTCTGTGACCGAGCAGCAACTTTTGGGTG GCATTGCTGGACGTACCATCAAGCTGAATACCACAGCTTTTCAACAGCCA AGTAGCCAGGAGGAGGAGAAGATGGCCTCCTCCAATGGTGGCCAGTCATA CTCTGAGGTGGAGGATCTGGCTTTTGCTGGTCTTAATGGCACGGAAATCC CCCTGAGCGCTGATGAGCGATTAGATCTGCAAAGAAACAGCGCCGAGGAG ACTGAGGAACCACTACCAAGTCCAGAGGAACTCATCGCTGGACCACGTTA CCGACTGGGGAAAAGACCACTGCCTGGTCAAAAATCTGGATCTCCCATCA AACGAAAGAGAGTCACATCCTCCTTAAGGGGAAGACCGAAGACCGCCGCC AGTTCCCATAAACCCGTGGTTACACCACCCAACAAGAAATGCGAACGATT CACCAGCAACATGTGCATCCGAACCGACGACTATCCGCTGTAAGATTCCC GTAGCTAGTTGGTGAGCGGTACTCCCAGGGTCCTGGTTCCGGTCCATAGT CCTTAGCTCTAGTTTAGTCCGAATTTTAGCCATAATAAAACTTTAATTTA TGAATCACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spz2-RB | 2008 | spz2-RB | 1..2008 | 1..2008 | 10025 | 99.9 | Plus |
spz2-RE | 1907 | spz2-RE | 379..1906 | 482..2009 | 7640 | 100 | Plus |
spz2-RF | 3869 | spz2-RF | 370..1777 | 482..1889 | 7040 | 100 | Plus |
spz2-RE | 1907 | spz2-RE | 10..378 | 1..369 | 1830 | 99.7 | Plus |
spz2-RF | 3869 | spz2-RF | 1..369 | 1..369 | 1830 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 4503640..4504666 | 2008..982 | 5135 | 100 | Minus |
chr3L | 24539361 | chr3L | 4504753..4505257 | 986..482 | 2525 | 100 | Minus |
chr3L | 24539361 | chr3L | 4507304..4507784 | 481..1 | 2390 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 4504284..4505311 | 2009..982 | 5140 | 100 | Minus |
3L | 28110227 | 3L | 4505398..4505902 | 986..482 | 2525 | 100 | Minus |
3L | 28110227 | 3L | 4507949..4508429 | 481..1 | 2390 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 4504284..4505311 | 2009..982 | 5140 | 100 | Minus |
3L | 28103327 | 3L | 4505398..4505902 | 986..482 | 2525 | 100 | Minus |
3L | 28103327 | 3L | 4507949..4508429 | 481..1 | 2390 | 99.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 4503640..4504663 | 985..2008 | 100 | <- | Minus |
chr3L | 4504755..4505257 | 482..984 | 100 | <- | Minus |
chr3L | 4507304..4507784 | 1..481 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32244-RC | 1..1365 | 529..1893 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NT1-RE | 1..1365 | 529..1893 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NT1-RC | 1..1365 | 529..1893 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NT1-RC | 1..1365 | 529..1893 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32244-RB | 1..2008 | 1..2008 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NT1-RB | 1..2008 | 1..2008 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NT1-RB | 5..2012 | 1..2008 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NT1-RB | 5..2012 | 1..2008 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4504285..4505308 | 985..2008 | 100 | <- | Minus |
3L | 4505400..4505902 | 482..984 | 100 | <- | Minus |
3L | 4507949..4508429 | 1..481 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4504285..4505308 | 985..2008 | 100 | <- | Minus |
3L | 4505400..4505902 | 482..984 | 100 | <- | Minus |
3L | 4507949..4508429 | 1..481 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4504285..4505308 | 985..2008 | 100 | <- | Minus |
3L | 4505400..4505902 | 482..984 | 100 | <- | Minus |
3L | 4507949..4508429 | 1..481 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 4505400..4505902 | 482..984 | 100 | <- | Minus |
arm_3L | 4504285..4505308 | 985..2008 | 100 | <- | Minus |
