Clone FI02814 Report

Search the DGRC for FI02814

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:28
Well:14
Vector:pFlc-1
Associated Gene/TranscriptTsp42Ee-RA
Protein status:FI02814.pep: gold
Sequenced Size:1408

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Tsp42Ee 2008-12-18 5.12 accounting

Clone Sequence Records

FI02814.complete Sequence

1408 bp assembled on 2008-09-12

GenBank Submission: BT044107.1

> FI02814.complete
ACTGACTAACAGAAAGCTGTTCGACTTGAACGGACGCGTATTTCGTTGGA
ATATAAATTGGTGATAATTTAAAGTCGAAGACGGTACAGTAAAGCAACAT
CAAGATGGACTGCGGCACATCTATGGTCAAATACATCCTCTTCATATTCA
ACACCATTGTGTCGGTTATCGGCATCTTGGGCATTGTTTATGGCGTGCTG
ATTCTGAAGAGCATCGGTGTAGTTGAAGTTAATGGACAGGTGGGCTTCCC
GATACAGGCTCTTATGCCGATCATTCTTATCAGCTTGGGCTCGATTGTGG
TCTTCATTTCATTCCTGGGATGCTGCGGTGCCATTCGCGAATCCGTCTGC
ATGACCATGAGCTATGCCACCTTCTTGCTGATCCTGCTGATCCTGCAGCT
GACGTTCGTTGTTCTGCTGTTTACCCACAGGGAAGAGTTTGAGAACGCAA
TGGGAAACGTTATCGAGAATGCATGGAATTCTGAACATACTTATAAGGGA
GGTGTCTTCGACACCATTCAGAAATCGTTGCACTGCTGCGGATCAAGCTC
TGCTCTGGACTACATCGGCAAGGGAGACTTGGTGCCCCCAAGTTGTTGCA
GCGGTTCGTGCCTGATCCCGACTAACTACTACCCGGGATGCCGTGGAAAG
TTCGTCGAATTAATGACCACTGGATCTGATAACGCTAAATATGTGGGCAT
CGGCCTCATCGGAATAGAGCTGATCGGCTTTATCTTTGCCTGCTGCCTGG
CCAACAACGTGCGTAACTACAAGCGCCGGAACGCCTACTAAGCAATAGGT
GTATCCATCAACTACATCTAGAGGCACACCCACATCCAGTAGCACACACA
CCTCACATTCTCATTAACTTTTACAGTCGTTGAACGCACATACACAACGG
GATACACAATAACACCTTGAAATAAGCCATTTAAGTGGATATTTGTCACG
GAAAAACAAGAAGAAGCTTAGTTTAAGGCGATATGAAATGCTTACATTTT
TGATATCCTATGTATTTCTGGTAAAATTCATGTTATACCTATCGAACGAA
CGAGCAAACAAAGATATTTCCAAAGCCTTTGTACAAACGTTTTACTTGTT
AAACCGAATCCCCACACATTAACAAAATAAACACGTTAATAATGATATAT
TTGTTCAAAATTAAGGATATAATCTATAAACTGTTGAGAGTCCCAATGCG
AAAAGAAATATAAATTTGTAATAAACATATGTATATACTGGTATATATGT
TTGTAAGTACATTGTTCATTCGATTCATATTTGTAAGGAGAATCTCCGGG
AAAGATTTAAATTTGGAAGAAGCGTCAATAATCGAGAGCTCGAATTGCAT
AAGGAATTTATGAATAAAGCATTTACTATGTATTTATATACCAAAAAAAA
AAAAAAAA

