Clone FI02801 Report

Search the DGRC for FI02801

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:28
Well:1
Vector:pFlc-1
Associated Gene/TranscriptSpf45-RA
Protein status:FI02801.pep: gold
Sequenced Size:1473

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Spf45 2008-08-15 Release 5.9 accounting
Spf45 2008-12-18 5.12 accounting

Clone Sequence Records

FI02801.complete Sequence

1473 bp assembled on 2008-08-06

GenBank Submission: BT044104.1

> FI02801.complete
GTGTGAATCGGACATTAAGTCGAACAGTTGATAGTCATTAAATCTATCGG
GCCTTGAAAATAAATAAAAACATTGTTGAAGCTCGTTGTCATCAATATCT
TAAGGTGGTGCTAGTATTGATATATTTGTTAATGGATTTGTATGACGGCA
TTGATACGAGGGCTCGATCTAGCCAGATTGATGGATGGTCTTCGGGAATA
AAAATGTTACAGACCCAGCTGGCAGTAAAAATGGCTGTCAAAAAACCACT
TATGACGCCAGTGGTTAATCTAAGGTCCAAACGCCTTGCAGATCCAGAAG
TTACATGTTTTGCTCCAATTACTACAGTTGTATCCAAACCATTAATAAGT
GGTAAAGCCCTTCCATCCATACTGGAAAGGATAAACAGGGGGGACTGGGA
CGTTGCCGATGAATACGATCCTCAAAGGCCAAATGAATATGAAAAACTTA
AAGAGAAAAGTAATGGCAGTGACAAAAATCGAGCAGGCGTAAGTGATCGA
GAAGACCGAGATGACAAAGAAAAAGATCGTAAACGTGGACGCGTCGGTCG
TCGAGAATTTTATAGAGACGAAGTCTCAGCCCCTAACCTGAAGCTCAGCG
GGTTTGGCCACCGGCAAAACGATGATGACATGTACTTGCCATCTCCGGGC
CTTGTAGCTAAACAGGGAGGTGCCACAATCGCTCCCCCTCCTTCCCTCCA
AGAAATGTCCATTGATAGTGGTTGTGAAGCCACTAATACTATGCCATATT
CTGCCAGCTCGGTGGCCGCCAAAATTATGGCAAAATATGGGTTTAAGGAT
GGTCAAGGTCTCGGAAAATCGGAGCAGGGCATGGCCATAGCTCTTCAAGT
AGAGAAAACCTCCAAACGTGGTGGACGGATCATACACGAAAAAGACGTTT
TTCTGCCACCCCTAGCATTGTCGCCACCTTCTATTGGCTCCCAAATAGGA
ACAAGTCCCAGCCACAAGGCCATGCCTCCTCCCCAGATGGTAGACACGGC
GGCTGAGAGTGGTGACATCGGATACAGCATTACGGAGATTATGAAATCAC
CAAGCAAGGTTGTTCTTCTACGCAACATGGTAGGACCCGGGGACGTTGAC
GAAGAATTGGAACCCGAGGTAAAAGACGAATGCAACACCAAGTACGGGGA
AGTGAACAGTGTAATCATTCACGAATCGTTCGGAACTGTGCCAGAAGATG
CAGTTAAAATATTCGTAGAGTTTAGGCGGATCGAAAGTGCAATTAAAGCT
GTAGTGGACCTTAATGGACGTTTTTTTGGAGGACGTCAAGTGCGAGCGGG
GTTTTACAACTATGATAAGTTTAAATGTTTCCAATTACATTAGAACTAAT
ACAACTAAGATTGCATTTATTTTTTTCTAAGTTATTGATAGCCTAAAAAA
TGTTTACCGCACAGAACTAGTCTTGTAAATTTCTATTAAAAACTACTTTC
TATCAAACAAAAAAAAAAAAAAA

