Clone FI02828 Report

Search the DGRC for FI02828

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:28
Well:28
Vector:pFlc-1
Associated Gene/TranscriptCG15161-RA
Protein status:FI02828.pep: gold
Sequenced Size:1620

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15161 2008-12-18 5.12 accounting

Clone Sequence Records

FI02828.complete Sequence

1620 bp assembled on 2008-09-15

GenBank Submission: BT044486.1

> FI02828.complete
AGAAAAAACGACGCGGAAAACGCTGAAAAGGAAGAAAACTCTGCTCTGGA
GATAGGAAACAAGGACGAGGGCCCAGCACCTGCAAAAGGAGCGGAAAATT
GCGGGACAAGTGTTGTGCGAATTTCGCGGAAAGCCAGGAAGTGGGCAGGA
AAACGGTGAAAGGAAACTGAATAGCTCGAGAGGACTCGCAGCTGGAGAGC
TATTTGAATCTGAATCTGAATCCGGGTCCTCGCAGCTGGTCCTTGGCCAT
GAACTTCTACGACGAGGAGATCACAATCGGCGGACCCGACTCCAAGCACC
TGAGCAGTGTTCAAATGGAGCCCCGAAATGGAGGAACAGGCGGTGGCAGA
GGTGGTGCTGGCGGTGGTGGACCAGGAGCAGTGGGCGGAGAAGGAGCTGT
ACGAAGAGCAGCCGCAGGCAGGCACCGTCGAATGTTCCAAAACAACTCTA
CTGATGACGATGGTCTGCTGCAGGACATCATTGATCACGATGACGAGGCG
GAGGACAGCGAGGATGACGATGACAGCGAGATGCAGCTGCCCCAGGGCAT
GACCATGGGCGTGGGAATGACGGGTCTGGTGCCCGGGCCGAACATGCAAA
AGCGGCCGGGAAGCAACCGAAGTTCCAAGCAAGTACCGGATGACACCCTG
AGCTCGGGCAGCGAGGAGGCCGCAATGGGTGGCAGAATGGGATCCGGAGG
AGCAAGAGGCGGAGCCAAGCTACCACATCAAAAGCTAACGCTTCCCATGA
GGGGAAGTGCTAGTGGAGCAGGAAGATCTAAGCGGCAGGATGATCAATCC
TTTATTATGAGTGCCGACAAATGGGAGGATCTGTCCGTGCCCGGAGAACT
CAAGGAACTCTTTCCCTACATCGTCAAATACACCCCGCAAACGATCGATA
CTCCGTTTCACCTGCAACCTTTCATCCCCGAGTTTGTGCCCGCTGTGGGT
GATGTGGATGCCCTTCTGAAAGTCCAGGCTCCGCCTCTTTTGCAGCCCCA
ACGCCAGAAGGATCTGAACGATCACTTGGAGAAATTGGGCTTATGGTTGC
TCGATGAGCCCTCTGGCGCTCAAAGTGAGCCCAGTCTGCTGAATATGAAA
CTTCGGTCGGTACTGAGTGGCAGCATGGGGCGAAATCCGCGTCACGCCTC
CTCCGCATCACTGGTTCCCACCGCCCGATCGGGCAAGGATATAGAGAAGT
GGATCACTGAGGTGGAACAAGTGCATATGACTCAGTCAATGTACGATGTC
CAGCCCAGAAAGGACATAGATGCCCTCCTGGAGGATTGGCCGAGATCCTT
TGGCGATGAACAAACCATTAATGCCCTTGATCAGGCCTACAGATCCTGTC
TGCAGCAGAACATTTCTGTAGCGGAATACGTGGGAGTTCTTTGCGAGAGA
TTCGGAGTGGAAGGACCTTTGGAGTCGCAGGCGGACTACATCCATAATGT
CCAGACACTCTTTGCCCTCTACTTGGCCGCCAGTCAGGCGTGGGAATAAT
AGATGCATATAAAACATAAATCATACAAATGATCAAGGAAATCAAAACAT
AATTTGTTCTTAAAATATATGTTTTAAAGTTAATAAAATATTTATTCTTA
TAGCAAAAAAAAAAAAAAAA

FI02828.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:01:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG15161-RA 1645 CG15161-RA 42..1645 1..1604 8005 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:48:43
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 18613049..18614219 1604..434 5825 99.8 Minus
chr2L 23010047 chr2L 18614344..18614777 434..1 2155 99.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:08:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:48:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18614339..18615509 1604..434 5855 100 Minus
2L 23513712 2L 18615634..18616067 434..1 2155 99.8 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:20:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18614339..18615509 1604..434 5855 100 Minus
2L 23513712 2L 18615634..18616067 434..1 2155 99.7 Minus
Blast to na_te.dros performed 2019-03-16 07:48:42
Subject Length Description Subject Range Query Range Score Percent Strand
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 1012..1103 1509..1601 147 63.4 Plus
Dwil\Vege 884 Dwil\Vege VEGE 884bp Derived from AF518730. 166..308 1603..1471 115 59 Minus

