Clone FI03607 Report

Search the DGRC for FI03607

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:36
Well:7
Vector:pOT2
Associated Gene/TranscriptCG16947-RA
Protein status:FI03607.pep: gold
Sequenced Size:2266

Clone Sequence Records

FI03607.complete Sequence

2266 bp assembled on 2009-07-01

GenBank Submission: BT088896.1

> FI03607.complete
GAATCCGGGTGCGCGAGTGGAACGCGGATTTAGATTGTCGTAGCTCTTTA
ATTCAATTGACGATTTCGAGCTGCGATCTCCTTCGTTCGGCTGGTGTGTG
TTGTTTCACTTTCAACCGAGTGTGTCACCTGTGCGAGCCCATTAATACCC
AAGGATGAGCTGGACAAACGAAAGTTAGTTGCGATCGCGTGAAAAGGGAA
ACCGGACAGTCGGTTTTTTGAGTGCGGATACAAAGTCTACATGTGGCACA
ACGACAACAGCATCGGCCAGTAATTTAAATGCTTCGCGGCGGCAATTGAA
AGGGCCAGCAATTAACCACGACTACTGCAGCTGCGAGGCATAGTGGAAAA
TCACTTTTATAGACGTACATACATAACTCTATATATACATAGAGTTAGCT
CCTGCAGCAAAATGAAGAACCGCCAGCGAACGCGCCGAATATCGCTAAAT
GAAAACCACAACAGATACATGGGCAGCGGCGGCATCGATGTACAAATAGT
TACCAATACAAAGGAGCCCAATCAAGTCAATTTAAATTCATCGTCAGCCA
CGACGACCTCAGCGGAGGCTGCTCTGCCCGCTTCGCTTCCACTTGCTCAG
ATAGCGCAGCAGCCACATACCCATCCCCATCCCCATCCCAATCCCCATCT
CCACCAGCAACACCAGCTGATTGTGACGCCCACAACGATGACGGGCAAGT
ATCATCCAGCGCACGCCAAGCTGCGAAGATGCAAATCGACGCCGAGTCTC
AATTGCGATGGCATGGCGGAGCCCATGGAGGAGGACCAGCTCCATCGCTT
TGCAGCATGCTCACGTAACCCCGCCGCGGAGGCTCAGCAGCATGCACAGC
CATCGTGCAACAGCAGCAGCAGCAGCAGCGACGGCAGCTGCAACAGCAAC
AAGTGCAGCAGCAACATCTGCGGTGCGCAGCCAACAACTCCGGAGTCATT
GCGCTTCGGATGCGCTCACTACAAGCGGCGGGCCATGTTCGTGACCCCCT
GCTGCAACAAGTTCTACAAGTGCCGATTTTGCCACGACGAGAACGAGACG
CATCACTTCGATCGCAAAACGCTCACCGAACTAATATGCTCCGAGTGCAA
TACGCGGCAAACGGTGCGGGAGCAGTGCCTCAATTGCGGCGTGAGATTTG
GTAAGTACACCTGCCTGATCTGCAACCTCTTCGATGATGCGGACAAGCAG
CAGTACCATTGTCATGGATGTGGGATTTGTCGCATTGGCGGTGCGGAGAA
CTTCTTCCACTGCGAGGTGTGCAACATGTGCCTACCTATTCAGCTGAAGA
TCGATGGCCACCGGTGCGTGGAGAACATCTCGCGATCGCACTGCCCCGTG
TGCCTGGGCGACATCCACACTTCGCGCATACCCTGCCACATTCCCGACTG
CGGACACCTGCTGCACAAGATGTGCTTCGACCAGCTGCTGGCCTCCGGCC
ACTACACCTGTCCCACCTGCCAGACCTCGCTGATCGATATGACGGCGCTG
TGGGTATACTTGGACGACCAGGCGGAGCGCATGCCGGTGCCACTGAAGTA
CGAGAATCAGCGAGTGCACATATTCTGCAACGATTGTCACAAGACTTCAA
AAACCAAATTCCATTTCATCGGACTAAAGTGCGTCCATTGCGGCGCCTAC
AATACAACGCAGGATGTTAAACGCCGCCTGTCCCTGGTCACCGATGAACC
ATCCTCGGCGTGATATCCACCCGATTCAAACCACAGCATCAGCATCCGCA
TCTATATTCGCATCAGCAACAGGAAACCTCTTGCCATGCTACCCACACAT
CTGAGGACACTGATTTGTTAGCTCAAGACAACACAACTGAAATCGAAACG
CATTGAATTTAGATCAAATTCGAGCTGGTATCGAATATTAACCATACAAA
CAAACATAAACAAAAGGCTCCCTAAATGATTTAAATATTGGTCTGGTCCC
CTTAAGATTTAAAAATATCAATTAGTTTTTATGGAAATAGTTAGTTTCAA
TCGTAATAGGCATTTAAAAAACATTTTACCCTAATTGAGTTTTTAAATCT
CCAGAGGATTTCAACGCACCAATATTTTGTACACAACACACATTGTTAAA
TTTAAATTTTCACTCGAATTTCAAGTATTCTATTTTGCAAAAATTATTTT
GTGTAAATCTCGAATTTCTCTGTACACATTGCAAGCTCCGTTGCCACGAA
TAAAAAAAGTAAACGTACAAAAAGGGAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA

