BDGP Sequence Production Resources |
Search the DGRC for FI03683
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 36 |
Well: | 83 |
Vector: | pOT2 |
Associated Gene/Transcript | sm-RB |
Protein status: | FI03683.pep: gold |
Sequenced Size: | 1768 |
1768 bp assembled on 2009-09-04
GenBank Submission: BT099712.1
> FI03683.complete CCTAGGAATACTCAATCCACAAATATATAAAATAAAAAAATCACAAAAAA AACTGAACATAAAATTTGTGTTGTGTGTTACATTAAACAGTGTTAACTTT TACCGTGTTACCGACAATTGCTTCATTGCGTACATTGGCTTCGTGTTAAC TAGTTGATTTTCGGCTGCCCAGAATTAACCCTTAAAGAATCTTTCTAACA ATTTTCACTGCCGATCGAGTGGTTCTGATTTGTGGCCTTAAGACCCAATT AAATCAAGTTGCTGCAGCATGAATAACCTGAACGCGAATGCCAGTGCCTT TTTGTGGCAGGTACCGCCGCCGCAGCAGTTGACCCCTCAATCGGTGCAGC AGCAGACGGTGCAGTCGGTGCAGTCCATGCAGTCCGTGCAGCATAGCCAG CTGCTTCAATCCGCTGTAGTCTCGCAGCCGCGCAAGTTTGGTGGCAACAA GAGCAACTATAACTACATGCAGAATCATGCCATTATGGGTCCGGGCGGCG GTCCAATGGGTGGGATCGGTGGCAACCCTAACATCTACCGAAAGCGCCAT TCTATCAACACCTACAATGCTGGCTTATATCAAACCAATGAACCACCGCT ATTGGGACCCGGAGCCGCTTTCCCACCATTCGGAGCTCCCGAATATCACA CCACCACACCGGAGAACTGGAAGGGGGCCGCCATCCATCCCACTGGCCTG ATGAAGGAGCCCGCTGGTGTTGTGCCCGGACGCAATGCTCCGGTGGCCTT CACACCGCAAGGACAGGCTCAGGGCGCCGTCATGATGGTCTACGGCCTGG ACCACGACACTTCCAACACGGATAAGCTCTTCAATTTGGTTTGCCTGTAC GGCAACGTGGCACGGATCAAGTTCTTGAAGACCAAAGAGGGCACCGCCAT GGTGCAAATGGGAGACGCTGTGGCCGTTGAGCGTTGCGTGCAGCACTTGA ACAACATTCCCGTGGGCACTGGTGGCAAGATACAGATCGCTTTCTCCAAA CAGAACTTCCTATCCGAGGTGATCAACCCGTTCTTGCTGCCCGATCATTC GCCCAGCTTCAAGGAGTACACCGGCTCCAAGAACAATCGTTTCCTATCGC CGGCCCAGGCGAGCAAGAATCGCATTCAACCACCGAGCAAGATTTTGCAC TTTTTCAACACACCGCCCGGCTTGACCGAGGACCAACTGATTGGAATCTT TAACATCAAGGATGTGCCCGCCACATCGGTGCGCCTGTTCCCCTTGAAGA CCGAGCGCTCGTCGTCGGGACTGATCGAATTTTCCAATATCTCGCAGGCA GTGCTGGCTATCATGAAGTGCAACCATCTGCCTATTGAGGGTAAAGGCAC CAAGTTCCCATTCATCATGAAGCTGTGCTTTTCCTCATCCAAGAGCATGA ACGGCGCCTGGAACAATGCGGCCAGCGAGGGCATGATCGAGAAGGAGAAC GAGGTGGATACCAAGGTGGACATCTACAATTGAGATTTGATTACGATTGT GTAAGCAAGCAAACAACAACCGGCTTAACTAGAACACAATACAGAACAAC ACTGGGGATATGGGTCGCAAACAACGTGCAGAAGACAACAGCAACAGCAA AATCAGCAACAAATGCGTCACCAACTGCACCAAATGCTGAAACTTCAACT ACAGATCCACTACGATCCACCAACTTGATGGCTTACACATTCGACAAGAA AAGCGGGAATTTCAAACAAATTGATTGCTAAATCAATTAAACAAACCAAC AAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 15433668..15434257 | 590..1 | 2935 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 15417473..15417878 | 1750..1345 | 1985 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 15419611..15419887 | 1141..865 | 1385 | 100 | Minus |
chr2R | 21145070 | chr2R | 15419345..15419552 | 1347..1140 | 1040 | 100 | Minus |
chr2R | 21145070 | chr2R | 15425214..15425397 | 773..590 | 920 | 100 | Minus |
chr2R | 21145070 | chr2R | 15424961..15425057 | 865..769 | 485 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 19546449..19547038 | 590..1 | 2950 | 100 | Minus |
