Clone FI03228 Report

Search the DGRC for FI03228

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:32
Well:28
Vector:pFlc-1
Associated Gene/TranscriptCG8852-RA
Protein status:FI03228.pep: gold
Sequenced Size:2412

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8852 2008-12-18 5.12 accounting

Clone Sequence Records

FI03228.complete Sequence

2412 bp assembled on 2008-09-15

GenBank Submission: BT044490.1

> FI03228.complete
AGTTTGATTTTCGCACACGAGGTGGTCGGACACGGATGAGCTTGATAGTT
TAGCGGTCTCTCGGTGACACGCTTCGATGGGCAGCTCGCATTTTTCGGTG
GCGATGACGCAGTGCGTCTTCCTCGTTGTCGTATCGCAGATTTTGTCACA
CGTGCGGGCAGCTGGCGATGCGATGTCTTCCGCCAACGAATCAATATCGT
TGCCACCGGCTTGCGTCATTCGGGCAACGCTCTATAAGACATCTTCGTCG
GAAAGGAGTCAAAACGATTTTGGGCTGCCTCTGGCAATAGATTGCAGTGA
GAACAGTAGCATGGGGATGAATTACTTCGATTTGGGCGCCCAAAGAGTGG
CCGGAAAGAGGCACGTTTCGCTGGATGGCTTTCAGACACCACCCTTGGGA
ATCTCGAGCTATGGCTTGGAGTACCTGGACAATTGTGTGGATCTGGAAAG
TGTCGAGATCCAACGTTTTGTGGGCGATGCCACCCTGAAACTGAGCTGTG
GAGGAGCTCTGATCCCCAACCTGACCGCAGTATCTTTCAGATACAACGAG
CTGGGTACATTGAGTGGAGAAACTATCCAGGACTTGCCACATCTTAAAAT
ACTACACTTGCAACAGAACTCACTGAGGTACCTAGAATACTTTAAGGAGC
ATTCTGACTTGGAAGAACTTCTGATACAGGACGAACGGGATTTGGTCTTG
AGGTTTAATGAAATCCTAAATCAGCTGCCAGAGCTGAGAAGGCTTAGTTT
GCGAAATGTAGAAAAGATTGAGGACCAATTCCTTAGAATCTTACCAGAAA
ACTTAACGGATCTGATAATCGAGAATACGCCCATTCAACCAGGAGTTTTG
TACTTGACCGAAGGCGTAGCGAAACTGGTTAACGTAACCATCACAAATTG
CCAGCTGAAGGGATTTGCATTGCAACCTGCACACAATTTGGATATTATGT
ATCTAAACCTAAGTGGCAATGCCATATCTTCGTTGAACATAAGTTTTGAA
AGTGGACCAAGCACCCTACTGACCTTGGATTTGAGCCGAAATAGATTGGA
GCACTTGAATTTCACCTGGTTCTATAGAACCACCAGTCTTCGTAGTCTTC
ACCTGCAGGAAAACCACTTCCATTCATTGTCCCTCTTCCAATTGGGCTTT
ATTTCCTCAGCGAGCATTCACCACATTGACCTGAGATCCAATGAATTGAT
GAGCTTCCGGGATACAGAAAATGCTGATCTACCGTCCTGGAACCCACAGC
TTCGAATTTCCATCGATGACAATCCTTGGAGCTGCCAGTGGATGCTGAAT
TTCTCGCACATGCAACCTCAACTCTTTAGACTATTCCAGTACTCCAAGTA
TATATCCCACATCAATATAAATGGCCTGAGTTGCACACCGCAAGAGCCGC
CCTCGGAAGAACCGCCCAAGGTGCGAAGAATCATGCACGTGAGGATCAAT
GGGACAGACTCTTCGATTCCCGTGCCACATCCACATGGAAATGTTTCCAG
TTTCACTGTCCTTTACGGCAACCCCGTAGAACTGCACCGAAGTCAGCGAT
CTTTAGCCTTGATAATCGTGTTTATGTTGCCCCTGGGCATCGCATTCCTC
TTCCTGTTGCTATATCTATACCTCCATTGCGAGCGGCTCTTCCACTTGTC
CTATTACGCCTCGGGATTGCCCTGTTTTGGTGGCGAAAAATCATCCAGTG
GGCCGAGGTTTGTGGATCATGTGGACATAGTGCGCTATCCCATTGCTAAT
GGCGGTTCCAGTTGCCCAGTGGATGTGGAAACCGAATTGCCAGATGGATA
CGAGACTCCTGTAAGTGGAGGTACCTCGATTTGCAATTGCACTGGTCACA
GAGAATCCACCTGCTCGAGGACCCATCATGTCACCTACGAGTCCTTACCA
GCTGAGCTGCCCTATCAACTGTACGCAGAGATCAAGGAGCAGGCGGATGA
GAATGGGGATGCGGATGAGGTGCTGGCCGTGACTACCGGCCCTACGGCTC
CCATCTACGATCATCTGTCGTTTGTGGAGGAGATGCCAAAACTGGATGAA
CTGAGAGATATATCCTAGTTGTCTTTGAATACGTAAATAGAGAACACGAA
TCTGGATGGATTATTCTTTTACAGTTTAAGGTCGCACAACAGCAAAGGTA
CTGCTGGTTACACCTAGGGTAGTTTAAGTAAGCTCAACTGTATTAATAAA
GAGTTGATTTGTTTTTATTGCTAAGTTTTTTTTTAGTTCGTAGTGTATTT
GTAAAGAATAAAGTCTCTGCACCCTGATTTGCTGTGCCCTGCGTTGTTAT
TATTTGTTAAGTTTTTATAAGTCTAAATTCGATTTAAAATTTCCATTGGA
ATTCATGCAATCATTTCATAATTGGTTTACGAGAGCTCACAACAATAAAA
AAAAAAAAAAAA

