Clone FI02848 Report

Search the DGRC for FI02848

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:28
Well:48
Vector:pFlc-1
Associated Gene/TranscriptCG8562-RA
Protein status:FI02848.pep: gold
Sequenced Size:1496

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8562 2008-08-15 Release 5.9 accounting
CG8562 2008-12-18 5.12 accounting

Clone Sequence Records

FI02848.complete Sequence

1496 bp assembled on 2008-08-06

GenBank Submission: BT044114.1

> FI02848.complete
GCTGAGTTCGTGCGAAGATGAAGTTCTCTCTGGGTTTGTTAGTCCTCTTT
TTGGGCGCCACTCTTGTGGCTGCCGAACAGGATTACGAGGGTTACCGCAT
CTATGAGGTGATTCCATCGACTGCCGACCAGGCTGACCTTTTGCACCAAC
TAAGTCTGCAGGGATACGATTTCATCAGTGAGACTCGTCTATTGGGTCAT
CCTTCTCGTGTGATTGTGAGTCCCGCTCAGTTGAAGCACTTCCAGCAGCT
GGTTGAGGCAGAGAAAATGACACTTACTCTGGTGAACTCCAACCTGGGCG
CCTCCATAGCCGAGGAGTTTGCCCAGCGACAGATGCAGCGCCTTTTGGCG
CCCATCACGGGAAAGGGTCGCTTGAGCACGGAGCGCTACTATACGCACGA
GGAGATTATCAACTATATCGATGACCTGGCCCAGCGTTTTCCCAGCCGAG
TCTTCGTTAAGACCGTTGGCTGGTCCTATGAACAGCGAGTCCTGAAAACC
ATCACCATCACCAATGGCGATGGCAAGGCTAACAAGAAAGTGATCTTCAT
GGATGGTGGTTTCCATGCTAGGGAATGGATTTCTCCAGCAGCAGTCCTCT
ACGTCATCGATCAATTGGTGGAGCAGTTCGAGGAGAACGCTCATCTGCTG
AAGGACTACGACTGGGTCATCCTGCCACTGGTCAATGCCGATGGCTATGA
GCACACCCAGACCGGAACACTTGCTCGAATGTGGCGCAAAACCCGTCAGC
CATACACGTACGCTGGACAGACGTGTTACGGAGCTGATCCCAACCGGAAT
TTCGACTTCCATTGGAACGAGGAGGGCGCCTCCTCGAATCCATGTGCGGA
CACCTATGCTGGACCGACGGCCTTTTCCGAACCGGAGACGATTACCGTCC
GGGATCTGATGCACTCACTGGCCGATCGGGGAATTATGTACCTCACCCTC
CACTCCTACGGCAACTATCTGCTGTATCCATGGGGATGGACGTCCGATCT
GCCCGAGAATTGGGAGGATCTGGATGCGGTAGCCCGCACTGGAGCTGAGG
CCATTGAGAACGCCACTGGTACGGTGTACACCTATGGATCCTCCACAAAT
GTCCTGTATATTGCTGCTGGAGCCAGTGATGACTATGGCTACTATGCCGG
CTTCAATGTGTCCATCACCATGGAGTTGCCCGGTGCTGGCTCCATTGGAT
TCAATCCTCCAGTCACCCGAATCGATGAGTTTGTCACCGAAACCTGGATT
GGCATCCGTGCCATGGCCGAGAAAGTGATCGAGATGTATTAAATAAATAA
ATTAATCTATAAAACACACAATATACACAATATACCCACTGATGATAGAG
ACGTAAACGTTACAATATTTCAAATATTTTTCAGTGGATTGTTTATAAGC
TTTCTTTGTTATGGAAAATAGTATTCAATTAAAATCGAATTAGATTCACT
TGACTTTCAGAGAAAACGTAATTGGGAACCAAAAAAAAAAAAAAAA