FI02801.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:52:26
Subject Length Description Subject Range Query Range Score Percent Strand
Spf45-RA 1574 Spf45-RA 20..1482 1..1463 7315 100 Plus
Spf45.a 1457 Spf45.a 1..1457 1..1463 7200 99.5 Plus
Spf45-RB 1531 Spf45-RB 268..1439 292..1463 5860 100 Plus
Spf45-RB 1531 Spf45-RB 20..267 1..248 1240 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:12:28
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 22958380..22959379 1248..249 4970 99.8 Minus
chr2L 23010047 chr2L 22959435..22959682 248..1 1240 100 Minus
chr2L 23010047 chr2L 22958109..22958320 1458..1247 1060 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:08:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:12:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 23067145..23068144 1248..249 5000 100 Minus
2L 23513712 2L 23068200..23068447 248..1 1240 100 Minus
2L 23513712 2L 23066869..23067085 1463..1247 1085 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:49:01
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 23067145..23068144 1248..249 5000 100 Minus
2L 23513712 2L 23068200..23068447 248..1 1240 100 Minus
2L 23513712 2L 23066869..23067085 1463..1247 1085 100 Minus
Blast to na_te.dros performed on 2019-03-16 00:12:27 has no hits.

FI02801.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:13:23 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 22958109..22958318 1249..1458 100 <- Minus
chr2L 22958380..22959379 249..1248 99 <- Minus
chr2L 22959435..22959682 1..248 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:40:13 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
Spf45-RA 1..1212 132..1343 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:39:22 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
Spf45-RA 1..1212 132..1343 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:34:22 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
Spf45-RA 1..1212 132..1343 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:17:50 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
Spf45-RA 1..1212 132..1343 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:01:24 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
Spf45-RA 1..1212 132..1343 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:08:58 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
Spf45-RA 1..1458 1..1458 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:39:22 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
Spf45-RA 1..1458 1..1458 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:34:22 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
Spf45-RA 1..1397 62..1458 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-06 16:08:57 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
Spf45-RA 1..1458 1..1458 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:01:24 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
Spf45-RA 1..1397 62..1458 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:13:23 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
2L 23068200..23068447 1..248 100   Minus
2L 23066874..23067083 1249..1458 100 <- Minus
2L 23067145..23068144 249..1248 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:13:23 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
2L 23068200..23068447 1..248 100   Minus
2L 23066874..23067083 1249..1458 100 <- Minus
2L 23067145..23068144 249..1248 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:13:23 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
2L 23068200..23068447 1..248 100   Minus
2L 23066874..23067083 1249..1458 100 <- Minus
2L 23067145..23068144 249..1248 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:34:22 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22959606..22959815 1249..1458 100 <- Minus
arm_2L 22959877..22960876 249..1248 100 <- Minus
arm_2L 22960932..22961179 1..248 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:21:38 Download gff for FI02801.complete
Subject Subject Range Query Range Percent Splice Strand
2L 23066874..23067083 1249..1458 100 <- Minus
2L 23067145..23068144 249..1248 100 <- Minus
2L 23068200..23068447 1..248 100   Minus

FI02801.pep Sequence

Translation from 131 to 1342

> FI02801.pep
MDLYDGIDTRARSSQIDGWSSGIKMLQTQLAVKMAVKKPLMTPVVNLRSK
RLADPEVTCFAPITTVVSKPLISGKALPSILERINRGDWDVADEYDPQRP
NEYEKLKEKSNGSDKNRAGVSDREDRDDKEKDRKRGRVGRREFYRDEVSA
PNLKLSGFGHRQNDDDMYLPSPGLVAKQGGATIAPPPSLQEMSIDSGCEA
TNTMPYSASSVAAKIMAKYGFKDGQGLGKSEQGMAIALQVEKTSKRGGRI
IHEKDVFLPPLALSPPSIGSQIGTSPSHKAMPPPQMVDTAAESGDIGYSI
TEIMKSPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHESF
GTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFYNYDKFKCF
QLH*