FI02814.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:00:56
Subject Length Description Subject Range Query Range Score Percent Strand
Tsp42Ee-RA 1460 Tsp42Ee-RA 63..1456 1..1394 6955 99.9 Plus
Tsp42Ee.j 2320 Tsp42Ee.j 63..1456 1..1394 6955 99.9 Plus
Tsp42Ee.b 1935 Tsp42Ee.b 704..1935 163..1394 6145 99.9 Plus
Tsp42Ee.b 1935 Tsp42Ee.b 9..174 1..166 830 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:50:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 2905110..2905784 718..1392 3360 99.9 Plus
chr2R 21145070 chr2R 2904434..2904797 164..527 1805 99.7 Plus
chr2R 21145070 chr2R 2904856..2905052 527..723 970 99.5 Plus
chr2R 21145070 chr2R 2900434..2900521 79..166 440 100 Plus
chr2R 21145070 chr2R 2899659..2899738 1..80 400 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:08:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:50:09
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7017688..7018364 718..1394 3370 99.9 Plus
2R 25286936 2R 7017012..7017375 164..527 1820 100 Plus
2R 25286936 2R 7017434..7017630 527..723 970 99.5 Plus
2R 25286936 2R 7013031..7013118 79..166 440 100 Plus
2R 25286936 2R 7012256..7012335 1..80 400 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:19:33
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 7018887..7019563 718..1394 3370 99.8 Plus
2R 25260384 2R 7018211..7018574 164..527 1820 100 Plus
2R 25260384 2R 7018633..7018829 527..723 970 99.4 Plus
2R 25260384 2R 7014230..7014317 79..166 440 100 Plus
2R 25260384 2R 7013455..7013534 1..80 400 100 Plus
Blast to na_te.dros performed 2019-03-15 20:50:09
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy4 6852 gypsy4 GYPSY4 6852bp 482..746 1046..1309 124 55.5 Plus

FI02814.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:50:57 Download gff for FI02814.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 2899659..2899738 1..80 100 -> Plus
chr2R 2900436..2900519 81..164 100 -> Plus
chr2R 2904435..2904797 165..527 99 -> Plus
chr2R 2904857..2905048 528..719 100 -> Plus
chr2R 2905112..2905784 720..1392 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:40:27 Download gff for FI02814.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp42Ee-RA 1..687 105..791 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:00:58 Download gff for FI02814.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp42Ee-RA 1..687 105..791 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:25:01 Download gff for FI02814.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp42Ee-RA 1..687 105..791 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:32:07 Download gff for FI02814.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp42Ee-RA 1..687 105..791 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:19:16 Download gff for FI02814.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp42Ee-RA 1..1392 1..1392 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:00:58 Download gff for FI02814.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp42Ee-RA 1..1392 1..1392 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:25:01 Download gff for FI02814.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp42Ee-RA 3..1394 1..1392 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-12 15:54:49 Download gff for FI02814.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp42Ee-RA 1..1392 1..1392 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:32:07 Download gff for FI02814.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp42Ee-RA 3..1394 1..1392 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:50:57 Download gff for FI02814.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7012256..7012335 1..80 100 -> Plus
2R 7013033..7013116 81..164 100 -> Plus
2R 7017013..7017375 165..527 100 -> Plus
2R 7017435..7017626 528..719 100 -> Plus
2R 7017690..7018362 720..1392 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:50:57 Download gff for FI02814.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7012256..7012335 1..80 100 -> Plus
2R 7013033..7013116 81..164 100 -> Plus
2R 7017013..7017375 165..527 100 -> Plus
2R 7017435..7017626 528..719 100 -> Plus
2R 7017690..7018362 720..1392 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:50:57 Download gff for FI02814.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7012256..7012335 1..80 100 -> Plus
2R 7013033..7013116 81..164 100 -> Plus
2R 7017013..7017375 165..527 100 -> Plus
2R 7017435..7017626 528..719 100 -> Plus
2R 7017690..7018362 720..1392 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:25:01 Download gff for FI02814.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2900538..2900621 81..164 100 -> Plus
arm_2R 2904518..2904880 165..527 100 -> Plus
arm_2R 2904940..2905131 528..719 100 -> Plus
arm_2R 2899761..2899840 1..80 100 -> Plus
arm_2R 2905195..2905867 720..1392 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:28:11 Download gff for FI02814.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7018212..7018574 165..527 100 -> Plus
2R 7018634..7018825 528..719 100 -> Plus
2R 7018889..7019561 720..1392 99   Plus
2R 7013455..7013534 1..80 100 -> Plus
2R 7014232..7014315 81..164 100 -> Plus