FI02828.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:49:25 Download gff for FI02828.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 18613098..18614218 435..1555 99 <- Minus
chr2L 18614344..18614777 1..434 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:40:54 Download gff for FI02828.complete
Subject Subject Range Query Range Percent Splice Strand
CG15161-RA 1..1251 249..1499 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:01:54 Download gff for FI02828.complete
Subject Subject Range Query Range Percent Splice Strand
CG15161-RA 1..1251 249..1499 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:50:51 Download gff for FI02828.complete
Subject Subject Range Query Range Percent Splice Strand
CG15161-RA 1..1251 249..1499 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:40:04 Download gff for FI02828.complete
Subject Subject Range Query Range Percent Splice Strand
CG15161-RA 1..1251 249..1499 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:20:26 Download gff for FI02828.complete
Subject Subject Range Query Range Percent Splice Strand
CG15161-RA 1..1604 1..1604 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:01:54 Download gff for FI02828.complete
Subject Subject Range Query Range Percent Splice Strand
CG15161-RA 1..1604 1..1604 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:50:51 Download gff for FI02828.complete
Subject Subject Range Query Range Percent Splice Strand
CG15161-RA 40..1643 1..1604 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 12:14:22 Download gff for FI02828.complete
Subject Subject Range Query Range Percent Splice Strand
CG15161-RA 1..1604 1..1604 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:40:04 Download gff for FI02828.complete
Subject Subject Range Query Range Percent Splice Strand
CG15161-RA 40..1643 1..1604 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:49:25 Download gff for FI02828.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18614339..18615508 435..1604 100 <- Minus
2L 18615634..18616067 1..434 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:49:25 Download gff for FI02828.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18614339..18615508 435..1604 100 <- Minus
2L 18615634..18616067 1..434 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:49:25 Download gff for FI02828.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18614339..18615508 435..1604 100 <- Minus
2L 18615634..18616067 1..434 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:50:51 Download gff for FI02828.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18614339..18615508 435..1604 100 <- Minus
arm_2L 18615634..18616067 1..434 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:29:28 Download gff for FI02828.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18614339..18615508 435..1604 100 <- Minus
2L 18615634..18616067 1..434 99   Minus

FI02828.pep Sequence

Translation from 248 to 1498

> FI02828.pep
MNFYDEEITIGGPDSKHLSSVQMEPRNGGTGGGRGGAGGGGPGAVGGEGA
VRRAAAGRHRRMFQNNSTDDDGLLQDIIDHDDEAEDSEDDDDSEMQLPQG
MTMGVGMTGLVPGPNMQKRPGSNRSSKQVPDDTLSSGSEEAAMGGRMGSG
GARGGAKLPHQKLTLPMRGSASGAGRSKRQDDQSFIMSADKWEDLSVPGE
LKELFPYIVKYTPQTIDTPFHLQPFIPEFVPAVGDVDALLKVQAPPLLQP
QRQKDLNDHLEKLGLWLLDEPSGAQSEPSLLNMKLRSVLSGSMGRNPRHA
SSASLVPTARSGKDIEKWITEVEQVHMTQSMYDVQPRKDIDALLEDWPRS
FGDEQTINALDQAYRSCLQQNISVAEYVGVLCERFGVEGPLESQADYIHN
VQTLFALYLAASQAWE*

FI02828.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:38:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14836-PA 418 GF14836-PA 1..418 1..416 1445 75.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:38:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21700-PA 422 GG21700-PA 1..422 1..416 1717 89.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:38:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10526-PA 405 GH10526-PA 1..405 1..416 1195 64.1 Plus
Dgri\GH11794-PA 405 GH11794-PA 1..405 1..416 1193 64.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:09:05
Subject Length Description Subject Range Query Range Score Percent Strand
IFT46-PA 416 CG15161-PA 1..416 1..416 2180 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:38:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18044-PA 396 GI18044-PA 1..396 1..416 1098 59 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:38:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19310-PA 414 GL19310-PA 1..414 1..416 1394 72.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:38:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13541-PA 414 GA13541-PA 1..414 1..416 1407 73.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:38:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17080-PA 418 GM17080-PA 1..418 1..416 1866 94.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:38:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21825-PA 420 GD21825-PA 1..420 1..416 1837 93.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:38:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19797-PA 388 GJ19797-PA 1..388 1..416 1161 63 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:38:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23779-PA 404 GK23779-PA 1..404 1..416 1267 67 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:38:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12723-PA 416 GE12723-PA 1..416 1..416 1752 88.7 Plus

FI02828.hyp Sequence

Translation from 248 to 1498

> FI02828.hyp
MNFYDEEITIGGPDSKHLSSVQMEPRNGGTGGGRGGAGGGGPGAVGGEGA
VRRAAAGRHRRMFQNNSTDDDGLLQDIIDHDDEAEDSEDDDDSEMQLPQG
MTMGVGMTGLVPGPNMQKRPGSNRSSKQVPDDTLSSGSEEAAMGGRMGSG
GARGGAKLPHQKLTLPMRGSASGAGRSKRQDDQSFIMSADKWEDLSVPGE
LKELFPYIVKYTPQTIDTPFHLQPFIPEFVPAVGDVDALLKVQAPPLLQP
QRQKDLNDHLEKLGLWLLDEPSGAQSEPSLLNMKLRSVLSGSMGRNPRHA
SSASLVPTARSGKDIEKWITEVEQVHMTQSMYDVQPRKDIDALLEDWPRS
FGDEQTINALDQAYRSCLQQNISVAEYVGVLCERFGVEGPLESQADYIHN
VQTLFALYLAASQAWE*

FI02828.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:22:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG15161-PA 416 CG15161-PA 1..416 1..416 2180 100 Plus