FI03607.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:33:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG16947.a 2278 CG16947.a 50..2276 1..2227 11135 100 Plus
CG16947.b 2081 CG16947.b 30..2081 111..2162 10245 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:38:02
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 6462235..6463117 993..111 4385 99.8 Minus
chr2L 23010047 chr2L 6457987..6458624 2226..1592 3035 98.7 Minus
chr2L 23010047 chr2L 6458689..6458968 1593..1314 1400 100 Minus
chr2L 23010047 chr2L 6459528..6459690 1155..993 800 99.4 Minus
chr2L 23010047 chr2L 6459296..6459456 1314..1154 775 98.8 Minus
chr2L 23010047 chr2L 6464502..6464616 115..1 530 97.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:10:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:38:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6463262..6464144 993..111 4400 99.9 Minus
2L 23513712 2L 6459014..6459649 2227..1592 3180 100 Minus
2L 23513712 2L 6459716..6459995 1593..1314 1400 100 Minus
2L 23513712 2L 6460555..6460717 1155..993 815 100 Minus
2L 23513712 2L 6460323..6460483 1314..1154 805 100 Minus
2L 23513712 2L 6465529..6465643 115..1 575 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:49:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6463262..6464144 993..111 4400 99.8 Minus
2L 23513712 2L 6459014..6459649 2227..1592 3180 100 Minus
2L 23513712 2L 6459716..6459995 1593..1314 1400 100 Minus
2L 23513712 2L 6460555..6460717 1155..993 815 100 Minus
2L 23513712 2L 6460323..6460483 1314..1154 805 100 Minus
2L 23513712 2L 6465529..6465643 115..1 575 100 Minus
Blast to na_te.dros performed 2019-03-16 18:38:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2341..2387 1729..1775 136 76.6 Plus

FI03607.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:38:53 Download gff for FI03607.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 6457987..6458622 1594..2226 98 <- Minus
chr2L 6458689..6458967 1315..1593 100 <- Minus
chr2L 6459296..6459454 1156..1314 98 <- Minus
chr2L 6459528..6459689 994..1155 99 <- Minus
chr2L 6462235..6462289 939..993 100 == Minus
chr2L 6462394..6463112 116..834 95 <- Minus
chr2L 6464502..6464616 1..115 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:11:22 Download gff for FI03607.complete
Subject Subject Range Query Range Percent Splice Strand
CG16947-RA 1..1302 412..1713 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:49:30 Download gff for FI03607.complete
Subject Subject Range Query Range Percent Splice Strand
CG16947-RA 1..1302 412..1713 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:50:04 Download gff for FI03607.complete
Subject Subject Range Query Range Percent Splice Strand
CG16947-RA 1..1302 412..1713 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:44:29 Download gff for FI03607.complete
Subject Subject Range Query Range Percent Splice Strand
CG16947-RA 1..1302 412..1713 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-01 13:35:11 Download gff for FI03607.complete
Subject Subject Range Query Range Percent Splice Strand
CG16947-RA 1..1751 412..2162 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:49:30 Download gff for FI03607.complete
Subject Subject Range Query Range Percent Splice Strand
CG16947-RA 1..1751 412..2162 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:04 Download gff for FI03607.complete
Subject Subject Range Query Range Percent Splice Strand
CG16947-RA 27..2252 1..2226 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:44:29 Download gff for FI03607.complete
Subject Subject Range Query Range Percent Splice Strand
CG16947-RA 27..2252 1..2226 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:38:53 Download gff for FI03607.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6459015..6459647 1594..2226 100 <- Minus
2L 6459716..6459994 1315..1593 100 <- Minus
2L 6460323..6460481 1156..1314 100 <- Minus
2L 6460555..6460716 994..1155 100 <- Minus
2L 6463262..6464139 116..993 100 <- Minus
2L 6465529..6465643 1..115 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:38:53 Download gff for FI03607.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6459015..6459647 1594..2226 100 <- Minus
2L 6459716..6459994 1315..1593 100 <- Minus
2L 6460323..6460481 1156..1314 100 <- Minus
2L 6460555..6460716 994..1155 100 <- Minus
2L 6463262..6464139 116..993 100 <- Minus
2L 6465529..6465643 1..115 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:38:53 Download gff for FI03607.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6459015..6459647 1594..2226 100 <- Minus
2L 6459716..6459994 1315..1593 100 <- Minus
2L 6460323..6460481 1156..1314 100 <- Minus
2L 6460555..6460716 994..1155 100 <- Minus
2L 6463262..6464139 116..993 100 <- Minus
2L 6465529..6465643 1..115 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:04 Download gff for FI03607.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6459015..6459647 1594..2226 100 <- Minus
arm_2L 6459716..6459994 1315..1593 100 <- Minus
arm_2L 6460323..6460481 1156..1314 100 <- Minus
arm_2L 6460555..6460716 994..1155 100 <- Minus
arm_2L 6463262..6464139 116..993 100 <- Minus
arm_2L 6465529..6465643 1..115 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:25:15 Download gff for FI03607.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6459716..6459994 1315..1593 100 <- Minus
2L 6460323..6460481 1156..1314 100 <- Minus
2L 6460555..6460716 994..1155 100 <- Minus
2L 6459015..6459647 1594..2226 100 <- Minus
2L 6463262..6464139 116..993 100 <- Minus
2L 6465529..6465643 1..115 100   Minus