FI02814.hyp Sequence

Translation from 104 to 790

> FI02814.hyp
MDCGTSMVKYILFIFNTIVSVIGILGIVYGVLILKSIGVVEVNGQVGFPI
QALMPIILISLGSIVVFISFLGCCGAIRESVCMTMSYATFLLILLILQLT
FVVLLFTHREEFENAMGNVIENAWNSEHTYKGGVFDTIQKSLHCCGSSSA
LDYIGKGDLVPPSCCSGSCLIPTNYYPGCRGKFVELMTTGSDNAKYVGIG
LIGIELIGFIFACCLANNVRNYKRRNAY*

FI02814.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:21:55
Subject Length Description Subject Range Query Range Score Percent Strand
Tsp42Ee-PB 228 CG10106-PB 1..228 1..228 1192 100 Plus
Tsp42Ee-PA 228 CG10106-PA 1..228 1..228 1192 100 Plus
Tsp42Ea-PC 226 CG18817-PC 1..226 1..228 519 45.2 Plus
Tsp42Ea-PB 226 CG18817-PB 1..226 1..228 519 45.2 Plus
Tsp42Ea-PA 226 CG18817-PA 1..226 1..228 519 45.2 Plus

FI02814.pep Sequence

Translation from 104 to 790

> FI02814.pep
MDCGTSMVKYILFIFNTIVSVIGILGIVYGVLILKSIGVVEVNGQVGFPI
QALMPIILISLGSIVVFISFLGCCGAIRESVCMTMSYATFLLILLILQLT
FVVLLFTHREEFENAMGNVIENAWNSEHTYKGGVFDTIQKSLHCCGSSSA
LDYIGKGDLVPPSCCSGSCLIPTNYYPGCRGKFVELMTTGSDNAKYVGIG
LIGIELIGFIFACCLANNVRNYKRRNAY*

