Clone FI02817 Report

Search the DGRC for FI02817

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:28
Well:17
Vector:pFlc-1
Associated Gene/TranscriptCG6583-RA
Protein status:FI02817.pep: gold
Sequenced Size:1117

Clone Sequence Records

FI02817.complete Sequence

1117 bp assembled on 2009-01-06

GenBank Submission: BT056238.1

> FI02817.complete
ATATGGTCACACAGTAACTCGCGTTATTTATTTTCTTGTTTTAATTCTAT
TTTATTTAAGTTAAACAAAGCGCACAAAACAGTTTTAAGTAAAAAATGAA
TGTCCTGCTCCGTTGTACGTTCCTGCTGCTCACCCTGGCCATATGTGGCA
GCTGGGCCATTCGATGCTACCAGTGCTCCTCCGACCAGGATCGCAAGGGA
CACGACAGCTGTGGCGCCTACAAGAGATTCAACCGCACCGAGCACATTTC
CATTGAGTGCAACAGCGACGAGAGCCACATGCCAGGATCCTTCTGCATGA
AGGTGGTGCAGCAGGGACCGAGAGGATTCATCTGGGACGGTCGTTGGCGC
CAGGTGATCCGACGATGTGCATCCGTTTCCGATACCGGAGTGGTTGGCGT
CTGTAACTGGGGAGTCTACGAAAACGGAGTGTACTGGGAGGAGTGCTACT
GCTCCAGCGACAGCTGCAATGGTTCCAGCTTAGTTCAAATGCACGGATCC
CTGCAGCTTCTGTTGGGACTCCTGTTGATTGGCGTTGCCTCCAGAATATT
TAGAAGTTAATAGGAAAACCAGGCTTATCCTCACCACAAACGAAACACGC
AATAAGTGCCTTTTCGCCACTCCACATGATATCTAAGCTAGGATTGACTT
TTGATATCAAAAACACATTCCGTCCACCTTTTTTCCTGCCTATAATTAAG
TCGAAAAGTTGAAAACATTTTAATCGTATAGGTACATTAGTTATCTACAA
TATCCAAACAAGAGGCAGGTAAATTTACAGACCAAAACTAGCTAAAATAT
TTAAATGAAAAGTAACGTTAAACAATTGTAAATTTCCTATGTCGCTTGTA
CTTTTTATATAGTTAACTTAATGAACATGTTTTCAAAATGATTTTACTAC
ATTTGATTTTTAAAAAATGACCATTCCGAAAATGCTTACGTTTGACATAT
TTATTACTAGTATTTACCTGCCATATCCGAATAACCACTACCATATCGAA
AAACCAGTAAATTGTACACACAGAATATGAAAATATATACTATATTAAGA
GTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
GAAAAAAAAAAAAAAAA

FI02817.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:44:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG6583-RA 1119 CG6583-RA 19..1075 1..1058 5250 99.9 Plus
CG6583.a 1068 CG6583.a 19..1068 1..1055 5150 99.5 Plus
CG17217-RA 639 CG17217-RA 595..639 1058..1014 225 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:51:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 12169855..12170578 1058..334 3560 99.7 Minus
chr2L 23010047 chr2L 12170770..12170957 334..147 925 99.5 Minus
chr2L 23010047 chr2L 12171076..12171223 148..1 740 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:08:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:51:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12171201..12171924 1058..334 3575 99.9 Minus
2L 23513712 2L 12172116..12172303 334..147 940 100 Minus
2L 23513712 2L 12172422..12172569 148..1 740 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:41:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12171201..12171924 1058..334 3585 99.8 Minus
2L 23513712 2L 12172116..12172303 334..147 940 100 Minus
2L 23513712 2L 12172422..12172569 148..1 740 100 Minus
Blast to na_te.dros performed 2019-03-15 20:51:24
Subject Length Description Subject Range Query Range Score Percent Strand
Tabor 7345 Tabor TABOR 7345bp 1463..1567 999..1100 139 61.9 Plus
HMS-Beagle2 7220 HMS-Beagle2 Beagle2 7220bp 2108..2241 654..793 110 57.7 Plus

