Clone FI02890 Report

Search the DGRC for FI02890

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:28
Well:90
Vector:pFlc-1
Associated Gene/TranscriptCG17734-RB
Protein status:FI02890.pep: gold
Sequenced Size:1020

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17734 2008-08-15 Release 5.9 accounting
CG17734 2008-12-18 5.12 accounting

Clone Sequence Records

FI02890.complete Sequence

1020 bp assembled on 2008-07-08

GenBank Submission: BT044126.1

> FI02890.complete
GACACATTGCTCGAACTGCTGTCGATTGCAGAAAGTTTCGCGAACGTTGC
CAAGCGATTAAACCGATCCGAACCGCCCGCGTACATAATATAATATTCGT
GAAAATGAGTTCCAAGTCCCTTTTCGACAGCGAGGAGGATGCCGCTCAGG
CCAACAAATTATCCAGGAAAGCAAAGGAATCGCCCTTCATGCTTGTGGGT
ATTACCGGATTCGTGGCCGCCGGATTGATTGGAGCGTACAAGTACCGGAA
CCGCGGAACGATGAGCACCAGCGTCTTCCTGATGCAGCTGCGAGTCGCCG
CCCAGGGAACCGTCGTCGGATGTCTGACCCTCGGACTGGCCTACAGCATG
GCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAAAAGTAATGGACAGT
TCCTACTTAGTTAATACTAGCTGTAGCTTAAGTTGTTTTAACCGCGTACA
GAAAGAATCCTGAATCCCAATCCCAATTGAATCCCCAATACAATTGTTTC
ATATTTATGTCTATTTCCAAATGCTTTCGGTTTCCACATGTCTATTAACA
TTCACTGAAACGCATATTCCCATATTCATGACTGTCTATTTAGTTTTCAT
ACGTTTTGATTTATTTATTTCCCCTATTTGATTTACTCTTAATTTTAGCA
CAAAGTCATTGACTAACTAAAGACCATCTGATTGCTCGGCGTCCCTCTCT
AAAAATCACAAGATGACATCGGCTAGATCACTTACACATAAGCAATCAGA
CCCTCTATTTATTGCATCATCATGGTTCATACCGATCCACTTGGATAGAA
TCACTGGAGGGCAGGACTCTCGCAAGTATTCCCGAGCGTTCAAGCCCACA
ACATTAGATACAGTTTTGTAAACCTGCGTAAGATTGTGATATTGTGTGTT
TTAATGTACAAGTTGAACATCCAAACGAAAGCTGTCGAAGCAGACGACAA
GATGATAAATACCTCTCGCATGATATGATATACTTAAATAAATCAATTTA
GACTAAAAAAAAAAAAAAAA

FI02890.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:03:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG17734-RB 1185 CG17734-RB 131..1141 2..1012 5025 99.8 Plus
CG17734-RA 992 CG17734-RA 198..584 2..388 1920 99.7 Plus
CG17734-RA 992 CG17734-RA 585..948 649..1012 1805 99.7 Plus
CG11825.a 663 CG11825.a 111..384 102..375 710 83.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:37:31
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 7067782..7068588 1004..198 4005 99.8 Minus
chr3R 27901430 chr3R 7069354..7069552 200..2 935 98 Minus
chr2R 21145070 chr2R 6308193..6308466 375..102 710 83.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:09:12 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:37:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11242200..11243014 1012..198 4060 99.9 Minus
3R 32079331 3R 11243780..11243978 200..2 980 99.5 Minus
2R 25286936 2R 10420733..10421006 375..102 710 83.9 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:22:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 10983031..10983845 1012..198 4060 99.8 Minus
3R 31820162 3R 10984611..10984809 200..2 980 99.4 Minus
2R 25260384 2R 10421932..10422205 375..102 710 83.9 Minus
Blast to na_te.dros performed 2019-03-16 01:37:30
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy5 7369 gypsy5 GYPSY5 7369bp 5250..5331 665..583 124 62.7 Minus
Doc3-element 4740 Doc3-element DOC3 4740bp 56..135 653..574 121 61.3 Minus