2R | 25286936 | 2R | 19530291..19530702 | 1756..1345 | 2060 | 100 | Minus |
2R | 25286936 | 2R | 19532436..19532712 | 1141..865 | 1385 | 100 | Minus |
2R | 25286936 | 2R | 19532169..19532376 | 1347..1140 | 1040 | 100 | Minus |
2R | 25286936 | 2R | 19538029..19538212 | 773..590 | 920 | 100 | Minus |
2R | 25286936 | 2R | 19537776..19537872 | 865..769 | 485 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 19547648..19548237 | 590..1 | 2950 | 100 | Minus |
2R | 25260384 | 2R | 19531490..19531901 | 1756..1345 | 2060 | 100 | Minus |
2R | 25260384 | 2R | 19533635..19533911 | 1141..865 | 1385 | 100 | Minus |
2R | 25260384 | 2R | 19533368..19533575 | 1347..1140 | 1040 | 100 | Minus |
2R | 25260384 | 2R | 19539228..19539411 | 773..590 | 920 | 100 | Minus |
2R | 25260384 | 2R | 19538975..19539071 | 865..769 | 485 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2527..2719 | 1512..1702 | 222 | 60.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2446 | 1514..1653 | 149 | 60.8 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3285..3374 | 1572..1666 | 147 | 66.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2367..2454 | 1579..1667 | 145 | 64 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6762..6850 | 1570..1654 | 138 | 65.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2292..2453 | 1554..1721 | 133 | 57.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6805 | 1586..1654 | 129 | 65.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6741..6825 | 1570..1653 | 125 | 62.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6872..6923 | 1579..1631 | 118 | 71.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 15417473..15417876 | 1347..1750 | 99 | <- | Minus |
chr2R | 15419346..15419550 | 1142..1346 | 100 | <- | Minus |
chr2R | 15419611..15419886 | 866..1141 | 100 | <- | Minus |
chr2R | 15424961..15425053 | 773..865 | 100 | <- | Minus |
chr2R | 15425215..15425396 | 591..772 | 100 | <- | Minus |
chr2R | 15433668..15434257 | 1..590 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sm-RB | 1..1215 | 269..1483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sm-RB | 1..1215 | 269..1483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sm-RB | 1..1215 | 269..1483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sm-RB | 1..1215 | 269..1483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sm-RB | 1..1745 | 6..1750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sm-RB | 17..1766 | 1..1750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sm-RB | 34..1783 | 1..1750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sm-RB | 34..1783 | 1..1750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19538030..19538211 | 591..772 | 100 | <- | Minus |