FI02801.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:05:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15900-PA 401 GF15900-PA 1..401 1..403 1280 69.3 Plus
Dana\GF25032-PA 643 GF25032-PA 542..636 308..397 199 47.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:05:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21408-PA 406 GG21408-PA 1..406 1..403 1878 88.7 Plus
Dere\GG11065-PA 200 GG11065-PA 1..200 204..403 961 92.5 Plus
Dere\GG14596-PA 731 GG14596-PA 630..724 308..397 205 47.9 Plus
Dere\GG20057-PA 440 GG20057-PA 338..434 306..397 152 37.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:05:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13625-PA 451 GH13625-PA 1..451 1..403 1248 62.7 Plus
Dgri\GH15204-PA 643 GH15204-PA 542..636 308..397 200 47.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:09:26
Subject Length Description Subject Range Query Range Score Percent Strand
Spf45-PA 403 CG17540-PA 1..403 1..403 2086 100 Plus
Spf45-PC 363 CG17540-PC 1..363 41..403 1885 100 Plus
Spf45-PB 371 CG17540-PB 6..371 38..403 1819 95.9 Plus
hfp-PJ 545 CG12085-PJ 444..538 308..397 192 47.9 Plus
hfp-PI 545 CG12085-PI 444..538 308..397 192 47.9 Plus
hfp-PH 545 CG12085-PH 444..538 308..397 192 47.9 Plus
hfp-PG 545 CG12085-PG 444..538 308..397 192 47.9 Plus
hfp-PF 545 CG12085-PF 444..538 308..397 192 47.9 Plus
hfp-PE 545 CG12085-PE 444..538 308..397 192 47.9 Plus
hfp-PB 545 CG12085-PB 444..538 308..397 192 47.9 Plus
hfp-PD 545 CG12085-PD 444..538 308..397 192 47.9 Plus
hfp-PC 545 CG12085-PC 444..538 308..397 192 47.9 Plus
hfp-PA 637 CG12085-PA 536..630 308..397 192 47.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:05:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11727-PA 438 GI11727-PA 1..438 1..403 1240 62.3 Plus
Dmoj\GI16722-PA 616 GI16722-PA 515..609 308..397 203 47.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:05:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21138-PA 418 GL21138-PA 1..418 1..403 1285 67.4 Plus
Dper\GL22585-PA 653 GL22585-PA 552..646 308..397 200 47.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:05:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA29081-PA 418 GA29081-PA 1..418 1..403 1285 67.4 Plus
Dpse\GA11385-PA 653 GA11385-PA 552..646 308..397 200 47.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:05:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11754-PA 400 GM11754-PA 1..400 1..403 1961 92.6 Plus
Dsec\GM11755-PA 450 GM11755-PA 1..169 204..381 713 80.3 Plus
Dsec\GM14211-PA 616 GM14211-PA 515..609 308..397 203 47.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 02:05:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17712-PA 403 GD17712-PA 1..403 1..403 2009 94.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:05:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13092-PA 432 GJ13092-PA 1..432 1..403 1248 64.2 Plus
Dvir\GJ12466-PA 645 GJ12466-PA 544..638 308..397 203 47.9 Plus
Dvir\GJ20975-PA 428 GJ20975-PA 317..428 297..403 154 37.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 02:05:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23713-PA 443 GK23713-PA 1..443 1..403 1313 64.6 Plus
Dwil\GK17204-PA 631 GK17204-PA 530..624 308..397 206 49 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 02:05:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10978-PA 367 GE10978-PA 1..367 34..403 1656 85.4 Plus
Dyak\GE20955-PA 637 GE20955-PA 536..630 308..397 205 47.9 Plus
Dyak\GE11595-PA 437 GE11595-PA 335..431 306..397 157 39.8 Plus

FI02801.hyp Sequence

Translation from 131 to 1342

> FI02801.hyp
MDLYDGIDTRARSSQIDGWSSGIKMLQTQLAVKMAVKKPLMTPVVNLRSK
RLADPEVTCFAPITTVVSKPLISGKALPSILERINRGDWDVADEYDPQRP
NEYEKLKEKSNGSDKNRAGVSDREDRDDKEKDRKRGRVGRREFYRDEVSA
PNLKLSGFGHRQNDDDMYLPSPGLVAKQGGATIAPPPSLQEMSIDSGCEA
TNTMPYSASSVAAKIMAKYGFKDGQGLGKSEQGMAIALQVEKTSKRGGRI
IHEKDVFLPPLALSPPSIGSQIGTSPSHKAMPPPQMVDTAAESGDIGYSI
TEIMKSPSKVVLLRNMVGPGDVDEELEPEVKDECNTKYGEVNSVIIHESF
GTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFYNYDKFKCF
QLH*

FI02801.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:21:23
Subject Length Description Subject Range Query Range Score Percent Strand
Spf45-PA 403 CG17540-PA 1..403 1..403 2086 100 Plus
Spf45-PC 363 CG17540-PC 1..363 41..403 1885 100 Plus
Spf45-PB 371 CG17540-PB 6..371 38..403 1819 95.9 Plus
pUf68-PJ 545 CG12085-PJ 444..538 308..397 192 47.9 Plus
pUf68-PI 545 CG12085-PI 444..538 308..397 192 47.9 Plus