Clone FI03678 Report

Search the DGRC for FI03678

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:36
Well:78
Vector:pOT2
Associated Gene/TranscriptRint1-RA
Protein status:FI03678.pep: gold
Sequenced Size:2405

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8605 2008-12-18 5.12 accounting

Clone Sequence Records

FI03678.complete Sequence

2405 bp assembled on 2008-10-27

GenBank Submission: BT050457.1

> FI03678.complete
CGACATGGTCACACTGGCTAAATTATTTATTTTTTATACGTGGTTCGTGG
CCCGTTTAGCTTTTAATTTAAATGTTGTTTTAGCTATTGCTGCACCGAAA
TGCATGCAGAACTCAGCGAAATGGAGTTGCGCATAGTGGCGCGACTAAAC
GAGGAGATCGGAAAGGATGCCAGCCAGCTACACCGGGCCAGCCACCTCGT
TAGCCACTACAAAAAGCACCTCCAAGTTTTGTCCCAAACGCTCGACTACG
AGGATCCCCAGAACGTGTCCTGCTACAAAACCGCCTTCCAATGCCAGCAA
CAGGTTTGCGAGAGCATCGACTTCGAGCTGGAAAAGCTGGCTCACTTCGA
GGACAAGCTGAAAAGAAAGCTAAAGGAGTGCCAGCCCGTGCTTGAGGGAG
TGGCAGAGGATTTAGACAAGGTGCGACAACTGCAGCGTTTGCAACAGTAT
CTGCTCCTGGTGCAGGACATTCAGGAGATAAGCGCTGCCCTAGGCAATGC
CATCAATGGCAAGGACGAGGACAAACTGGTTAATATCTACCTAACCCTCT
ACGAGGGCAACGACTGCGAGCACAGCGTAGTGGGTCGCCTGCATGCTGTG
CAGGCACAGTCGCTGAAATCCTTTGCCGAACGCACTGCCATCTACTGGCA
CAAGCTGCTCCTCAAGCGCCTGTCCAGCGCATTCGAGGCTGTACTGAAGA
GCATGCGCTGGGCGCATCTAGAACAGCAGGCCCTTAACTATTCGTCCGCA
CGAGACACTGCCAAGGCGCAACTGCTAGCGGAGTACATGTTCCTCATCAA
ATCTCCAGCCGAAGAGCGGGCGCCACTGCAAAGCATCACGCCCAGCATCG
TGTGCCAGCCCATCAACCGGGTGGTGCAGCTCCTATTGGCGCCGTATCGC
CAGCGTTTCCAATTTCACTTCACAGGCACCAGACAAACCAATAGATTAGA
CAAGCCCGAGTGGTTCTATACGCAAATTCTCAACTGGGGCAAGGAGACGC
ATTTCTTTGTAGGCAAAACATTTCAGCCAGCTGCCATTAAAGCGGGTAAG
CTGGACTACAATCTCAGGCTGGAGTTTATTCGAGGACTGGTGCAGTTAGC
CATTGAAAAGTTGGCGGTGGACATAGAACAGATTGCCCAGGACCAGATAC
TATTTGCCCATCTACTTGATGAGACGCTGGCCTTCGAATCCGAGTTACGG
GAAACATTTGGGTATCCGGCTAGTTTTCCCAGCGCGATTTCTGTAATCAC
ACAACCCATGTATTTGCTACGCTGGATTTCACTGGAAGAACGATTTTGTG
CGGAAAAAATGGATGACATTCTGCAGGCGGAGACGCCATTCCAGCTAATC
GATCCCAACTCATTCGAGAACGATCTGAAAATACCCAAGTGTGCGGATCA
GTTTATGCGACTGCTGGACGCCATTAAGGATCGTTACTATGGTCTGATTC
AACCGGGCCACCAGCTGCAGTTCCTGCACCTGCAACTGGAGCTGATCGAT
AGCTTCCGACAACGCCTGGTGCAACTGCACAGCAGTGGAGCGGTGCCAAG
CATTCCCATACTGAATGCCATCAACTATTTGGTAATGGTGCTCCGTGAAT
GGGGCGAAAACGTGCATTATCTGCACCTGCATGCGGCACTTGCCGGTCCA
AATGCCACGGAGATTAATTCAGTGTTCGAGCATGCCGTCGCTGAGTTGGA
ACACTGGGCCAGACAACTAATGCGGAATCTGGCCACCAAGGCAACCAATG
AAATGAAGGCGAAATCGATGAGCTATCGCCGTGACGCGTGGCCGACTATG
CCCGAACAAAACAGCCGGGAGCCGTTCATCCTTTCGCCCAGTGGTGGCGA
AATGTTCCAGGTGCTGGTCACCCTGCTACACAATCTGGAACGGGAACTCT
CCGCCAATCTGTTCACCCAAACGCTCCGTTTGATAGCCCATCAAATCGAT
GACTTCATGCTCGAGAGCATGGTCATGAACACGAAGTTCTCAGCTGCGGG
AGCAGCGCAATTCAATTATGACATGACACGCAATTTATTCGCGCTCTTTG
GACAGTATACACGTCGTCCCGAGCTGCTCTTCAAGCGAACACACGATGCC
TGCAAGCTGCTGGCGGCGGCACGAGGAACAGCTTTGTTGCTGCTGGAAAC
GCTGCGTGGTAATCAATCGGTGGAGGAGAAGACGAAGCCGCTGAGGGAAC
TGCATGTGCTCAGCATGGACAGCAAACAGTGCATTGAGGTTCTGGAGCGG
AGGATGGACATAAAGATGTTTTAGGTGATGGAAATTAATTTAAGCTAGTT
AATTGGGCCCTAGGAACTTTTGAAATGATATACAACGTTCGGACGCCGTT
TTTTTGCGAAATAAAATCATTAACACCCAAAATGAAAAAAAAAAAAAAAA
AAAAA

