Clone FI02886 Report

Search the DGRC for FI02886

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:28
Well:86
Vector:pFlc-1
Associated Gene/TranscriptCG3597-RA
Protein status:FI02886.pep: gold
Sequenced Size:1240

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3597 2008-12-18 5.12 accounting

Clone Sequence Records

FI02886.complete Sequence

1240 bp assembled on 2008-09-15

GenBank Submission: BT044489.1

> FI02886.complete
GAGTAGCTGCCCGGACACGGGCCCGCGCGAGACTCGACTCGTCGAAAGCA
GAACGGATACCCACATAGCATTCAGCACATCTGGAGTCGTAGCGTCGCAA
TGCAGAGCCAGGCGAATCTGAACTGGGGCATCGCGGCAGCGGGCAGGATA
ACGCAGGACTTTGTCACCGCCCTGGGAACCGTGGAGAAGTCCCGTCACGT
AGTGGTGGCCGTGGCCGATGTGGATGGCCAGCGAGCGCAGCAGTTCGCCC
AGAGGAATCAGATACCCAGGCACTACGATGGTTTCGATGCACTGGCTCTG
GATCGAGAGGTGGAAGTGGTGTATGTGGGCACCCTGAATCCATTCCACTA
CGCTGTCGTCCATCTCATGTTGGCCAGGGGTAAAAACGTGCTCTGTGAGA
CTCCCATGTGCTTGAGCGTGGAGCAGGCCAAGGAGCTGTACACGTTGGCC
GAGCAGCGTGGAGTGTTCCTCATGGAGGGCATGTGGTCACGCTTCTTTCC
TAGCTACGATCGTCTGAGGGAACTCCTGAAAAACGACGTCATTGGGGAGG
TAACCCAGGTTAAGGTACAGCACGGTTTTCGCCTGGCCCATATGGAACGG
GTGTGCAACCGATCTCTGGGCGGTTCGATCCTTATGGACATCGGCATCTA
CGCCCTGCAGCTGGGTCAGTTCGTTTTCGGTGTATCTCCCGTCAAGATCC
TGCCCAGCGGCACGCAGCTCAACAAGGAACGCGTGGATGTGCAGATCGAC
TTTATGCTGGACTATGGCGATGGTCGTCGACTGGTGGCTCTAGTAACCGG
ACTAGAGAATCTGGAAAACGATGCCGTCATCACGGGCACCAAAGGCGAGA
TTAAGCTGTCCAATTACTGGTGCTGCACCCAGATTAGCCGCTCTAATGCT
CCTCCCGAATCCTGGCCTCTGCCGCGGGCCAAATTTGATTTCCACTACAC
GAACACCTGCGGACTGAGATACGAGGCGGAGGAAGTGCGTCGCTGCATAG
AGAAACGCCTGCTCGAGAGTCCCAAATTCACGCATGCCGAAAGTCTAGAG
TTAGCAGCCATTGCGGATGAGATCCGACGGCAAATCGGTGTGGTATATGA
TGTGTGAGCTGTGAAGAAGTCTTAGTAATTAATAAATAATTGAATTACAT
CATCAATACTTGTTACAATAACCAAGTTGAATCTACAAACTATCTTTAAA
ATACAATGATACTTCATACGACACAAAAAAAAAAAAAAAA

FI02886.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:01:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG3597-RA 1731 CG3597-RA 502..1726 2..1226 6125 100 Plus
CG3597.a 1245 CG3597.a 1..856 2..857 4280 100 Plus
CG3597.b 1229 CG3597.b 484..1229 479..1224 3730 100 Plus
CG3597.b 1229 CG3597.b 1..478 2..479 2390 100 Plus
CG3597.a 1245 CG3597.a 875..1245 854..1224 1855 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2370756..2371233 479..2 2390 100 Minus
chr2L 23010047 chr2L 2370321..2370698 855..478 1860 99.5 Minus
chr2L 23010047 chr2L 2369861..2370231 1224..854 1780 98.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:09:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:51:25
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2371047..2371524 479..2 2390 100 Minus
2L 23513712 2L 2370612..2370989 855..478 1890 100 Minus
2L 23513712 2L 2370150..2370522 1226..854 1865 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:19:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2371047..2371524 479..2 2390 100 Minus
2L 23513712 2L 2370612..2370989 855..478 1890 100 Minus
2L 23513712 2L 2370150..2370522 1226..854 1865 100 Minus
Blast to na_te.dros performed on 2019-03-16 10:51:26 has no hits.

