Clone FI03211 Report

Search the DGRC for FI03211

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:32
Well:11
Vector:pFlc-1
Associated Gene/Transcriptspn-B-RA
Protein status:FI03211.pep: gold
Sequenced Size:1388

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
spn-B 2008-08-15 Release 5.9 accounting
spn-B 2008-12-18 5.12 accounting

Clone Sequence Records

FI03211.complete Sequence

1388 bp assembled on 2008-08-06

GenBank Submission: BT044133.1

> FI03211.complete
AATTCGCTCGCAAGTCGTCGCATGGCTCGGCTGTTTGATCAATAATCCCC
CGGAATACTTCCAATTCCGGAGGTGTTGAGACACCTTTCGTGTTTCGGGG
AGCCATTATATCACGCAATCCCATCGAGGACATGCCATCGCATCGCGATG
ACAAACTTTCTGGATCAATTGCCCAAGCATATCAGAGAAATCGCCGAGCA
GGTTAATGTTCTCGCACCGGAGGAGGTGCTGACAACTCCCAAGGTGCGAT
TCCTGGACACCCGCCAGCAATCGCTGCACACAATCGTGCGAAAATGCACT
CCGGATGATGTTAGGGTGCTCAAGGATGCGGCAGCCAAGTGGCTGGCAGA
GATGCCCCAGTCAGCGGATTCCCTCTTCAAGCCGCTTGTCAATGTTAGAT
GGTCGCGGGTGTCGTTTGGATGTTCCGCTTTAGATCGCTGCACGGGCGGG
GGAGTGGTCACTCGTGGAATTACAGAGCTATGTGGAGCAGCCGGCGTGGG
CAAGACCCAGTTGCTTCTTCAGCTATCCCTTTGTGTCCAGCTACCCCGTG
AGTTGGGTGGCTTGGGCAAAGGCGTGGCCTACATATGCACGGAGAGTTCC
TTTCCGGCGAGAAGATTGCTGCAGATGAGCAAAGCCTGCGAGAAGAGGCA
TCCCGAAATGGAGCTGAATTTTCTGGGAAACATCTTTGTGGAAAATCACA
TTGAGGCAGAACCTCTCCTGGCGTGCGTTATAAACCGCATTCCGCGACTG
ATGCAACAACATGGCATTGGCCTGATCATTATTGATTCTGTGGCCGCCAT
ATTCCGGCTGTATAATGATTATCTGGAACGAGCGAGACATATGCGTCGAC
TGGCAGACGCTCTGCTCAGCTACGCGGATAAGTACAACTGTGCCGTGGTC
TGTGTGAATCAGGTGGCCACCAGGGACGGTCAGGATGAGATTCCCTGCTT
GGGATTGCAGTGGGCGCACCTAGGACGCACTAGACTGCGTGTTTCCCGGG
TGCCCAAGCAGCATCGCATGGGTGATCAACTGATAACGGTGCGCAAACTG
GAAATACTTTACTCACCAGAGACTCCCAATGATTTCGCCGAGTTTCTTAT
CACCGCAGAAGGTGTGGTCAATGTTCCAGAGCCATCTGTTCCCAGCCCAC
CCGCCAAAATGCGTCGACTGTGATTGATTGAATTTATTCTGTTTATTTTG
TTATCGTTTAATTTGTTGAATTTAAAATGTGTAACGGCGGAGCGTTCAAT
TAGCCATACGATTGTCTTATACTCCTGTTAAATTCAGCGGAATATTTTAG
GGTTTAATAATTTAAATTTACTTAGTTGCCAATCAGGTTTAGGTATCATT
AAAATATATAAAAACAAATTCAAAAAAAAAAAAAAAAA

