Clone FI02870 Report

Search the DGRC for FI02870

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:28
Well:70
Vector:pFlc-1
Associated Gene/TranscriptJheh2-RA
Protein status:FI02870.pep: gold
Sequenced Size:1636

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Jheh2 2008-08-15 Release 5.9 accounting
Jheh2 2008-12-18 5.12 accounting

Clone Sequence Records

FI02870.complete Sequence

1636 bp assembled on 2008-08-11

GenBank Submission: BT044122.1

> FI02870.complete
GATTTTGTGCTCGACGATCGTAAGCGAGGAGTTGCGCAGTTCGCCGATCT
GTGTATATAGAATATATAAAGAATATAGCATAAACACACAATGGCGAACA
TCTGGCCACGAATCTTGGTCGGAGCTCTGACCATCCTGGTGGCCGTTGGC
TATAAGAACTATCGCGATCTCTCGGCGCCCGGCAAGAGACCCGATCTGGA
CAACAACGCCTACTGGGGTCCAACATTGAAGGAACCTTATCGGGAGAACA
AGGCCATCCTACCCTTCGACATCAGCGTAAAGCCAGAGGTTATTGAGGAT
CTAATCGGTCAGCTGAGTCGTCCTTTGAAAGCGCAGGCGCCACTGGAGGG
TGTGGGTTTCCAATACGGATTCAATGCCAACGAACTGGCCAAGGTGGTGA
AATACTGGCGCGATACATATCTGCCCAAATGGAGCGAACGGGAGGAGTAC
CTCAAGAAGCTGGATCACTACCAAACGGAAATTCAGGGTTTAAAAATTCA
TTTTATTCATGCCAAGCCAAGCCAGGTGAAAGGCCAAAAGCCCAAGAAGG
TGCTGCCTCTGCTTCTGATGCACGGATGGCCGGGAACCGTTCGCGAATTC
TACGACTTCATCCCTCTCCTGACCACGCCCAGTGACAAGAGCGACTACGT
CTTCGAGGTTATTGCACCCAGTCTGCCCGGCTACGGATGGTCTCAGGGCT
CTTCAAAAACTGGATTCGGTGTGGCGCAAGTGGCGGTGGTGATGCGCAAC
CTGATGCTCCGAGTGGGATTCGATAAGTTTCTGGTGCAGGGTGGCGATTG
GGGTTCCATAATTGGATCCAATGTAGCCTCACTTTTTCCGGAAAACGTGC
TGGGCTATCATTCTAATATGTGCGGAAATAACAGCCCTATGGGTCAGTTG
AAGATGGTGCTGGCCTCCTTTTTCCCCAGCTGGTTTGTGGACAGCGAGTA
TGCGGACTTCTACAAGGGACTCGGTCACTTGTTTAGCACCATAATGGAGG
AGATGGGCTATGCCCACATTCAGGCCTCCAAGCCAGACACCATCGGCAAT
GCTTTGATCGACAATCCAACTGGTCTGGCTAGCTATATTCTGGAGAAGTT
CTCCACATGGACGAATACGGCATTTAGATCGCTTCCTGACGGTGGTCTGA
CCAAGAGATTTACCTACGATCAGCTTCTGGACAATGTGATGATCTATTAT
GTGACCAACTCCATTACCACCTCCATGCGTCTGTATTCCGAATCAATGGT
TGCCTCGCAGTTTGCACTGGCCGTGGACTCCGTGCCCATCAAGGCCAAGG
CTGGCTGCACCCGTTTCGCCCATGAGATCACACATTTCTCCGACTCGGTT
TTGGCCAACAAGTTCCCCAATCTGGTGCACAGTACCCACCACCGGGATGG
AGGTCACTTTCCCGCTTTTGAGCTGCCCCAGCAGCTGTACGACGACTTTG
TGTCTTTTGTCCAGAAAGCCAATTTCTCATAAAACAAAATTGTTTATCAT
TAGTTATAGAAGTCCATTGTACATTTTCATCGTGATTCTTGAAAGAAACG
GTTATGTTTGTTGCAAAAATTAAATCAAATCGACTTGGTGATTGTATTTG
CCTTATCTGCTTTGAAAACCGAAAAAAAAAAAAAAA