FI03228.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:06:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG8852-RA 2502 CG8852-RA 107..2502 1..2396 11980 100 Plus
Spindly-RB 2682 Spindly-RB 2480..2682 2397..2195 1015 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:02:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 3524711..3526778 1..2068 10085 99.2 Plus
chr2L 23010047 chr2L 3526837..3527166 2067..2396 1525 98.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:09:36 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:02:21
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3525133..3527200 1..2068 10340 100 Plus
2L 23513712 2L 3527259..3527589 2067..2397 1655 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:24:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3525133..3527200 1..2068 10340 100 Plus
2L 23513712 2L 3527259..3527589 2067..2397 1655 100 Plus
Blast to na_te.dros performed on 2019-03-16 16:02:22 has no hits.

FI03228.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:03:23 Download gff for FI03228.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 3524711..3526778 1..2068 99 -> Plus
chr2L 3526839..3527166 2069..2396 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:42:56 Download gff for FI03228.complete
Subject Subject Range Query Range Percent Splice Strand
CG8852-RA 1..1992 77..2068 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:09:05 Download gff for FI03228.complete
Subject Subject Range Query Range Percent Splice Strand
CG8852-RA 1..1992 77..2068 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:26:24 Download gff for FI03228.complete
Subject Subject Range Query Range Percent Splice Strand
CG8852-RA 1..1992 77..2068 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:54:29 Download gff for FI03228.complete
Subject Subject Range Query Range Percent Splice Strand
CG8852-RA 1..1992 77..2068 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:37:11 Download gff for FI03228.complete
Subject Subject Range Query Range Percent Splice Strand
CG8852-RA 1..2396 1..2396 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:09:05 Download gff for FI03228.complete
Subject Subject Range Query Range Percent Splice Strand
CG8852-RA 1..2396 1..2396 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:26:24 Download gff for FI03228.complete
Subject Subject Range Query Range Percent Splice Strand
CG8852-RA 3..2398 1..2396 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 12:13:03 Download gff for FI03228.complete
Subject Subject Range Query Range Percent Splice Strand
CG8852-RA 1..2396 1..2396 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:54:29 Download gff for FI03228.complete
Subject Subject Range Query Range Percent Splice Strand
CG8852-RA 3..2398 1..2396 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:03:23 Download gff for FI03228.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3527261..3527588 2069..2396 100   Plus
2L 3525133..3527200 1..2068 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:03:23 Download gff for FI03228.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3527261..3527588 2069..2396 100   Plus
2L 3525133..3527200 1..2068 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:03:23 Download gff for FI03228.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3527261..3527588 2069..2396 100   Plus
2L 3525133..3527200 1..2068 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:26:24 Download gff for FI03228.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3525133..3527200 1..2068 100 -> Plus
arm_2L 3527261..3527588 2069..2396 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:38:47 Download gff for FI03228.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3525133..3527200 1..2068 100 -> Plus
2L 3527261..3527588 2069..2396 100   Plus