FI03211.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:52:32
Subject Length Description Subject Range Query Range Score Percent Strand
spn-B-RA 1554 spn-B-RA 168..1544 1..1377 6855 99.8 Plus
spn-B.b 1536 spn-B.b 165..1534 1..1370 6850 100 Plus
spn-B.a 1202 spn-B.a 96..1134 1..1039 5195 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:21:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 10153762..10154423 709..1370 3295 99.8 Plus
chr3R 27901430 chr3R 10153362..10153709 362..709 1740 100 Plus
chr3R 27901430 chr3R 10152880..10153085 1..206 1015 99.5 Plus
chr3R 27901430 chr3R 10153141..10153310 202..371 820 98.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:09:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:21:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14328946..14329614 709..1377 3315 99.7 Plus
3R 32079331 3R 14328546..14328893 362..709 1740 100 Plus
3R 32079331 3R 14328064..14328269 1..206 1015 99.5 Plus
3R 32079331 3R 14328325..14328494 202..371 820 98.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:49:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 14069777..14070445 709..1377 3315 99.7 Plus
3R 31820162 3R 14069377..14069724 362..709 1740 100 Plus
3R 31820162 3R 14068895..14069100 1..206 1015 99.5 Plus
3R 31820162 3R 14069156..14069325 202..371 820 98.8 Plus
Blast to na_te.dros performed 2019-03-16 11:21:57
Subject Length Description Subject Range Query Range Score Percent Strand
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 5252..5299 1230..1182 134 77.6 Minus

FI03211.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:22:52 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 10152880..10153081 1..202 100 -> Plus
chr3R 10153142..10153303 203..364 100 -> Plus
chr3R 10153365..10153708 365..708 100 -> Plus
chr3R 10153762..10154423 709..1371 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:42:45 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
spn-B-RA 1..1026 148..1173 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:39:36 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
spn-B-RA 1..1026 148..1173 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:45:21 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
spn-B-RA 1..1026 148..1173 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:17:54 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
spn-B-RA 1..1026 148..1173 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:14:15 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
spn-B-RA 1..1026 148..1173 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:09:15 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
spn-B-RA 1..1370 1..1371 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:39:36 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
spn-B-RA 1..1370 1..1371 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:45:21 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
spn-B-RA 14..1383 1..1371 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-06 16:09:14 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
spn-B-RA 1..1370 1..1371 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:14:15 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
spn-B-RA 14..1383 1..1371 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:22:52 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14328064..14328265 1..202 100 -> Plus
3R 14328326..14328487 203..364 100 -> Plus
3R 14328549..14328892 365..708 100 -> Plus
3R 14328946..14329607 709..1371 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:22:52 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14328064..14328265 1..202 100 -> Plus
3R 14328326..14328487 203..364 100 -> Plus
3R 14328549..14328892 365..708 100 -> Plus
3R 14328946..14329607 709..1371 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:22:52 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14328064..14328265 1..202 100 -> Plus
3R 14328326..14328487 203..364 100 -> Plus
3R 14328549..14328892 365..708 100 -> Plus
3R 14328946..14329607 709..1371 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:45:21 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10153786..10153987 1..202 100 -> Plus
arm_3R 10154048..10154209 203..364 100 -> Plus
arm_3R 10154271..10154614 365..708 100 -> Plus
arm_3R 10154668..10155329 709..1371 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:21:48 Download gff for FI03211.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14069380..14069723 365..708 100 -> Plus
3R 14069777..14070438 709..1371 99   Plus
3R 14069157..14069318 203..364 100 -> Plus
3R 14068895..14069096 1..202 100 -> Plus

FI03211.pep Sequence

Translation from 147 to 1172

> FI03211.pep
MTNFLDQLPKHIREIAEQVNVLAPEEVLTTPKVRFLDTRQQSLHTIVRKC
TPDDVRVLKDAAAKWLAEMPQSADSLFKPLVNVRWSRVSFGCSALDRCTG
GGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYICTES
SFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPR
LMQQHGIGLIIIDSVAAIFRLYNDYLERARHMRRLADALLSYADKYNCAV
VCVNQVATRDGQDEIPCLGLQWAHLGRTRLRVSRVPKQHRMGDQLITVRK
LEILYSPETPNDFAEFLITAEGVVNVPEPSVPSPPAKMRRL*