FI03678.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:11:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG8605-RA 2453 CG8605-RA 2..2388 1..2387 11935 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:40:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 7316085..7316913 240..1068 4145 100 Plus
chr3L 24539361 chr3L 7317252..7318044 1295..2087 3965 100 Plus
chrU 10048995 chrU 1397442..1397928 842..354 2200 97.1 Minus
chr3L 24539361 chr3L 7318120..7318417 2087..2384 1490 100 Plus
chr3L 24539361 chr3L 7315791..7316030 1..240 1200 100 Plus
chr3L 24539361 chr3L 7316971..7317197 1068..1294 1135 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 16:11:10
Subject Length Description Subject Range Query Range Score Percent Strand
CR41379-RA 351 CR41379-RA 1..335 506..842 1495 96.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:40:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7323923..7324751 240..1068 4145 100 Plus
3L 28110227 3L 7325090..7325882 1295..2087 3965 100 Plus
2R 25286936 2R 1806868..1807354 842..354 2185 96.9 Minus
3L 28110227 3L 7325958..7326258 2087..2387 1505 100 Plus
3L 28110227 3L 7323629..7323868 1..240 1200 100 Plus
3L 28110227 3L 7324809..7325035 1068..1294 1135 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:29:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 7317023..7317851 240..1068 4145 100 Plus
3L 28103327 3L 7318190..7318982 1295..2087 3965 100 Plus
2R 25260384 2R 1806868..1807354 842..354 2195 96.9 Minus
3L 28103327 3L 7319058..7319358 2087..2387 1505 100 Plus
3L 28103327 3L 7316729..7316968 1..240 1200 100 Plus
3L 28103327 3L 7317909..7318135 1068..1294 1135 100 Plus
Blast to na_te.dros performed on 2019-03-16 02:40:19 has no hits.