FI02890.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:38:28 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 7067782..7068587 199..1004 99 <- Minus
chr3R 7069356..7069552 1..198 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:41:58 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
CG17734-RB 1..288 105..392 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:05:15 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
CG17734-RB 1..288 105..392 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:08:10 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
CG17734-RB 1..288 105..392 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:52:36 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
CG17734-RB 1..288 105..392 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:38:30 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
CG17734-RB 1..288 105..392 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:28:09 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
CG17734-RB 1..1001 4..1004 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:05:15 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
CG17734-RB 1..1003 2..1004 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:08:10 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
CG17734-RB 21..1024 1..1004 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:52:36 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
CG17734-RB 1..1001 4..1004 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:38:30 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
CG17734-RB 21..1024 1..1004 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:38:28 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11242208..11243013 199..1004 100 <- Minus
3R 11243782..11243978 1..198 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:38:28 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11242208..11243013 199..1004 100 <- Minus
3R 11243782..11243978 1..198 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:38:28 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11242208..11243013 199..1004 100 <- Minus
3R 11243782..11243978 1..198 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:08:10 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7067930..7068735 199..1004 100 <- Minus
arm_3R 7069504..7069700 1..198 98   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:33:51 Download gff for FI02890.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10983039..10983844 199..1004 100 <- Minus
3R 10984613..10984809 1..198 98   Minus

FI02890.hyp Sequence

Translation from 2 to 391

> FI02890.hyp
HIARTAVHCRKFRERCQAIKPIRTARVHNIIFVKMSSKSLFDSEEDAAQA
NKLSRKAKESPFMLVGITGFVAAGLIGAYKYRNRGTMSTSVFLMQLRVAA
QGTVVGCLTLGLAYSMAKEYLFDKAPKEK*

FI02890.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:24:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG17734-PB 95 CG17734-PB 1..95 35..129 470 100 Plus
CG17734-PA 101 CG17734-PA 1..94 35..128 465 100 Plus
CG11825-PC 136 CG11825-PC 4..129 1..127 412 68.5 Plus
CG11825-PA 100 CG11825-PA 1..93 35..127 398 84.9 Plus
CG11825-PD 72 CG11825-PD 1..65 63..127 286 87.7 Plus

FI02890.pep Sequence

Translation from 2 to 391

> FI02890.pep
HIARTAVDCRKFRERCQAIKPIRTARVHNIIFVKMSSKSLFDSEEDAAQA
NKLSRKAKESPFMLVGITGFVAAGLIGAYKYRNRGTMSTSVFLMQLRVAA
QGTVVGCLTLGLAYSMAKEYLFDKAPKEK*

FI02890.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:59:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18164-PA 101 GF18164-PA 1..95 35..129 447 88.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:59:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17229-PA 101 GG17229-PA 1..95 35..129 484 97.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:59:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18805-PA 101 GH18805-PA 1..95 35..129 446 89.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:24:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG17734-PB 95 CG17734-PB 1..95 35..129 470 100 Plus
CG17734-PA 101 CG17734-PA 1..94 35..128 465 100 Plus
CG11825-PC 136 CG11825-PC 4..129 1..127 412 68.5 Plus
CG11825-PA 100 CG11825-PA 1..93 35..127 398 84.9 Plus
CG11825-PD 72 CG11825-PD 1..65 63..127 286 87.7 Plus
CG17734-PC 106 CG17734-PC 1..32 35..66 154 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:59:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10064-PA 95 GI10064-PA 1..95 35..129 434 85.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:59:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12612-PA 100 GL12612-PA 1..93 35..128 416 86.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:59:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14631-PA 100 GA14631-PA 1..93 35..128 416 86.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:59:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26107-PA 101 GM26107-PA 1..95 35..129 477 95.8 Plus
Dsec\GM20525-PA 100 GM20525-PA 1..93 35..127 427 86 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:59:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20668-PA 101 GD20668-PA 1..95 35..129 481 96.8 Plus
Dsim\GD10739-PA 100 GD10739-PA 1..93 35..127 419 84.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:59:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23799-PA 101 GJ23799-PA 1..95 35..129 440 85.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:59:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13290-PA 102 GK13290-PA 5..95 38..128 426 86.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:59:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24630-PA 101 GE24630-PA 1..95 35..129 479 96.8 Plus