FI03211.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:07:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17509-PA 345 GF17509-PA 1..341 1..339 1230 68.7 Plus
Dana\GF23286-PA 234 GF23286-PA 6..212 86..284 213 29 Plus
Dana\GF16205-PA 334 GF16205-PA 94..333 87..328 181 28.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:07:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16853-PA 341 GG16853-PA 1..341 1..341 1765 97.1 Plus
Dere\GG11967-PA 335 GG11967-PA 29..334 28..328 190 27.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:07:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17480-PA 349 GH17480-PA 1..334 1..329 1266 68.6 Plus
Dgri\GH18396-PA 352 GH18396-PA 112..350 88..328 189 30.5 Plus
Dgri\GH17957-PA 246 GH17957-PA 18..196 87..257 148 26.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:20:21
Subject Length Description Subject Range Query Range Score Percent Strand
spn-B-PA 341 CG3325-PA 1..341 1..341 1768 100 Plus
spn-D-PA 270 CG31069-PA 44..255 86..289 188 28.8 Plus
spn-A-PB 279 CG7948-PB 41..278 87..328 185 30.9 Plus
spn-A-PA 336 CG7948-PA 98..335 87..328 185 30.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:07:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22807-PA 345 GI22807-PA 1..338 1..333 1209 67.8 Plus
Dmoj\GI23388-PA 347 GI23388-PA 107..345 88..328 183 30.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:07:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23505-PA 348 GL23505-PA 1..348 1..341 1503 79.3 Plus
Dper\GL13479-PA 335 GL13479-PA 95..333 88..328 173 28.9 Plus
Dper\GL23908-PA 191 GL23908-PA 3..171 124..284 158 28.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:07:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17378-PA 348 GA17378-PA 1..348 1..341 1503 79.6 Plus
Dpse\GA15983-PA 254 GA15983-PA 29..234 87..284 247 31.6 Plus
Dpse\GA20711-PA 335 GA20711-PA 95..333 88..328 173 28.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:07:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24163-PA 341 GM24163-PA 1..341 1..341 1789 98.5 Plus
Dsec\GM10376-PA 270 GM10376-PA 44..255 86..289 193 28.8 Plus
Dsec\GM12184-PA 336 GM12184-PA 30..335 28..328 191 27.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 02:08:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18959-PA 341 GD18959-PA 1..341 1..341 1795 98.8 Plus
Dsim\GD21329-PA 267 GD21329-PA 44..255 86..289 192 28.8 Plus
Dsim\GD17366-PA 336 GD17366-PA 30..335 28..328 190 27.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:08:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22809-PA 349 GJ22809-PA 1..337 1..332 1226 68.8 Plus
Dvir\GJ10382-PA 351 GJ10382-PA 111..349 88..328 187 30.5 Plus
Dvir\GJ16038-PA 245 GJ16038-PA 17..194 88..259 180 28.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 02:08:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10943-PA 349 GK10943-PA 3..349 2..341 1377 73.2 Plus
Dwil\GK13420-PA 355 GK13420-PA 115..353 88..328 173 28.9 Plus
Dwil\GK13653-PA 269 GK13653-PA 15..163 80..221 150 32.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 02:08:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24233-PA 341 GE24233-PA 1..341 1..341 1683 95.6 Plus
Dyak\GE23416-PA 335 GE23416-PA 29..334 28..328 191 27.9 Plus
Dyak\GE23723-PA 406 GE23723-PA 180..391 86..289 191 28.3 Plus

FI03211.hyp Sequence

Translation from 147 to 1172

> FI03211.hyp
MTNFLDQLPKHIREIAEQVNVLAPEEVLTTPKVRFLDTRQQSLHTIVRKC
TPDDVRVLKDAAAKWLAEMPQSADSLFKPLVNVRWSRVSFGCSALDRCTG
GGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYICTES
SFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPR
LMQQHGIGLIIIDSVAAIFRLYNDYLERARHMRRLADALLSYADKYNCAV
VCVNQVATRDGQDEIPCLGLQWAHLGRTRLRVSRVPKQHRMGDQLITVRK
LEILYSPETPNDFAEFLITAEGVVNVPEPSVPSPPAKMRRL*

FI03211.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:26:15
Subject Length Description Subject Range Query Range Score Percent Strand
spn-B-PA 341 CG3325-PA 1..341 1..341 1768 100 Plus
spn-D-PA 270 CG31069-PA 44..255 86..289 188 28.8 Plus
spn-A-PB 279 CG7948-PB 41..278 87..328 185 30.9 Plus
spn-A-PA 336 CG7948-PA 98..335 87..328 185 30.9 Plus