FI02848.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:52:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG8562-RA 1550 CG8562-RA 71..1550 1..1480 7385 99.9 Plus
CG8560-RA 1690 CG8560-RA 1182..1247 939..1004 225 89.3 Plus
CG8560.a 1896 CG8560.a 1182..1247 939..1004 225 89.3 Plus
CG8560-RA 1690 CG8560-RA 756..838 498..580 205 83.1 Plus
CG8560.a 1896 CG8560.a 756..838 498..580 205 83.1 Plus
CG8560-RA 1690 CG8560-RA 903..958 645..700 175 87.5 Plus
CG8560.a 1896 CG8560.a 903..958 645..700 175 87.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:15:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 7390572..7391475 91..994 4415 99.2 Plus
chr3L 24539361 chr3L 7391536..7392019 995..1480 2320 99 Plus
chr3L 24539361 chr3L 7390397..7390487 1..91 440 98.9 Plus
chr3L 24539361 chr3L 7392743..7392961 492..710 315 76.3 Plus
chr3L 24539361 chr3L 7395117..7395319 700..498 310 76.8 Minus
chr3L 24539361 chr3L 7394838..7394893 994..939 205 91.1 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:08:47 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:15:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7398463..7399366 91..994 4520 100 Plus
3L 28110227 3L 7399427..7399915 995..1483 2445 100 Plus
3L 28110227 3L 7398288..7398378 1..91 440 98.9 Plus
3L 28110227 3L 7403007..7403209 700..498 310 76.8 Minus
3L 28110227 3L 7400633..7400851 492..710 300 75.8 Plus
3L 28110227 3L 7402728..7402783 994..939 205 91.1 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:49:26
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 7391563..7392466 91..994 4520 100 Plus
3L 28103327 3L 7392527..7393015 995..1483 2445 100 Plus
3L 28103327 3L 7391388..7391478 1..91 440 98.9 Plus
3L 28103327 3L 7393733..7393833 492..592 235 82.1 Plus
3L 28103327 3L 7395828..7395883 994..939 205 91 Minus
3L 28103327 3L 7396227..7396309 580..498 205 83.1 Minus
3L 28103327 3L 7393884..7393951 643..710 175 83.8 Plus
3L 28103327 3L 7396107..7396162 700..645 175 87.5 Minus
3L 28103327 3L 7389960..7390014 652..706 170 87.2 Plus
3L 28103327 3L 7394018..7394064 786..832 160 89.3 Plus
Blast to na_te.dros performed on 2019-03-16 06:15:58 has no hits.

FI02848.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:16:58 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 7390397..7390487 1..91 98 -> Plus
chr3L 7390573..7391475 92..994 99 -> Plus
chr3L 7391536..7392019 995..1480 93   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:41:08 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
CG8562-RA 1..1275 18..1292 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:40:20 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
CG8562-RA 1..1275 18..1292 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:57:04 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
CG8562-RA 1..1275 18..1292 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:17:55 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
CG8562-RA 1..1275 18..1292 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:16:00 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
CG8562-RA 1..1275 18..1292 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:10:04 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
CG8562-RA 1..1480 1..1480 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:40:20 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
CG8562-RA 1..1480 1..1480 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:57:04 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
CG8562-RA 4..1483 1..1480 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-06 16:09:09 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
CG8562-RA 1..1480 1..1480 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:16:00 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
CG8562-RA 4..1483 1..1480 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:16:58 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7398288..7398378 1..91 98 -> Plus
3L 7398464..7399366 92..994 100 -> Plus
3L 7399427..7399912 995..1480 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:16:58 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7398288..7398378 1..91 98 -> Plus
3L 7398464..7399366 92..994 100 -> Plus
3L 7399427..7399912 995..1480 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:16:58 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7398288..7398378 1..91 98 -> Plus
3L 7398464..7399366 92..994 100 -> Plus
3L 7399427..7399912 995..1480 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:57:04 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7391388..7391478 1..91 98 -> Plus
arm_3L 7391564..7392466 92..994 100 -> Plus
arm_3L 7392527..7393012 995..1480 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:22:17 Download gff for FI02848.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7391564..7392466 92..994 100 -> Plus
3L 7392527..7393012 995..1480 100   Plus
3L 7391388..7391478 1..91 98 -> Plus

FI02848.hyp Sequence

Translation from 2 to 1291

> FI02848.hyp
SVRAKMKFSLGLLVLFLGATLVAAEQDYEGYRIYEVIPSTADQADLLHQL
SLQGYDFISETRLLGHPSRVIVSPAQLKHFQQLVEAEKMTLTLVNSNLGA
SIAEEFAQRQMQRLLAPITGKGRLSTERYYTHEEIINYIDDLAQRFPSRV
FVKTVGWSYEQRVLKTITITNGDGKANKKVIFMDGGFHAREWISPAAVLY
VIDQLVEQFEENAHLLKDYDWVILPLVNADGYEHTQTGTLARMWRKTRQP
YTYAGQTCYGADPNRNFDFHWNEEGASSNPCADTYAGPTAFSEPETITVR
DLMHSLADRGIMYLTLHSYGNYLLYPWGWTSDLPENWEDLDAVARTGAEA
IENATGTVYTYGSSTNVLYIAAGASDDYGYYAGFNVSITMELPGAGSIGF
NPPVTRIDEFVTETWIGIRAMAEKVIEMY*