2R | 19530297..19530700 | 1347..1750 | 100 | <- | Minus |
2R | 19532170..19532374 | 1142..1346 | 100 | <- | Minus |
2R | 19532436..19532711 | 866..1141 | 100 | <- | Minus |
2R | 19537776..19537868 | 773..865 | 100 | <- | Minus |
2R | 19546449..19547038 | 1..590 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19538030..19538211 | 591..772 | 100 | <- | Minus |
2R | 19530297..19530700 | 1347..1750 | 100 | <- | Minus |
2R | 19532170..19532374 | 1142..1346 | 100 | <- | Minus |
2R | 19532436..19532711 | 866..1141 | 100 | <- | Minus |
2R | 19537776..19537868 | 773..865 | 100 | <- | Minus |
2R | 19546449..19547038 | 1..590 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19538030..19538211 | 591..772 | 100 | <- | Minus |
2R | 19530297..19530700 | 1347..1750 | 100 | <- | Minus |
2R | 19532170..19532374 | 1142..1346 | 100 | <- | Minus |
2R | 19532436..19532711 | 866..1141 | 100 | <- | Minus |
2R | 19537776..19537868 | 773..865 | 100 | <- | Minus |
2R | 19546449..19547038 | 1..590 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 15417802..15418205 | 1347..1750 | 100 | <- | Minus |
arm_2R | 15419675..15419879 | 1142..1346 | 100 | <- | Minus |
arm_2R | 15419941..15420216 | 866..1141 | 100 | <- | Minus |
arm_2R | 15425281..15425373 | 773..865 | 100 | <- | Minus |
arm_2R | 15425535..15425716 | 591..772 | 100 | <- | Minus |
arm_2R | 15433954..15434543 | 1..590 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19531496..19531899 | 1347..1750 | 100 | <- | Minus |
2R | 19533369..19533573 | 1142..1346 | 100 | <- | Minus |
2R | 19533635..19533910 | 866..1141 | 100 | <- | Minus |
2R | 19538975..19539067 | 773..865 | 100 | <- | Minus |
2R | 19539229..19539410 | 591..772 | 100 | <- | Minus |
2R | 19547648..19548237 | 1..590 | 100 | Minus |
Translation from 268 to 1482
> FI03683.hyp MNNLNANASAFLWQVPPPQQLTPQSVQQQTVQSVQSMQSVQHSQLLQSAV VSQPRKFGGNKSNYNYMQNHAIMGPGGGPMGGIGGNPNIYRKRHSINTYN AGLYQTNEPPLLGPGAAFPPFGAPEYHTTTPENWKGAAIHPTGLMKEPAG VVPGRNAPVAFTPQGQAQGAVMMVYGLDHDTSNTDKLFNLVCLYGNVARI KFLKTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSE VINPFLLPDHSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPP GLTEDQLIGIFNIKDVPATSVRLFPLKTERSSSGLIEFSNISQAVLAIMK CNHLPIEGKGTKFPFIMKLCFSSSKSMNGAWNNAASEGMIEKENEVDTKV DIYN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sm-PB | 404 | CG9218-PB | 1..404 | 1..404 | 2134 | 100 | Plus |
sm-PI | 420 | CG9218-PI | 1..420 | 1..404 | 2104 | 96 | Plus |
sm-PJ | 464 | CG9218-PJ | 1..464 | 1..404 | 1691 | 75.4 | Plus |
sm-PK | 535 | CG9218-PK | 234..535 | 103..404 | 1579 | 99.3 | Plus |
sm-PAC | 301 | CG9218-PAC | 4..301 | 107..404 | 1563 | 99.3 | Plus |
Translation from 268 to 1482