FI02886.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:52:11 Download gff for FI02886.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2369861..2370229 856..1224 98 <- Minus
chr2L 2370321..2370697 479..855 99 <- Minus
chr2L 2370757..2371233 1..478 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:41:54 Download gff for FI02886.complete
Subject Subject Range Query Range Percent Splice Strand
CG3597-RA 1..1008 100..1107 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:01:23 Download gff for FI02886.complete
Subject Subject Range Query Range Percent Splice Strand
CG3597-RA 1..1008 100..1107 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:04:32 Download gff for FI02886.complete
Subject Subject Range Query Range Percent Splice Strand
CG3597-RA 1..1008 100..1107 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:18:29 Download gff for FI02886.complete
Subject Subject Range Query Range Percent Splice Strand
CG3597-RA 1..1008 100..1107 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:19:45 Download gff for FI02886.complete
Subject Subject Range Query Range Percent Splice Strand
CG3597-RA 1..1219 2..1220 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:01:22 Download gff for FI02886.complete
Subject Subject Range Query Range Percent Splice Strand
CG3597-RA 1..1223 2..1224 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:04:32 Download gff for FI02886.complete
Subject Subject Range Query Range Percent Splice Strand
CG3597-RA 1..1223 2..1224 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 12:13:36 Download gff for FI02886.complete
Subject Subject Range Query Range Percent Splice Strand
CG3597-RA 1..1219 2..1220 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:18:29 Download gff for FI02886.complete
Subject Subject Range Query Range Percent Splice Strand
CG3597-RA 1..1223 2..1224 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:52:11 Download gff for FI02886.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2370152..2370520 856..1224 100 <- Minus
2L 2370612..2370988 479..855 100 <- Minus
2L 2371048..2371524 1..478 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:52:11 Download gff for FI02886.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2370152..2370520 856..1224 100 <- Minus
2L 2370612..2370988 479..855 100 <- Minus
2L 2371048..2371524 1..478 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:52:11 Download gff for FI02886.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2370152..2370520 856..1224 100 <- Minus
2L 2370612..2370988 479..855 100 <- Minus
2L 2371048..2371524 1..478 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:04:32 Download gff for FI02886.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2370152..2370520 856..1224 100 <- Minus
arm_2L 2370612..2370988 479..855 100 <- Minus
arm_2L 2371048..2371524 1..478 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:28:46 Download gff for FI02886.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2370152..2370520 856..1224 100 <- Minus
2L 2370612..2370988 479..855 100 <- Minus
2L 2371048..2371524 1..478 99   Minus

FI02886.pep Sequence

Translation from 99 to 1106

> FI02886.pep
MQSQANLNWGIAAAGRITQDFVTALGTVEKSRHVVVAVADVDGQRAQQFA
QRNQIPRHYDGFDALALDREVEVVYVGTLNPFHYAVVHLMLARGKNVLCE
TPMCLSVEQAKELYTLAEQRGVFLMEGMWSRFFPSYDRLRELLKNDVIGE
VTQVKVQHGFRLAHMERVCNRSLGGSILMDIGIYALQLGQFVFGVSPVKI
LPSGTQLNKERVDVQIDFMLDYGDGRRLVALVTGLENLENDAVITGTKGE
IKLSNYWCCTQISRSNAPPESWPLPRAKFDFHYTNTCGLRYEAEEVRRCI
EKRLLESPKFTHAESLELAAIADEIRRQIGVVYDV*