FI02848.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:23:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG8562-PA 424 CG8562-PA 1..424 6..429 2236 100 Plus
CG8560-PB 418 CG8560-PB 7..418 14..429 1154 55 Plus
CG8560-PA 418 CG8560-PA 7..418 14..429 1154 55 Plus
CG18417-PA 427 CG18417-PA 8..424 10..429 1129 54.1 Plus
CG32379-PB 344 CG32379-PB 44..342 129..429 821 50.8 Plus

FI02848.pep Sequence

Translation from 17 to 1291

> FI02848.pep
MKFSLGLLVLFLGATLVAAEQDYEGYRIYEVIPSTADQADLLHQLSLQGY
DFISETRLLGHPSRVIVSPAQLKHFQQLVEAEKMTLTLVNSNLGASIAEE
FAQRQMQRLLAPITGKGRLSTERYYTHEEIINYIDDLAQRFPSRVFVKTV
GWSYEQRVLKTITITNGDGKANKKVIFMDGGFHAREWISPAAVLYVIDQL
VEQFEENAHLLKDYDWVILPLVNADGYEHTQTGTLARMWRKTRQPYTYAG
QTCYGADPNRNFDFHWNEEGASSNPCADTYAGPTAFSEPETITVRDLMHS
LADRGIMYLTLHSYGNYLLYPWGWTSDLPENWEDLDAVARTGAEAIENAT
GTVYTYGSSTNVLYIAAGASDDYGYYAGFNVSITMELPGAGSIGFNPPVT
RIDEFVTETWIGIRAMAEKVIEMY*