FI02870.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:06:52
Subject Length Description Subject Range Query Range Score Percent Strand
Jheh2-RA 1896 Jheh2-RA 127..1747 4..1624 8105 100 Plus
Jheh2-RC 1411 Jheh2-RC 486..1411 696..1621 4630 100 Plus
Jheh2-RC 1411 Jheh2-RC 2..486 4..488 2425 100 Plus
Jheh1-RA 1646 Jheh1-RA 1242..1306 1177..1241 160 83 Plus
Jheh1-RA 1646 Jheh1-RA 1057..1111 992..1046 140 83.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:52:58
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 14742897..14743824 1621..694 4595 99.7 Minus
chr2R 21145070 chr2R 14744785..14745071 290..4 1435 100 Minus
chr2R 21145070 chr2R 14744017..14744226 697..488 1050 100 Minus
chr2R 21145070 chr2R 14744338..14744539 488..287 1010 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:09:02 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:52:56
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18855764..18856694 1624..694 4655 100 Minus
2R 25286936 2R 18857651..18857937 290..4 1435 100 Minus
2R 25286936 2R 18856883..18857092 697..488 1050 100 Minus
2R 25286936 2R 18857204..18857405 488..287 1010 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:25:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 18856963..18857893 1624..694 4655 100 Minus
2R 25260384 2R 18858850..18859136 290..4 1435 100 Minus
2R 25260384 2R 18858082..18858291 697..488 1050 100 Minus
2R 25260384 2R 18858403..18858604 488..287 1010 100 Minus
2R 25260384 2R 18854919..18854983 1241..1177 160 83 Minus
2R 25260384 2R 18855114..18855168 1046..992 140 83.6 Minus
Blast to na_te.dros performed on 2019-03-16 17:52:57 has no hits.

FI02870.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:53:47 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 14742897..14743821 697..1621 99 <- Minus
chr2R 14744018..14744225 489..696 100 <- Minus
chr2R 14744338..14744537 289..488 100 <- Minus
chr2R 14744787..14745072 1..288 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:41:37 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
Jheh2-RA 1..1392 91..1482 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:09:59 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
Jheh2-RA 1..1392 91..1482 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:40:50 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
Jheh2-RA 1..1392 91..1482 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:21 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
Jheh2-RA 1..1392 91..1482 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:21:28 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
Jheh2-RA 1..1392 91..1482 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:49:27 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
Jheh2-RA 2..1619 4..1621 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:09:59 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
Jheh2-RA 2..1619 4..1621 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:40:50 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
Jheh2-RA 1..1621 3..1621 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:29:39 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
Jheh2-RA 2..1619 4..1621 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:21:28 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
Jheh2-RA 1..1621 3..1621 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:53:47 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18855767..18856691 697..1621 100 <- Minus
2R 18856884..18857091 489..696 100 <- Minus
2R 18857204..18857403 289..488 100 <- Minus
2R 18857653..18857938 1..288 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:53:47 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18855767..18856691 697..1621 100 <- Minus
2R 18856884..18857091 489..696 100 <- Minus
2R 18857204..18857403 289..488 100 <- Minus
2R 18857653..18857938 1..288 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:53:47 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18855767..18856691 697..1621 100 <- Minus
2R 18856884..18857091 489..696 100 <- Minus
2R 18857204..18857403 289..488 100 <- Minus
2R 18857653..18857938 1..288 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:40:50 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14744709..14744908 289..488 100 <- Minus
arm_2R 14743272..14744196 697..1621 100 <- Minus
arm_2R 14744389..14744596 489..696 100 <- Minus
arm_2R 14745158..14745443 1..288 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:39:57 Download gff for FI02870.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18856966..18857890 697..1621 100 <- Minus
2R 18858083..18858290 489..696 100 <- Minus
2R 18858403..18858602 289..488 100 <- Minus
2R 18858852..18859137 1..288 99   Minus

FI02870.pep Sequence

Translation from 90 to 1481

> FI02870.pep
MANIWPRILVGALTILVAVGYKNYRDLSAPGKRPDLDNNAYWGPTLKEPY
RENKAILPFDISVKPEVIEDLIGQLSRPLKAQAPLEGVGFQYGFNANELA
KVVKYWRDTYLPKWSEREEYLKKLDHYQTEIQGLKIHFIHAKPSQVKGQK
PKKVLPLLLMHGWPGTVREFYDFIPLLTTPSDKSDYVFEVIAPSLPGYGW
SQGSSKTGFGVAQVAVVMRNLMLRVGFDKFLVQGGDWGSIIGSNVASLFP
ENVLGYHSNMCGNNSPMGQLKMVLASFFPSWFVDSEYADFYKGLGHLFST
IMEEMGYAHIQASKPDTIGNALIDNPTGLASYILEKFSTWTNTAFRSLPD
GGLTKRFTYDQLLDNVMIYYVTNSITTSMRLYSESMVASQFALAVDSVPI
KAKAGCTRFAHEITHFSDSVLANKFPNLVHSTHHRDGGHFPAFELPQQLY
DDFVSFVQKANFS*