> FI03683.pep MNNLNANASAFLWQVPPPQQLTPQSVQQQTVQSVQSMQSVQHSQLLQSAV VSQPRKFGGNKSNYNYMQNHAIMGPGGGPMGGIGGNPNIYRKRHSINTYN AGLYQTNEPPLLGPGAAFPPFGAPEYHTTTPENWKGAAIHPTGLMKEPAG VVPGRNAPVAFTPQGQAQGAVMMVYGLDHDTSNTDKLFNLVCLYGNVARI KFLKTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSE VINPFLLPDHSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPP GLTEDQLIGIFNIKDVPATSVRLFPLKTERSSSGLIEFSNISQAVLAIMK CNHLPIEGKGTKFPFIMKLCFSSSKSMNGAWNNAASEGMIEKENEVDTKV DIYN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13176-PA | 421 | GF13176-PA | 1..421 | 1..404 | 1732 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20899-PA | 423 | GG20899-PA | 11..423 | 11..404 | 1834 | 88.9 | Plus |
Dere\GG11844-PA | 800 | GG11844-PA | 607..795 | 171..365 | 180 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22768-PA | 482 | GH22768-PA | 169..482 | 88..404 | 1504 | 89.3 | Plus |
Dgri\GH17472-PA | 920 | GH17472-PA | 727..915 | 171..365 | 190 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sm-PB | 404 | CG9218-PB | 1..404 | 1..404 | 2134 | 100 | Plus |
sm-PI | 420 | CG9218-PI | 1..420 | 1..404 | 2104 | 96 | Plus |
sm-PJ | 464 | CG9218-PJ | 1..464 | 1..404 | 1691 | 75.4 | Plus |
sm-PV | 540 | CG9218-PV | 239..540 | 103..404 | 1579 | 99.3 | Plus |
sm-PT | 552 | CG9218-PT | 251..552 | 103..404 | 1579 | 99.3 | Plus |
sm-PK | 535 | CG9218-PK | 234..535 | 103..404 | 1579 | 99.3 | Plus |
sm-PE | 475 | CG9218-PE | 177..475 | 106..404 | 1566 | 99.3 | Plus |
sm-PA | 475 | CG9218-PA | 177..475 | 106..404 | 1566 | 99.3 | Plus |
sm-PM | 497 | CG9218-PM | 201..497 | 108..404 | 1565 | 100 | Plus |
sm-PL | 492 | CG9218-PL | 196..492 | 108..404 | 1565 | 100 | Plus |
sm-PAC | 301 | CG9218-PAC | 4..301 | 107..404 | 1563 | 99.3 | Plus |
sm-PAA | 508 | CG9218-PAA | 211..508 | 107..404 | 1563 | 99.3 | Plus |
sm-PZ | 491 | CG9218-PZ | 194..491 | 107..404 | 1563 | 99.3 | Plus |
sm-PU | 515 | CG9218-PU | 218..515 | 107..404 | 1563 | 99.3 | Plus |
sm-PAB | 509 | CG9218-PAB | 213..509 | 108..404 | 1562 | 99.7 | Plus |
sm-PP | 434 | CG9218-PP | 138..434 | 108..404 | 1561 | 99.7 | Plus |
sm-PH | 480 | CG9218-PH | 184..480 | 108..404 | 1561 | 99.7 | Plus |
sm-PO | 494 | CG9218-PO | 199..494 | 107..404 | 1539 | 98.7 | Plus |
sm-PY | 260 | CG9218-PY | 1..260 | 145..404 | 1351 | 100 | Plus |
sm-PW | 260 | CG9218-PW | 1..260 | 145..404 | 1351 | 100 | Plus |
sm-PG | 260 | CG9218-PG | 1..260 | 145..404 | 1351 | 100 | Plus |
heph-PQ | 493 | CG31000-PQ | 292..488 | 163..365 | 178 | 25.6 | Plus |
heph-PM | 568 | CG31000-PM | 367..563 | 163..365 | 178 | 25.6 | Plus |
heph-PU | 581 | CG31000-PU | 380..576 | 163..365 | 178 | 25.6 | Plus |
heph-PT | 581 | CG31000-PT | 380..576 | 163..365 | 178 | 25.6 | Plus |
heph-PS | 581 | CG31000-PS | 380..576 | 163..365 | 178 | 25.6 | Plus |
heph-PC | 581 | CG31000-PC | 380..576 | 163..365 | 178 | 25.6 | Plus |