FI02814.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:42:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12682-PA 227 GF12682-PA 1..227 1..228 939 78.5 Plus
Dana\GF13154-PA 226 GF13154-PA 1..226 1..228 543 46.1 Plus
Dana\GF12681-PA 228 GF12681-PA 1..228 1..228 398 36.1 Plus
Dana\GF12679-PA 223 GF12679-PA 1..222 1..221 315 32.9 Plus
Dana\GF12680-PA 228 GF12680-PA 1..224 1..227 292 32.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:42:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23243-PA 228 GG23243-PA 1..228 1..228 940 85.1 Plus
Dere\GG23240-PA 226 GG23240-PA 1..226 1..228 482 44.2 Plus
Dere\GG10779-PA 227 GG10779-PA 1..227 1..228 392 37.3 Plus
Dere\GG23241-PA 222 GG23241-PA 1..221 1..221 326 32.9 Plus
Dere\GG23242-PA 232 GG23242-PA 1..231 1..228 309 32.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:42:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21499-PA 230 GH21499-PA 1..230 1..228 816 72.2 Plus
Dgri\GH21494-PA 226 GH21494-PA 1..226 1..228 521 45.2 Plus
Dgri\GH13019-PA 162 GH13019-PA 8..156 20..166 477 69.8 Plus
Dgri\GH21498-PA 227 GH21498-PA 1..227 1..228 382 35.7 Plus
Dgri\GH21496-PA 223 GH21496-PA 1..222 1..221 316 34.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:51:22
Subject Length Description Subject Range Query Range Score Percent Strand
Tsp42Ee-PB 228 CG10106-PB 1..228 1..228 1192 100 Plus
Tsp42Ee-PA 228 CG10106-PA 1..228 1..228 1192 100 Plus
Tsp42Ea-PC 226 CG18817-PC 1..226 1..228 519 45.2 Plus
Tsp42Ea-PB 226 CG18817-PB 1..226 1..228 519 45.2 Plus
Tsp42Ea-PA 226 CG18817-PA 1..226 1..228 519 45.2 Plus
Tsp42Ed-PB 227 CG12846-PB 1..227 1..228 391 36.1 Plus
Tsp42Ed-PA 227 CG12846-PA 1..227 1..228 391 36.1 Plus
CG30160-PA 222 CG30160-PA 1..220 1..220 336 33 Plus
Tsp42Eb-PB 222 CG18816-PB 1..220 1..220 336 33 Plus
Tsp42El-PA 217 CG12840-PA 1..217 1..228 330 36.1 Plus
Tsp42Ec-PA 232 CG12847-PA 1..223 1..221 330 33.3 Plus
Tsp47F-PB 239 CG9033-PB 4..239 3..225 286 28.6 Plus
Tsp42Er-PA 211 CG12837-PA 7..211 7..228 266 32.9 Plus
Tsp42Eh-PB 231 CG12844-PB 1..226 1..225 256 27.9 Plus
Tsp42Ef-PA 220 CG12845-PA 4..220 5..228 225 26.5 Plus
lbm-PB 208 CG2374-PB 1..205 1..225 223 34.1 Plus
lbm-PA 208 CG2374-PA 1..205 1..225 223 34.1 Plus
Tsp39D-PB 235 CG8666-PB 5..229 4..220 223 25.4 Plus
Tsp42Eq-PA 219 CG12832-PA 1..218 1..228 219 26.1 Plus
Tsp42Ei-PB 229 CG12843-PB 1..224 1..226 217 27.3 Plus
Tsp42Ei-PA 229 CG12843-PA 1..224 1..226 217 27.3 Plus
Tsp29Fa-PC 248 CG9494-PC 11..239 8..220 212 27.5 Plus
Tsp29Fa-PB 248 CG9494-PB 11..239 8..220 212 27.5 Plus
Tsp29Fa-PA 248 CG9494-PA 11..239 8..220 212 27.5 Plus
Tsp42Eg-PA 218 CG12142-PA 1..215 1..228 201 26.7 Plus
Tsp42Ek-PB 215 CG12841-PB 1..215 1..228 198 27.5 Plus
Tsp42Ek-PA 215 CG12841-PA 1..215 1..228 198 27.5 Plus
Tsp42En-PB 218 CG12839-PB 1..218 1..228 195 28.2 Plus
Tsp42En-PA 218 CG12839-PA 1..218 1..228 195 28.2 Plus
Tsp96F-PC 268 CG6120-PC 8..263 6..221 186 23 Plus
Tsp96F-PA 268 CG6120-PA 8..263 6..221 186 23 Plus
Tsp96F-PB 284 CG6120-PB 8..263 6..221 186 23 Plus
Tsp74F-PB 236 CG5492-PB 7..235 1..219 177 28.7 Plus
Tsp74F-PA 236 CG5492-PA 7..235 1..219 177 28.7 Plus
Tsp66E-PC 267 CG4999-PC 4..258 2..216 170 25.4 Plus
Tsp66E-PA 267 CG4999-PA 4..258 2..216 170 25.4 Plus
Tsp66E-PB 267 CG4999-PB 4..258 2..216 170 25.4 Plus
Tsp29Fb-PC 308 CG9496-PC 8..250 1..223 163 24.7 Plus
Tsp29Fb-PA 308 CG9496-PA 8..250 1..223 163 24.7 Plus