FI02870.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:30:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13743-PA 462 GF13743-PA 1..462 1..462 2111 82.5 Plus
Dana\GF13742-PA 462 GF13742-PA 1..462 1..462 2017 79.7 Plus
Dana\GF13744-PA 474 GF13744-PA 3..463 8..458 1290 53.8 Plus
Dana\GF13741-PA 468 GF13741-PA 9..459 8..459 1153 48.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:30:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20934-PA 463 GG20934-PA 1..463 1..463 2261 90.3 Plus
Dere\GG20936-PA 474 GG20936-PA 6..463 7..458 1268 53.6 Plus
Dere\GG20933-PA 468 GG20933-PA 9..459 8..459 1137 47.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:30:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19729-PA 462 GH19729-PA 4..460 1..460 1879 74.8 Plus
Dgri\GH19730-PA 474 GH19730-PA 6..465 7..460 1230 52.3 Plus
Dgri\GH19728-PA 463 GH19728-PA 9..457 8..457 1117 47.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:14:35
Subject Length Description Subject Range Query Range Score Percent Strand
Jheh2-PD 463 CG15102-PD 1..463 1..463 2458 100 Plus
Jheh2-PA 463 CG15102-PA 1..463 1..463 2458 100 Plus
Jheh1-PA 474 CG15101-PA 6..463 7..458 1286 54.7 Plus
Jheh3-PA 468 CG15106-PA 9..459 8..459 1121 47.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:30:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20153-PA 464 GI20153-PA 10..460 7..460 1904 76 Plus
Dmoj\GI20154-PA 474 GI20154-PA 6..465 7..460 1264 52.9 Plus
Dmoj\GI20152-PA 465 GI20152-PA 9..459 8..459 1130 47 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:30:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10580-PA 325 GL10580-PA 1..322 1..321 1401 80.1 Plus
Dper\GL10582-PA 474 GL10582-PA 6..465 7..460 1252 52.7 Plus
Dper\GL10579-PA 468 GL10579-PA 9..459 8..459 1123 48.1 Plus
Dper\GL10581-PA 117 GL10581-PA 2..117 347..462 535 84.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:30:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13493-PA 463 GA13493-PA 1..463 1..462 2102 83.2 Plus
Dpse\GA13492-PA 474 GA13492-PA 6..465 7..460 1244 52.3 Plus
Dpse\GA13496-PA 468 GA13496-PA 9..459 8..459 1114 47.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:30:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19862-PA 463 GM19862-PA 1..463 1..463 2452 98.5 Plus
Dsec\Jheh1-PA 474 GM19863-PA 6..463 7..458 1291 54.7 Plus
Dsec\Jheh3-PA 468 GM19861-PA 9..459 8..459 1135 47.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:30:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25349-PA 463 GD25349-PA 1..463 1..463 2459 98.7 Plus
Dsim\Jheh1-PA 474 GD25350-PA 6..463 7..458 1299 54.9 Plus
Dsim\Jheh3-PA 468 GD25348-PA 9..459 8..459 1127 47.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:30:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22430-PA 462 GJ22430-PA 10..460 7..460 1939 77.1 Plus
Dvir\GJ22431-PA 474 GJ22431-PA 6..465 7..460 1234 51.8 Plus
Dvir\GJ22429-PA 466 GJ22429-PA 9..460 8..460 1101 45.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:30:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20692-PA 463 GK20692-PA 10..460 7..460 1951 77.5 Plus
Dwil\GK20693-PA 474 GK20693-PA 6..465 7..460 1287 54 Plus
Dwil\GK20691-PA 467 GK20691-PA 9..459 8..459 1115 47.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:30:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13872-PA 463 GE13872-PA 1..463 1..463 2363 94 Plus
Dyak\GE13873-PA 474 GE13873-PA 6..463 7..458 1278 54.2 Plus
Dyak\GE13871-PA 468 GE13871-PA 9..459 8..459 1131 47.6 Plus

FI02870.hyp Sequence

Translation from 90 to 1481

> FI02870.hyp
MANIWPRILVGALTILVAVGYKNYRDLSAPGKRPDLDNNAYWGPTLKEPY
RENKAILPFDISVKPEVIEDLIGQLSRPLKAQAPLEGVGFQYGFNANELA
KVVKYWRDTYLPKWSEREEYLKKLDHYQTEIQGLKIHFIHAKPSQVKGQK
PKKVLPLLLMHGWPGTVREFYDFIPLLTTPSDKSDYVFEVIAPSLPGYGW
SQGSSKTGFGVAQVAVVMRNLMLRVGFDKFLVQGGDWGSIIGSNVASLFP
ENVLGYHSNMCGNNSPMGQLKMVLASFFPSWFVDSEYADFYKGLGHLFST
IMEEMGYAHIQASKPDTIGNALIDNPTGLASYILEKFSTWTNTAFRSLPD
GGLTKRFTYDQLLDNVMIYYVTNSITTSMRLYSESMVASQFALAVDSVPI
KAKAGCTRFAHEITHFSDSVLANKFPNLVHSTHHRDGGHFPAFELPQQLY
DDFVSFVQKANFS*

FI02870.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:24:31
Subject Length Description Subject Range Query Range Score Percent Strand
Jheh2-PD 463 CG15102-PD 1..463 1..463 2458 100 Plus
Jheh2-PA 463 CG15102-PA 1..463 1..463 2458 100 Plus
Jheh1-PA 474 CG15101-PA 6..463 7..458 1286 54.7 Plus
Jheh3-PA 468 CG15106-PA 9..459 8..459 1121 47.2 Plus