FI02848.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:10:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10642-PA 425 GF10642-PA 1..425 1..424 1983 85.2 Plus
Dana\GF10643-PA 428 GF10643-PA 8..425 5..424 1140 52.8 Plus
Dana\GF23789-PA 417 GF23789-PA 21..417 23..424 1139 54.7 Plus
Dana\GF10641-PA 357 GF10641-PA 57..355 124..424 838 53.8 Plus
Dana\GF22809-PA 426 GF22809-PA 1..397 1..402 652 37 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:10:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14424-PA 424 GG14424-PA 1..424 1..424 2074 93.4 Plus
Dere\GG14425-PA 427 GG14425-PA 8..424 5..424 1164 53.2 Plus
Dere\GG14964-PA 418 GG14964-PA 20..418 22..424 1159 55.8 Plus
Dere\GG14423-PA 425 GG14423-PA 21..423 19..424 854 42.9 Plus
Dere\GG16151-PA 365 GG16151-PA 16..352 109..424 688 44 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:10:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14882-PA 423 GH14882-PA 15..423 16..424 1776 78.2 Plus
Dgri\GH14883-PA 424 GH14883-PA 7..421 5..424 1165 53.3 Plus
Dgri\GH16615-PA 418 GH16615-PA 7..418 7..424 1123 54.5 Plus
Dgri\GH14881-PA 431 GH14881-PA 23..427 19..424 891 44.8 Plus
Dgri\GH16610-PA 383 GH16610-PA 29..343 110..424 728 46 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:40:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG8562-PA 424 CG8562-PA 1..424 1..424 2236 100 Plus
CG8560-PB 418 CG8560-PB 7..418 9..424 1154 55 Plus
CG8560-PA 418 CG8560-PA 7..418 9..424 1154 55 Plus
CG18417-PA 427 CG18417-PA 8..424 5..424 1129 54.1 Plus
CG32379-PB 344 CG32379-PB 44..342 124..424 821 50.8 Plus
CG17633-PA 430 CG17633-PA 11..423 7..420 638 36.4 Plus
CG4017-PA 424 CG4017-PA 1..397 1..402 627 36.7 Plus
CG8539-PB 385 CG8539-PB 33..340 119..424 610 41.5 Plus
CG8539-PA 385 CG8539-PA 33..340 119..424 610 41.5 Plus
CG18585-PB 422 CG18585-PB 3..419 9..423 600 34.5 Plus
CG18585-PA 422 CG18585-PA 3..419 9..423 600 34.5 Plus
CG7025-PA 429 CG7025-PA 10..416 5..419 575 35.2 Plus
CG3108-PA 1132 CG3108-PA 764..1090 66..398 572 37.9 Plus
CG14820-PA 416 CG14820-PA 1..413 1..420 555 32.2 Plus
CG2915-PA 453 CG2915-PA 55..448 23..422 545 32.8 Plus
CG2915-PB 453 CG2915-PB 55..448 23..422 545 32.8 Plus
CG3097-PA 445 CG3097-PA 84..439 65..420 512 33.9 Plus
CG12374-PA 422 CG12374-PA 27..417 23..422 503 30.2 Plus
CG8563-PB 440 CG8563-PB 28..429 23..412 471 31.7 Plus
CG8563-PA 440 CG8563-PA 28..429 23..412 471 31.7 Plus
CG8564-PA 504 CG8564-PA 38..365 124..423 462 33.1 Plus
CG8564-PC 520 CG8564-PC 54..381 124..423 462 33.1 Plus
CG4408-PB 467 CG4408-PB 69..412 23..375 455 31.5 Plus
CG4408-PA 479 CG4408-PA 81..424 23..375 455 31.5 Plus
CG8945-PC 1430 CG8945-PC 981..1430 23..420 384 25.8 Plus
CG42264-PB 521 CG42264-PB 210..520 119..420 362 29 Plus
CG42264-PA 634 CG42264-PA 323..633 119..420 362 29 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:10:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12856-PA 423 GI12856-PA 19..423 20..424 1724 75.8 Plus
Dmoj\GI12859-PA 423 GI12859-PA 23..420 23..424 1180 56.3 Plus
Dmoj\GI12855-PA 396 GI12855-PA 27..393 50..424 1171 58.9 Plus
Dmoj\GI12857-PA 402 GI12857-PA 27..393 50..424 1163 58.9 Plus
Dmoj\GI12460-PA 419 GI12460-PA 2..419 3..424 1147 55.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:10:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26418-PA 424 GL26418-PA 8..421 7..424 1242 56.4 Plus
Dper\GL24275-PA 418 GL24275-PA 1..418 1..424 1061 52.8 Plus
Dper\GL26407-PA 202 GL26407-PA 4..202 226..424 1001 90.5 Plus
Dper\GL26385-PA 426 GL26385-PA 20..424 19..424 899 44.6 Plus
Dper\GL26396-PA 205 GL26396-PA 21..202 20..201 775 79.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:10:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21165-PA 425 GA21165-PA 21..425 20..424 1892 84.9 Plus
Dpse\GA14928-PA 424 GA14928-PA 8..421 7..424 1246 56.6 Plus
Dpse\GA21163-PA 418 GA21163-PA 1..418 1..424 1106 54.2 Plus
Dpse\GA16855-PA 426 GA16855-PA 20..424 19..424 893 44.1 Plus
Dpse\GA21147-PA 379 GA21147-PA 25..335 115..424 685 43.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:10:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14841-PA 424 GM14841-PA 1..424 1..424 2213 96.9 Plus
Dsec\GM13761-PA 418 GM13761-PA 1..418 7..424 1174 55.2 Plus
Dsec\GM14842-PA 336 GM14842-PA 62..333 150..424 920 63.4 Plus
Dsec\GM14840-PA 390 GM14840-PA 18..388 16..424 735 38.7 Plus
Dsec\GM13753-PA 380 GM13753-PA 33..340 119..424 630 42.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 02:10:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14014-PA 424 GD14014-PA 1..424 1..424 2221 97.4 Plus
Dsim\GD13057-PA 418 GD13057-PA 1..418 7..424 1181 55.7 Plus
Dsim\GD14015-PA 427 GD14015-PA 8..424 5..424 1138 53.9 Plus
Dsim\GD14013-PA 425 GD14013-PA 17..423 15..424 885 43.2 Plus
Dsim\GD23629-PA 430 GD23629-PA 9..423 5..420 648 36.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:10:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12999-PA 423 GJ12999-PA 20..423 21..424 1805 80.7 Plus
Dvir\GJ12363-PA 419 GJ12363-PA 20..395 21..396 1640 79 Plus
Dvir\GJ13000-PA 424 GJ13000-PA 55..421 50..424 1181 59.7 Plus
Dvir\GJ12361-PA 419 GJ12361-PA 15..419 16..424 1165 57.2 Plus
Dvir\GJ12998-PA 428 GJ12998-PA 20..424 19..424 834 42.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 02:10:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17381-PA 422 GK17381-PA 7..422 5..424 1829 80.2 Plus
Dwil\GK17382-PA 426 GK17382-PA 7..423 6..424 1165 54.3 Plus
Dwil\GK16806-PA 418 GK16806-PA 12..418 14..424 1160 55.7 Plus
Dwil\GK17380-PA 436 GK17380-PA 24..429 14..424 854 43.3 Plus
Dwil\GK16802-PA 361 GK16802-PA 32..336 116..424 695 46 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 02:10:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21615-PA 424 GE21615-PA 1..424 1..424 2182 95.3 Plus
Dyak\GE21616-PA 427 GE21616-PA 8..424 5..424 1166 54.4 Plus
Dyak\GE20414-PA 418 GE20414-PA 1..418 7..424 1162 54.7 Plus
Dyak\GE21614-PA 418 GE21614-PA 18..416 16..424 881 44.4 Plus
Dyak\GE19721-PA 352 GE19721-PA 19..352 112..424 718 44.4 Plus