FI03228.pep Sequence

Translation from 76 to 2067

> FI03228.pep
MGSSHFSVAMTQCVFLVVVSQILSHVRAAGDAMSSANESISLPPACVIRA
TLYKTSSSERSQNDFGLPLAIDCSENSSMGMNYFDLGAQRVAGKRHVSLD
GFQTPPLGISSYGLEYLDNCVDLESVEIQRFVGDATLKLSCGGALIPNLT
AVSFRYNELGTLSGETIQDLPHLKILHLQQNSLRYLEYFKEHSDLEELLI
QDERDLVLRFNEILNQLPELRRLSLRNVEKIEDQFLRILPENLTDLIIEN
TPIQPGVLYLTEGVAKLVNVTITNCQLKGFALQPAHNLDIMYLNLSGNAI
SSLNISFESGPSTLLTLDLSRNRLEHLNFTWFYRTTSLRSLHLQENHFHS
LSLFQLGFISSASIHHIDLRSNELMSFRDTENADLPSWNPQLRISIDDNP
WSCQWMLNFSHMQPQLFRLFQYSKYISHININGLSCTPQEPPSEEPPKVR
RIMHVRINGTDSSIPVPHPHGNVSSFTVLYGNPVELHRSQRSLALIIVFM
LPLGIAFLFLLLYLYLHCERLFHLSYYASGLPCFGGEKSSSGPRFVDHVD
IVRYPIANGGSSCPVDVETELPDGYETPVSGGTSICNCTGHRESTCSRTH
HVTYESLPAELPYQLYAEIKEQADENGDADEVLAVTTGPTAPIYDHLSFV
EEMPKLDELRDIS*

FI03228.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:42:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15242-PA 663 GF15242-PA 1..663 1..663 2233 66.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:42:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24952-PA 662 GG24952-PA 1..662 1..663 3006 89 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:42:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13693-PA 652 GH13693-PA 50..651 46..657 1456 51.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:20:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG8852-PA 663 CG8852-PA 1..663 1..663 3463 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:42:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23818-PA 674 GI23818-PA 55..671 45..654 1406 54 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:42:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18661-PA 654 GL18661-PA 16..654 24..663 1921 61.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:42:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21368-PA 654 GA21368-PA 1..654 10..663 1937 61.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:42:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18420-PA 654 GM18420-PA 1..654 10..663 3202 95.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:42:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23240-PA 610 GD23240-PA 1..610 1..663 2896 87.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:42:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21058-PA 661 GJ21058-PA 43..654 25..647 1606 53.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:42:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15450-PA 654 GK15450-PA 6..639 11..652 1549 50.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:42:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18243-PA 664 GE18243-PA 1..664 1..663 2918 85.8 Plus

FI03228.hyp Sequence

Translation from 76 to 2067

> FI03228.hyp
MGSSHFSVAMTQCVFLVVVSQILSHVRAAGDAMSSANESISLPPACVIRA
TLYKTSSSERSQNDFGLPLAIDCSENSSMGMNYFDLGAQRVAGKRHVSLD
GFQTPPLGISSYGLEYLDNCVDLESVEIQRFVGDATLKLSCGGALIPNLT
AVSFRYNELGTLSGETIQDLPHLKILHLQQNSLRYLEYFKEHSDLEELLI
QDERDLVLRFNEILNQLPELRRLSLRNVEKIEDQFLRILPENLTDLIIEN
TPIQPGVLYLTEGVAKLVNVTITNCQLKGFALQPAHNLDIMYLNLSGNAI
SSLNISFESGPSTLLTLDLSRNRLEHLNFTWFYRTTSLRSLHLQENHFHS
LSLFQLGFISSASIHHIDLRSNELMSFRDTENADLPSWNPQLRISIDDNP
WSCQWMLNFSHMQPQLFRLFQYSKYISHININGLSCTPQEPPSEEPPKVR
RIMHVRINGTDSSIPVPHPHGNVSSFTVLYGNPVELHRSQRSLALIIVFM
LPLGIAFLFLLLYLYLHCERLFHLSYYASGLPCFGGEKSSSGPRFVDHVD
IVRYPIANGGSSCPVDVETELPDGYETPVSGGTSICNCTGHRESTCSRTH
HVTYESLPAELPYQLYAEIKEQADENGDADEVLAVTTGPTAPIYDHLSFV
EEMPKLDELRDIS*

FI03228.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:26:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG8852-PA 663 CG8852-PA 1..663 1..663 3463 100 Plus