BDGP Sequence Production Resources |
Search the DGRC for FI02850
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 28 |
Well: | 50 |
Vector: | pFlc-1 |
Associated Gene/Transcript | RpL34a-RA |
Protein status: | FI02850.pep: gold |
Sequenced Size: | 618 |
Gene | Date | Evidence |
---|---|---|
RpL34a | 2008-08-15 | Release 5.9 accounting |
RpL34a | 2008-12-18 | 5.12 accounting |
618 bp assembled on 2008-07-25
GenBank Submission: BT032652
> FI02850.complete TCTTCTTCCTTCTTTTGATTTCCGGAGAGAAGCTTTAAAATGGTCCAACG CTTGACTCTGAGACGACGTCTGTCGTACAACACCCGCTCCAACAAGAGGC GCATTGTGCGCACTCCCGGAGGCCGTCTGGTGTACCAGTACGTGAAGAAG AACCCCACTGTGCCACGCTGTGGTCAGTGCAAGGAGAAACTCCACGGGAT CACCCCCTCCCGGCCCAGCGAGCGTCCCAGGATGTCCAAGCGTTTGAAGA CCGTCTCCAGGACCTACGGAGGTGTCCTGTGCCACAGCTGCCTGCGAGAG AGAATCGTCCGCGCTTTCCTCATCGAAGAGCAGAAGATCGTCAAGGCTCT GAAGAGCCAGCGCGAGGCTTTGGTCAAGCCCGTCAAGAAGGTTGTGGAGA AGAAGCCGGTGAAGGCTGCCGCCAAGAAGCCCGCGGGAAAGGCAGCCGGA AAGCCAGGTGCCAAAGTCGCCGGCAAGAAGCCCGCTCCCAAGGGCGCTCC TAAAGGAGTCGTCAAGTCCAAGAAGTAACCATTTACCAGAAGGATTTGTT TGGAGCAATGATATTGAACACCTTTTTTTTGTAATAAAGAAACCACAAAT CGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL34a-RA | 672 | RpL34a-RA | 5..612 | 1..608 | 3010 | 99.6 | Plus |
RpL34a-RC | 705 | RpL34a-RC | 41..645 | 1..608 | 2940 | 99.1 | Plus |
RpL34a-RB | 638 | RpL34a-RB | 49..627 | 30..608 | 2865 | 99.6 | Plus |
RpL34a-RB | 638 | RpL34a-RB | 5..33 | 1..29 | 145 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 21881408..21881903 | 600..105 | 2480 | 100 | Minus |
chr3R | 27901430 | chr3R | 5226429..5226711 | 387..105 | 830 | 86.2 | Minus |
chr3R | 27901430 | chr3R | 21881966..21882042 | 104..28 | 385 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 26058414..26058917 | 608..105 | 2490 | 99.6 | Minus |
3R | 32079331 | 3R | 9400596..9400878 | 387..105 | 830 | 86.2 | Minus |
3R | 32079331 | 3R | 26058980..26059056 | 104..28 | 385 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 25799245..25799748 | 608..105 | 2490 | 99.6 | Minus |
3R | 31820162 | 3R | 9141427..9141709 | 387..105 | 830 | 86.2 | Minus |
3R | 31820162 | 3R | 25799811..25799887 | 104..28 | 385 | 100 | Minus |
3R | 31820162 | 3R | 9141773..9141840 | 104..37 | 175 | 83.8 | Minus |
3R | 31820162 | 3R | 25800066..25800094 | 29..1 | 145 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy6 | 7826 | gypsy6 GYPSY6 7826bp | 1445..1520 | 358..429 | 118 | 65.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21881406..21881903 | 105..602 | 99 | <- | Minus |
chr3R | 21881966..21882040 | 30..104 | 100 | <- | Minus |
chr3R | 21882223..21882251 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL34a-RB | 1..489 | 40..528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL34a-RC | 1..489 | 40..528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL34a-RA | 1..489 | 40..528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL34a-RB | 1..489 | 40..528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL34a-RA | 1..489 | 40..528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL34a-RA | 1..602 | 1..602 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL34a-RA | 5..606 | 1..602 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL34a-RA | 5..606 | 1..602 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL34a-RA | 1..602 | 1..602 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL34a-RA | 5..606 | 1..602 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26058420..26058917 | 105..602 | 99 | <- | Minus |
3R | 26058980..26059054 | 30..104 | 100 | <- | Minus |