FI03607.hyp Sequence

Translation from 411 to 1712

> FI03607.hyp
MKNRQRTRRISLNENHNRYMGSGGIDVQIVTNTKEPNQVNLNSSSATTTS
AEAALPASLPLAQIAQQPHTHPHPHPNPHLHQQHQLIVTPTTMTGKYHPA
HAKLRRCKSTPSLNCDGMAEPMEEDQLHRFAACSRNPAAEAQQHAQPSCN
SSSSSSDGSCNSNKCSSNICGAQPTTPESLRFGCAHYKRRAMFVTPCCNK
FYKCRFCHDENETHHFDRKTLTELICSECNTRQTVREQCLNCGVRFGKYT
CLICNLFDDADKQQYHCHGCGICRIGGAENFFHCEVCNMCLPIQLKIDGH
RCVENISRSHCPVCLGDIHTSRIPCHIPDCGHLLHKMCFDQLLASGHYTC
PTCQTSLIDMTALWVYLDDQAERMPVPLKYENQRVHIFCNDCHKTSKTKF
HFIGLKCVHCGAYNTTQDVKRRLSLVTDEPSSA*

FI03607.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:32:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG16947-PB 433 CG16947-PB 1..433 1..433 2431 100 Plus
CG16947-PA 433 CG16947-PA 1..433 1..433 2431 100 Plus

FI03607.pep Sequence

Translation from 411 to 1712

> FI03607.pep
MKNRQRTRRISLNENHNRYMGSGGIDVQIVTNTKEPNQVNLNSSSATTTS
AEAALPASLPLAQIAQQPHTHPHPHPNPHLHQQHQLIVTPTTMTGKYHPA
HAKLRRCKSTPSLNCDGMAEPMEEDQLHRFAACSRNPAAEAQQHAQPSCN
SSSSSSDGSCNSNKCSSNICGAQPTTPESLRFGCAHYKRRAMFVTPCCNK
FYKCRFCHDENETHHFDRKTLTELICSECNTRQTVREQCLNCGVRFGKYT
CLICNLFDDADKQQYHCHGCGICRIGGAENFFHCEVCNMCLPIQLKIDGH
RCVENISRSHCPVCLGDIHTSRIPCHIPDCGHLLHKMCFDQLLASGHYTC
PTCQTSLIDMTALWVYLDDQAERMPVPLKYENQRVHIFCNDCHKTSKTKF
HFIGLKCVHCGAYNTTQDVKRRLSLVTDEPSSA*

FI03607.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:11:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23699-PA 410 GF23699-PA 1..410 1..433 1644 77.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:11:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23622-PA 446 GG23622-PA 1..446 1..433 1986 86.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:11:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11278-PA 304 GH11278-PA 67..304 196..433 1234 95 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:25:44
Subject Length Description Subject Range Query Range Score Percent Strand
Rchy1-PB 433 CG16947-PB 1..433 1..433 2431 100 Plus
Rchy1-PA 433 CG16947-PA 1..433 1..433 2431 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:11:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24399-PA 374 GI24399-PA 42..374 104..433 1363 77.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:11:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26108-PA 310 GL26108-PA 72..310 195..433 1274 97.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:11:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14230-PA 449 GA14230-PA 1..449 1..433 1605 71.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:11:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17939-PA 436 GM17939-PA 1..436 1..433 1934 94.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:11:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22576-PA 433 GD22576-PA 1..433 1..433 1965 92.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:11:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16185-PA 392 GJ16185-PA 121..392 161..433 1389 93.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:11:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18696-PA 470 GK18696-PA 1..470 1..433 1439 64.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:11:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18442-PA 450 GE18442-PA 1..450 1..433 1991 89.4 Plus