Tsp29Fb-PB 308 CG9496-PB 8..250 1..223 163 24.7 Plus
Tsp86D-PB 291 CG4591-PB 28..179 5..150 149 26.8 Plus
Tsp86D-PA 291 CG4591-PA 28..179 5..150 149 26.8 Plus
Tsp86D-PC 316 CG4591-PC 28..179 5..150 149 26.8 Plus
Tsp42Eo-PA 219 CG12838-PA 14..219 14..228 145 24.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:42:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19469-PA 231 GI19469-PA 1..231 1..228 812 70.6 Plus
Dmoj\GI19464-PA 226 GI19464-PA 1..226 1..228 525 46.5 Plus
Dmoj\GI19468-PA 227 GI19468-PA 1..227 1..228 419 39.9 Plus
Dmoj\GI19465-PA 223 GI19465-PA 1..222 1..221 331 35.7 Plus
Dmoj\GI19466-PA 230 GI19466-PA 1..225 1..221 293 30.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:42:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11138-PA 252 GL11138-PA 1..252 1..228 881 68.7 Plus
Dper\GL11133-PA 226 GL11133-PA 1..226 1..228 511 44.3 Plus
Dper\GL11136-PA 227 GL11136-PA 1..227 1..228 381 35.6 Plus
Dper\GL11146-PA 217 GL11146-PA 1..217 1..228 300 35.6 Plus
Dper\GL11135-PA 229 GL11135-PA 1..223 1..227 287 31.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:42:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10076-PA 228 GA10076-PA 1..228 1..228 919 75.9 Plus
Dpse\GA15095-PA 226 GA15095-PA 1..226 1..228 511 44.3 Plus
Dpse\GA11851-PA 227 GA11851-PA 1..227 1..228 381 35.6 Plus
Dpse\GA11846-PA 217 GA11846-PA 1..217 1..228 294 35.2 Plus
Dpse\GA15688-PA 223 GA15688-PA 1..222 1..221 290 32.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:42:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16190-PA 228 GM16190-PA 1..228 1..228 983 87.3 Plus
Dsec\GM20915-PA 228 GM20915-PA 1..228 1..228 982 87.3 Plus
Dsec\GM18744-PA 228 GM18744-PA 1..228 1..228 980 87.3 Plus
Dsec\GM20912-PA 226 GM20912-PA 1..226 1..228 504 45.2 Plus
Dsec\GM20827-PA 227 GM20827-PA 1..227 1..228 381 36.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:42:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10444-PA 228 GD10444-PA 1..228 1..228 997 88.6 Plus
Dsim\GD10441-PA 226 GD10441-PA 1..226 1..228 496 44.8 Plus
Dsim\GD10280-PA 227 GD10280-PA 1..227 1..228 385 36.1 Plus
Dsim\GD10442-PA 222 GD10442-PA 1..221 1..221 317 32.5 Plus
Dsim\GD10443-PA 232 GD10443-PA 1..231 1..228 284 30.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:42:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15128-PA 230 GJ15128-PA 1..230 1..228 810 73.5 Plus
Dvir\GJ15124-PA 226 GJ15124-PA 1..226 1..228 525 45.7 Plus
Dvir\GJ15127-PA 227 GJ15127-PA 1..227 1..228 407 38.6 Plus
Dvir\GJ15137-PA 217 GJ15137-PA 1..217 1..228 277 37.8 Plus
Dvir\GJ21977-PA 240 GJ21977-PA 4..240 3..226 274 29.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:42:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21776-PA 228 GK21776-PA 1..228 1..228 834 73.7 Plus
Dwil\GK21771-PA 226 GK21771-PA 1..226 1..228 513 43 Plus
Dwil\GK21775-PA 229 GK21775-PA 1..229 1..228 388 37.3 Plus
Dwil\GK21772-PA 222 GK21772-PA 1..217 1..217 355 36.4 Plus
Dwil\GK21783-PA 217 GK21783-PA 1..217 1..228 336 36.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:42:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\Tsp42Ee-PA 228 GE19093-PA 1..228 1..228 898 80.7 Plus
Dyak\GE19090-PA 226 GE19090-PA 1..226 1..228 496 44.8 Plus
Dyak\Tsp42Ed-PA 227 GE24279-PA 1..227 1..228 388 36.1 Plus
Dyak\GE19091-PA 222 GE19091-PA 1..221 1..221 326 33.3 Plus
Dyak\GE19092-PA 232 GE19092-PA 1..231 1..228 308 32.6 Plus