FI02817.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:52:20 Download gff for FI02817.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 12169858..12170578 334..1055 99 <- Minus
chr2L 12170771..12170956 148..333 99 <- Minus
chr2L 12171077..12171223 1..147 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:50:16 Download gff for FI02817.complete
Subject Subject Range Query Range Percent Splice Strand
CG6583-RA 1..465 96..560 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:22:41 Download gff for FI02817.complete
Subject Subject Range Query Range Percent Splice Strand
CG6583-RA 1..465 96..560 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:26:48 Download gff for FI02817.complete
Subject Subject Range Query Range Percent Splice Strand
CG6583-RA 1..465 96..560 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:33:32 Download gff for FI02817.complete
Subject Subject Range Query Range Percent Splice Strand
CG6583-RA 1..465 96..560 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-01-06 14:30:32 Download gff for FI02817.complete
Subject Subject Range Query Range Percent Splice Strand
CG6583-RA 1..1054 1..1055 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:22:40 Download gff for FI02817.complete
Subject Subject Range Query Range Percent Splice Strand
CG6583-RA 1..1054 1..1055 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:26:48 Download gff for FI02817.complete
Subject Subject Range Query Range Percent Splice Strand
CG6583-RA 18..1071 1..1055 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:33:32 Download gff for FI02817.complete
Subject Subject Range Query Range Percent Splice Strand
CG6583-RA 18..1071 1..1055 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:52:20 Download gff for FI02817.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12171204..12171924 334..1055 99 <- Minus
2L 12172117..12172302 148..333 100 <- Minus
2L 12172423..12172569 1..147 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:52:20 Download gff for FI02817.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12171204..12171924 334..1055 99 <- Minus
2L 12172117..12172302 148..333 100 <- Minus
2L 12172423..12172569 1..147 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:52:20 Download gff for FI02817.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12171204..12171924 334..1055 99 <- Minus
2L 12172117..12172302 148..333 100 <- Minus
2L 12172423..12172569 1..147 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:26:48 Download gff for FI02817.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12171204..12171924 334..1055 99 <- Minus
arm_2L 12172117..12172302 148..333 100 <- Minus
arm_2L 12172423..12172569 1..147 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:10:26 Download gff for FI02817.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12171204..12171924 334..1055 99 <- Minus
2L 12172117..12172302 148..333 100 <- Minus
2L 12172423..12172569 1..147 100   Minus

FI02817.hyp Sequence

Translation from 95 to 559

> FI02817.hyp
MNVLLRCTFLLLTLAICGSWAIRCYQCSSDQDRKGHDSCGAYKRFNRTEH
ISIECNSDESHMPGSFCMKVVQQGPRGFIWDGRWRQVIRRCASVSDTGVV
GVCNWGVYENGVYWEECYCSSDSCNGSSLVQMHGSLQLLLGLLLIGVASR
IFRS*

FI02817.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:22:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG6583-PA 154 CG6583-PA 1..154 1..154 850 100 Plus

FI02817.pep Sequence

Translation from 95 to 559

> FI02817.pep
MNVLLRCTFLLLTLAICGSWAIRCYQCSSDQDRKGHDSCGAYKRFNRTEH
ISIECNSDESHMPGSFCMKVVQQGPRGFIWDGRWRQVIRRCASVSDTGVV
GVCNWGVYENGVYWEECYCSSDSCNGSSLVQMHGSLQLLLGLLLIGVASR
IFRS*

FI02817.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:11:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15678-PA 154 GF15678-PA 1..154 1..154 740 89 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:11:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10270-PA 154 GG10270-PA 1..154 1..154 796 96.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:11:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11181-PA 155 GH11181-PA 1..155 1..154 690 81.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG6583-PA 154 CG6583-PA 1..154 1..154 850 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:11:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15820-PA 154 GI15820-PA 1..154 1..154 697 83.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:11:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19511-PA 155 GL19511-PA 1..153 1..153 700 88.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:11:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19701-PA 155 GA19701-PA 1..153 1..153 700 88.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:11:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26284-PA 154 GM26284-PA 1..154 1..154 792 96.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:11:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22126-PA 154 GD22126-PA 1..154 1..154 806 98.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:11:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10308-PA 154 GJ10308-PA 1..154 1..154 718 85.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:11:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14634-PA 154 GK14634-PA 1..154 1..154 679 78.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:11:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12369-PA 154 GE12369-PA 1..154 1..154 795 96.8 Plus