arm_3L | 4507949..4508429 | 1..481 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4504285..4505308 | 985..2008 | 100 | <- | Minus |
3L | 4505400..4505902 | 482..984 | 100 | <- | Minus |
3L | 4507949..4508429 | 1..481 | 99 | Minus |
Translation from 528 to 1892
> FI02176.hyp MKAGRAFGCLFWALLYCVLYLDLVSGNSADDELMDFDFADSNDAAMEDWQ LDDLEEAKKAEQAEKKLESNMLDFSVDLDEPEPEKQLPPFDWRERVLRNA LAKALADEGLRQKFAEVLPILRMLSSQQRLALSALISAQMNAKKGHELKF EQVRMMFGNEKKLLLPIVFDIANLIKSSTRKYINLGSDLASSALYHTPIN RREDDLTPEESQQDDQLGTIAVEVEPKKVSTEEVQLESLEDFFDEMGSEV LDPQMINEALTGDLHDNKTKTFKPENHGQRVRRSANEFVHKLTRSVPASV TEQQLLGGIAGRTIKLNTTAFQQPSSQEEEKMASSNGGQSYSEVEDLAFA GLNGTEIPLSADERLDLQRNSAEETEEPLPSPEELIAGPRYRLGKRPLPG QKSGSPIKRKRVTSSLRGRPKTAASSHKPVVTPPNKKCERFTSNMCIRTD DYPL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NT1-PH | 1042 | CG42576-PH | 1..454 | 1..454 | 2317 | 100 | Plus |
NT1-PG | 1042 | CG42576-PG | 1..454 | 1..454 | 2317 | 100 | Plus |
NT1-PE | 454 | CG42576-PE | 1..454 | 1..454 | 2317 | 100 | Plus |
NT1-PD | 886 | CG42576-PD | 1..454 | 1..454 | 2317 | 100 | Plus |
NT1-PB | 454 | CG42576-PB | 1..454 | 1..454 | 2317 | 100 | Plus |
Translation from 528 to 1892
> FI02176.pep MKAGRAFGCLFWALLYCVLYLDLVSGNSADDELMDFDFADSNDAAMEDWQ LDDLEEAKKAEQAEKKLESNMLDFSVDLDEPEPEKQLPPFDWRERVLRNA LAKALADEGLRQKFAEVLPILRMLSSQQRLALSALISAQMNAKKGHELKF EQVRMMFGNEKKLLLPIVFDIANLIKSSTRKYINLGSDLASSALYHTPIN RREDDLTPEESQQDDQLGTIAVEVEPKKVSTEEVQLESLEDFFDEMGSEV LDPQMINEALTGDLHDNKTKTFKPENHGQRVRRSANEFVHKLTRSVPASV TEQQLLGGIAGRTIKLNTTAFQQPSSQEEEKMASSNGGQSYSEVEDLAFA GLNGTEIPLSADERLDLQRNSAEETEEPLPSPEELIAGPRYRLGKRPLPG QKSGSPIKRKRVTSSLRGRPKTAASSHKPVVTPPNKKCERFTSNMCIRTD DYPL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24726-PA | 455 | GF24726-PA | 1..455 | 1..454 | 1758 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14177-PA | 455 | GG14177-PA | 1..455 | 1..454 | 2235 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15802-PA | 458 | GH15802-PA | 1..458 | 1..454 | 1459 | 64.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NT1-PH | 1042 | CG42576-PH | 1..454 | 1..454 | 2317 | 100 | Plus |
NT1-PG | 1042 | CG42576-PG | 1..454 | 1..454 | 2317 | 100 | Plus |
NT1-PE | 454 | CG42576-PE | 1..454 | 1..454 | 2317 | 100 | Plus |
NT1-PD | 886 | CG42576-PD | 1..454 | 1..454 | 2317 | 100 | Plus |
NT1-PB | 454 | CG42576-PB | 1..454 | 1..454 | 2317 | 100 | Plus |
NT1-PF | 1042 | CG42576-PF | 1..454 | 1..454 | 2317 | 100 | Plus |
NT1-PC | 454 | CG42576-PC | 1..454 | 1..454 | 2317 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12585-PA | 456 | GI12585-PA | 1..456 | 1..454 | 1531 | 67.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17944-PA | 452 | GL17944-PA | 1..452 | 1..454 | 1516 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16783-PA | 452 | GA16783-PA | 1..452 | 1..454 | 1639 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13966-PA | 458 | GM13966-PA | 1..437 | 1..437 | 2195 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13249-PA | 454 | GD13249-PA | 1..454 | 1..454 | 2346 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15491-PA | 447 | GJ15491-PA | 1..447 | 1..454 | 1469 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17607-PA | 436 | GK17607-PA | 5..436 | 9..454 | 1460 | 66.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20604-PA | 454 | GE20604-PA | 1..454 | 1..454 | 2236 | 92.7 | Plus |