FI02886.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:39:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15279-PA 336 GF15279-PA 1..334 1..334 1610 91.3 Plus
Dana\GF15278-PA 335 GF15278-PA 5..329 7..332 691 41.7 Plus
Dana\GF14543-PA 491 GF14543-PA 99..419 7..331 549 38.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:39:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24526-PA 335 GG24526-PA 1..335 1..335 1707 93.1 Plus
Dere\GG24525-PA 335 GG24525-PA 5..333 7..334 709 42.4 Plus
Dere\GG20106-PA 472 GG20106-PA 92..412 7..331 576 39.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:39:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13784-PA 340 GH13784-PA 1..333 1..334 1482 80.5 Plus
Dgri\GH13782-PA 337 GH13782-PA 1..335 1..334 675 40.5 Plus
Dgri\GH13961-PA 219 GH13961-PA 5..217 123..334 419 39.7 Plus
Dgri\GH13776-PA 145 GH13776-PA 5..59 86..140 143 47.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG3597-PA 335 CG3597-PA 1..335 1..335 1739 100 Plus
CG3597-PB 337 CG3597-PB 1..337 1..335 1726 99.4 Plus
CG3609-PC 335 CG3609-PC 5..329 7..332 670 42 Plus
CG3609-PB 335 CG3609-PB 5..329 7..332 670 42 Plus
CG3609-PA 335 CG3609-PA 5..329 7..332 670 42 Plus
CG13280-PB 419 CG13280-PB 38..358 7..331 556 39.4 Plus
CG13280-PA 473 CG13280-PA 92..412 7..331 556 39.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:39:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17187-PA 340 GI17187-PA 1..333 1..334 1477 80.5 Plus
Dmoj\GI17186-PA 337 GI17186-PA 1..335 1..334 658 40.5 Plus
Dmoj\GI17180-PA 361 GI17180-PA 22..331 2..315 482 34.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:39:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19399-PA 336 GL19399-PA 1..334 1..334 1573 85 Plus
Dper\GL19398-PA 335 GL19398-PA 5..329 7..332 694 41.1 Plus
Dper\GL19331-PA 412 GL19331-PA 50..369 7..331 540 37.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:39:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17547-PA 336 GA17547-PA 1..334 1..334 1573 85 Plus
Dpse\GA17556-PA 335 GA17556-PA 5..329 7..332 694 41.1 Plus
Dpse\GA12167-PA 460 GA12167-PA 98..417 7..331 539 37.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:39:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18234-PA 335 GM18234-PA 1..335 1..335 1779 98.5 Plus
Dsec\GM18233-PA 335 GM18233-PA 5..333 7..334 709 43 Plus
Dsec\GM17156-PA 467 GM17156-PA 81..407 1..331 569 39 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:39:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22840-PA 335 GD22840-PA 1..335 1..335 1775 98.5 Plus
Dsim\GD22839-PA 312 GD22839-PA 5..310 7..334 612 40 Plus
Dsim\GD11964-PA 418 GD11964-PA 32..358 1..331 577 39.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:39:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22215-PA 340 GJ22215-PA 1..333 1..334 1478 79.3 Plus
Dvir\GJ22204-PA 337 GJ22204-PA 1..335 1..334 705 42.9 Plus
Dvir\GJ22128-PA 325 GJ22128-PA 1..309 17..329 470 33.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:39:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14983-PA 338 GK14983-PA 1..338 1..335 1462 77.5 Plus
Dwil\GK14982-PA 334 GK14982-PA 5..333 7..334 698 41.5 Plus
Dwil\GK16411-PA 336 GK16411-PA 6..334 7..334 658 41.5 Plus
Dwil\GK18155-PA 462 GK18155-PA 71..393 4..331 581 38.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:39:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15120-PA 335 GE15120-PA 1..335 1..335 1686 95.5 Plus
Dyak\GE15118-PA 335 GE15118-PA 5..333 7..334 715 42.7 Plus
Dyak\GE13162-PA 472 GE13162-PA 89..412 4..331 565 38.8 Plus

FI02886.hyp Sequence

Translation from 99 to 1106

> FI02886.hyp
MQSQANLNWGIAAAGRITQDFVTALGTVEKSRHVVVAVADVDGQRAQQFA
QRNQIPRHYDGFDALALDREVEVVYVGTLNPFHYAVVHLMLARGKNVLCE
TPMCLSVEQAKELYTLAEQRGVFLMEGMWSRFFPSYDRLRELLKNDVIGE
VTQVKVQHGFRLAHMERVCNRSLGGSILMDIGIYALQLGQFVFGVSPVKI
LPSGTQLNKERVDVQIDFMLDYGDGRRLVALVTGLENLENDAVITGTKGE
IKLSNYWCCTQISRSNAPPESWPLPRAKFDFHYTNTCGLRYEAEEVRRCI
EKRLLESPKFTHAESLELAAIADEIRRQIGVVYDV*

FI02886.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:24:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG3597-PA 335 CG3597-PA 1..335 1..335 1739 100 Plus
CG3597-PB 337 CG3597-PB 1..337 1..335 1726 99.4 Plus
CG3609-PC 335 CG3609-PC 5..329 7..332 670 42 Plus
CG3609-PB 335 CG3609-PB 5..329 7..332 670 42 Plus
CG3609-PA 335 CG3609-PA 5..329 7..332 670 42 Plus