FI03678.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:41:36 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 7315791..7316030 1..240 100 -> Plus
chr3L 7316086..7316913 241..1068 100 -> Plus
chr3L 7316972..7317197 1069..1294 100 -> Plus
chr3L 7317252..7318044 1295..2087 100 -> Plus
chr3L 7318121..7318417 2088..2384 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:45:40 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
CG8605-RA 1..2175 100..2274 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:17:19 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
CG8605-RA 1..2175 100..2274 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:00:49 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
CG8605-RA 1..2175 100..2274 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:16:02 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
Rint1-RA 1..2175 100..2274 100   Plus
Sim4 to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 16:11:11 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
CR41379-RA 1..335 506..842 96   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:57:11 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
CG8605-RA 1..2384 1..2384 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:17:19 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
CG8605-RA 1..2384 1..2384 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:00:49 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
CG8605-RA 11..2394 1..2384 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-27 13:48:29 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
CG8605-RA 1..2384 1..2384 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:16:02 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
Rint1-RA 11..2394 1..2384 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:41:36 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7323629..7323868 1..240 100 -> Plus
3L 7323924..7324751 241..1068 100 -> Plus
3L 7324810..7325035 1069..1294 100 -> Plus
3L 7325090..7325882 1295..2087 100 -> Plus
3L 7325959..7326255 2088..2384 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:41:36 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7323629..7323868 1..240 100 -> Plus
3L 7323924..7324751 241..1068 100 -> Plus
3L 7324810..7325035 1069..1294 100 -> Plus
3L 7325090..7325882 1295..2087 100 -> Plus
3L 7325959..7326255 2088..2384 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:41:36 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7323629..7323868 1..240 100 -> Plus
3L 7323924..7324751 241..1068 100 -> Plus
3L 7324810..7325035 1069..1294 100 -> Plus
3L 7325090..7325882 1295..2087 100 -> Plus
3L 7325959..7326255 2088..2384 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:00:49 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7316729..7316968 1..240 100 -> Plus
arm_3L 7317024..7317851 241..1068 100 -> Plus
arm_3L 7317910..7318135 1069..1294 100 -> Plus
arm_3L 7318190..7318982 1295..2087 100 -> Plus
arm_3L 7319059..7319355 2088..2384 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:48:23 Download gff for FI03678.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7316729..7316968 1..240 100 -> Plus
3L 7317024..7317851 241..1068 100 -> Plus
3L 7317910..7318135 1069..1294 100 -> Plus
3L 7318190..7318982 1295..2087 100 -> Plus
3L 7319059..7319355 2088..2384 100   Plus

FI03678.pep Sequence

Translation from 99 to 2273

> FI03678.pep
MHAELSEMELRIVARLNEEIGKDASQLHRASHLVSHYKKHLQVLSQTLDY
EDPQNVSCYKTAFQCQQQVCESIDFELEKLAHFEDKLKRKLKECQPVLEG
VAEDLDKVRQLQRLQQYLLLVQDIQEISAALGNAINGKDEDKLVNIYLTL
YEGNDCEHSVVGRLHAVQAQSLKSFAERTAIYWHKLLLKRLSSAFEAVLK
SMRWAHLEQQALNYSSARDTAKAQLLAEYMFLIKSPAEERAPLQSITPSI
VCQPINRVVQLLLAPYRQRFQFHFTGTRQTNRLDKPEWFYTQILNWGKET
HFFVGKTFQPAAIKAGKLDYNLRLEFIRGLVQLAIEKLAVDIEQIAQDQI
LFAHLLDETLAFESELRETFGYPASFPSAISVITQPMYLLRWISLEERFC
AEKMDDILQAETPFQLIDPNSFENDLKIPKCADQFMRLLDAIKDRYYGLI
QPGHQLQFLHLQLELIDSFRQRLVQLHSSGAVPSIPILNAINYLVMVLRE
WGENVHYLHLHAALAGPNATEINSVFEHAVAELEHWARQLMRNLATKATN
EMKAKSMSYRRDAWPTMPEQNSREPFILSPSGGEMFQVLVTLLHNLEREL
SANLFTQTLRLIAHQIDDFMLESMVMNTKFSAAGAAQFNYDMTRNLFALF
GQYTRRPELLFKRTHDACKLLAAARGTALLLLETLRGNQSVEEKTKPLRE
LHVLSMDSKQCIEVLERRMDIKMF*