heph-PZ | 604 | CG31000-PZ | 403..599 | 163..365 | 178 | 25.6 | Plus |
heph-PV | 608 | CG31000-PV | 407..603 | 163..365 | 178 | 25.6 | Plus |
heph-PP | 608 | CG31000-PP | 407..603 | 163..365 | 178 | 25.6 | Plus |
heph-PN | 608 | CG31000-PN | 407..603 | 163..365 | 178 | 25.6 | Plus |
heph-PB | 608 | CG31000-PB | 407..603 | 163..365 | 178 | 25.6 | Plus |
heph-PK | 608 | CG31000-PK | 407..603 | 163..365 | 178 | 25.6 | Plus |
heph-PJ | 608 | CG31000-PJ | 407..603 | 163..365 | 178 | 25.6 | Plus |
heph-PI | 608 | CG31000-PI | 407..603 | 163..365 | 178 | 25.6 | Plus |
heph-PE | 608 | CG31000-PE | 407..603 | 163..365 | 178 | 25.6 | Plus |
heph-PD | 608 | CG31000-PD | 407..603 | 163..365 | 178 | 25.6 | Plus |
heph-PA | 608 | CG31000-PA | 407..603 | 163..365 | 178 | 25.6 | Plus |
heph-PF | 608 | CG31000-PF | 407..603 | 163..365 | 178 | 25.6 | Plus |
heph-PG | 615 | CG31000-PG | 414..610 | 163..365 | 178 | 25.6 | Plus |
heph-PL | 622 | CG31000-PL | 421..617 | 163..365 | 178 | 25.6 | Plus |
heph-PR | 789 | CG31000-PR | 588..784 | 163..365 | 178 | 25.6 | Plus |
heph-PO | 789 | CG31000-PO | 588..784 | 163..365 | 178 | 25.6 | Plus |
heph-PH | 789 | CG31000-PH | 588..784 | 163..365 | 178 | 25.6 | Plus |
heph-PW | 799 | CG31000-PW | 598..794 | 163..365 | 178 | 25.6 | Plus |
heph-PY | 898 | CG31000-PY | 697..893 | 163..365 | 178 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18546-PA | 481 | GI18546-PA | 168..481 | 88..404 | 1508 | 89.3 | Plus |
Dmoj\GI22798-PA | 834 | GI22798-PA | 641..829 | 171..365 | 190 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11734-PA | 325 | GL11734-PA | 108..290 | 185..372 | 845 | 87.2 | Plus |
Dper\GL24102-PA | 494 | GL24102-PA | 309..489 | 177..365 | 179 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30475-PB | 412 | GA30475-PB | 1..412 | 1..404 | 1698 | 82.9 | Plus |
Dpse\GA30475-PE | 514 | GA30475-PE | 1..514 | 1..404 | 1674 | 67.5 | Plus |
Dpse\GA30475-PD | 428 | GA30475-PD | 1..428 | 1..404 | 1668 | 79.6 | Plus |
Dpse\GA30475-PC | 352 | GA30475-PC | 51..352 | 103..404 | 1551 | 95.7 | Plus |
Dpse\GA30475-PA | 498 | GA30475-PA | 199..498 | 105..404 | 1545 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\sm-PA | 420 | GM19822-PA | 1..420 | 1..404 | 1830 | 92.4 | Plus |
Dsec\GM16408-PA | 792 | GM16408-PA | 599..787 | 171..365 | 180 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\sm-PA | 388 | GD25314-PA | 194..388 | 107..301 | 1014 | 96.4 | Plus |
Dsim\GD16206-PA | 792 | GD16206-PA | 599..787 | 171..365 | 179 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21415-PA | 480 | GJ21415-PA | 168..480 | 88..404 | 1462 | 87.7 | Plus |
Dvir\GJ22800-PA | 818 | GJ22800-PA | 625..813 | 171..365 | 190 | 27 | Plus |