3R | 26059235..26059263 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26058420..26058917 | 105..602 | 99 | <- | Minus |
3R | 26058980..26059054 | 30..104 | 100 | <- | Minus |
3R | 26059235..26059263 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26058420..26058917 | 105..602 | 99 | <- | Minus |
3R | 26058980..26059054 | 30..104 | 100 | <- | Minus |
3R | 26059235..26059263 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21884142..21884639 | 105..602 | 99 | <- | Minus |
arm_3R | 21884702..21884776 | 30..104 | 100 | <- | Minus |
arm_3R | 21884957..21884985 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25799251..25799748 | 105..602 | 99 | <- | Minus |
3R | 25799811..25799885 | 30..104 | 100 | <- | Minus |
3R | 25800066..25800094 | 1..29 | 100 | Minus |
Translation from 39 to 527
> FI02850.hyp MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEK LHGITPSRPSERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKI VKALKSQREALVKPVKKVVEKKPVKAAAKKPAGKAAGKPGAKVAGKKPAP KGAPKGVVKSKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL34a-PC | 162 | CG6090-PC | 1..162 | 1..162 | 827 | 100 | Plus |
RpL34a-PB | 162 | CG6090-PB | 1..162 | 1..162 | 827 | 100 | Plus |
RpL34a-PA | 162 | CG6090-PA | 1..162 | 1..162 | 827 | 100 | Plus |
RpL34b-PD | 168 | CG9354-PD | 1..162 | 1..153 | 618 | 82.7 | Plus |
RpL34b-PC | 168 | CG9354-PC | 1..162 | 1..153 | 618 | 82.7 | Plus |
Translation from 39 to 527
> FI02850.pep MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEK LHGITPSRPSERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKI VKALKSQREALVKPVKKVVEKKPVKAAAKKPAGKAAGKPGAKVAGKKPAP KGAPKGVVKSKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17768-PA | 167 | GF17768-PA | 1..115 | 1..115 | 554 | 94.8 | Plus |
Dana\GF18218-PA | 157 | GF18218-PA | 1..110 | 1..110 | 529 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12199-PA | 162 | GG12199-PA | 1..162 | 1..162 | 784 | 96.9 | Plus |
Dere\GG17378-PA | 168 | GG17378-PA | 1..115 | 1..115 | 583 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18140-PA | 158 | GH18140-PA | 1..155 | 1..155 | 580 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL34a-PC | 162 | CG6090-PC | 1..162 | 1..162 | 827 | 100 | Plus |
RpL34a-PB | 162 | CG6090-PB | 1..162 | 1..162 | 827 | 100 | Plus |
RpL34a-PA | 162 | CG6090-PA | 1..162 | 1..162 | 827 | 100 | Plus |
RpL34b-PD | 168 | CG9354-PD | 1..162 | 1..153 | 618 | 82.7 | Plus |
RpL34b-PC | 168 | CG9354-PC | 1..162 | 1..153 | 618 | 82.7 | Plus |
RpL34b-PA | 168 | CG9354-PA | 1..162 | 1..153 | 618 | 82.7 | Plus |
RpL34b-PB | 168 | CG9354-PB | 1..162 | 1..153 | 618 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22901-PA | 158 | GI22901-PA | 1..158 | 1..162 | 617 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22011-PA | 159 | GL22011-PA | 1..159 | 1..162 | 638 | 89.6 | Plus |
Dper\GL13673-PA | 170 | GL13673-PA | 1..116 | 1..116 | 573 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27345-PA | 159 | GA27345-PA | 1..159 | 1..162 | 638 | 89.6 | Plus |
Dpse\GA26986-PA | 170 | GA26986-PA | 1..116 | 1..116 | 573 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10197-PA | 162 | GM10197-PA | 1..162 | 1..162 | 797 | 98.8 | Plus |
Dsec\GM23916-PA | 130 | GM23916-PA | 1..115 | 1..115 | 578 | 98.3 | Plus |
Dsec\GM26264-PA | 164 | GM26264-PA | 1..111 | 1..115 | 507 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18147-PA | 162 | GD18147-PA | 1..162 | 1..162 | 800 | 99.4 | Plus |
Dsim\GD20801-PA | 168 | GD20801-PA | 1..115 | 1..115 | 580 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23314-PA | 158 | GJ23314-PA | 1..158 | 1..162 | 622 | 85.2 | Plus |