FI03678.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:06:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10574-PA 724 GF10574-PA 1..724 1..724 3452 89.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:06:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14415-PA 724 GG14415-PA 1..724 1..724 3624 93.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:06:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15969-PA 725 GH15969-PA 1..724 1..724 3197 81.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:08:43
Subject Length Description Subject Range Query Range Score Percent Strand
Rint1-PA 724 CG8605-PA 1..724 1..724 3714 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:06:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16619-PA 723 GI16619-PA 1..723 1..724 3250 84.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:06:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21308-PA 238 GL21308-PA 1..232 1..231 847 72.8 Plus
Dper\GL21311-PA 234 GL21311-PA 1..147 242..388 735 89.1 Plus
Dper\GL21322-PA 110 GL21322-PA 1..101 624..724 471 88.1 Plus
Dper\GL21311-PA 234 GL21311-PA 146..234 522..610 373 76.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:06:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21201-PA 733 GA21201-PA 1..724 1..724 3260 84.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:06:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14831-PA 724 GM14831-PA 1..724 1..724 3825 98.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:06:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14004-PA 722 GD14004-PA 1..722 1..724 3794 98.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12875-PA 723 GJ12875-PA 1..723 1..724 3259 85.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17521-PA 724 GK17521-PA 1..724 1..724 3237 82 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21605-PA 724 GE21605-PA 1..724 1..724 3640 94.3 Plus

FI03678.hyp Sequence

Translation from 99 to 2273

> FI03678.hyp
MHAELSEMELRIVARLNEEIGKDASQLHRASHLVSHYKKHLQVLSQTLDY
EDPQNVSCYKTAFQCQQQVCESIDFELEKLAHFEDKLKRKLKECQPVLEG
VAEDLDKVRQLQRLQQYLLLVQDIQEISAALGNAINGKDEDKLVNIYLTL
YEGNDCEHSVVGRLHAVQAQSLKSFAERTAIYWHKLLLKRLSSAFEAVLK
SMRWAHLEQQALNYSSARDTAKAQLLAEYMFLIKSPAEERAPLQSITPSI
VCQPINRVVQLLLAPYRQRFQFHFTGTRQTNRLDKPEWFYTQILNWGKET
HFFVGKTFQPAAIKAGKLDYNLRLEFIRGLVQLAIEKLAVDIEQIAQDQI
LFAHLLDETLAFESELRETFGYPASFPSAISVITQPMYLLRWISLEERFC
AEKMDDILQAETPFQLIDPNSFENDLKIPKCADQFMRLLDAIKDRYYGLI
QPGHQLQFLHLQLELIDSFRQRLVQLHSSGAVPSIPILNAINYLVMVLRE
WGENVHYLHLHAALAGPNATEINSVFEHAVAELEHWARQLMRNLATKATN
EMKAKSMSYRRDAWPTMPEQNSREPFILSPSGGEMFQVLVTLLHNLEREL
SANLFTQTLRLIAHQIDDFMLESMVMNTKFSAAGAAQFNYDMTRNLFALF
GQYTRRPELLFKRTHDACKLLAAARGTALLLLETLRGNQSVEEKTKPLRE
LHVLSMDSKQCIEVLERRMDIKMF*

FI03678.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:34:43
Subject Length Description Subject Range Query Range Score Percent Strand
Rint1-PA 724 CG8605-PA 1..724 1..724 3714 100 Plus