Clone FI03861 Report

Search the DGRC for FI03861

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:38
Well:61
Vector:pOT2
Associated Gene/TranscriptCG30392-RA
Protein status:FI03861.pep: gold
Sequenced Size:1126

Clone Sequence Records

FI03861.complete Sequence

1126 bp assembled on 2009-05-13

GenBank Submission: BT083430.1

> FI03861.complete
ACAAAGGGGAAAGGCAGGCTTATAAGATGAGTAAAACGAGCTTAGCGACG
CAGACCAATGGCACGGCGGAAAATGGAAACTGTTTTGATATCCTCAAAGT
GTCTAATTTGTTCGAAACCAGCCTTCTGGACGAGGATGACGTACAATTAG
ACGCATACTTGGCAGCCTACGAGGAAATAATGAAGTTCTTCCAGCTCATG
GGCAGTGTCTTCAGTTTTGTCAGCAGCGATGTGCGCAGTAAAATAGATAT
CTTATACGCCCTGAGAGCCAAGGACGCGGAGGAGCAGGAACACTTTAATA
CCTTCAGAACCATGCTGGATTACGAGAAGGAGGCCCAGTTGCTTACTCAG
AAGGGTTACGTGTCTGGCAGTCGAACGCTGCTACGTCTTCATCGCGGTCT
TGACTTTGTCTACGAGTTTCTCAATCGGATCCAGGCGATACCCGACGACC
AAAAGACTGTGGACGTGTGCAAGGAGGCCTACGATGACACCCTGGGCAAG
CATCACTCATTCCTCATCCGCAAAGGAGCGCGCCTGGCTATGTACGCGAT
GCCCACTAGGGGAGATCTTCTCAAGAAAGTGTGCTCCGATGTCGAGGCGG
CCAAAGAGAACCTGCCTTCCATGCTGAAGCATATGAGAACCAACTACGAT
CGCACAGAAGACCTCTACACGCTATACGATCTACACAGCCTGCCTTAGAA
TCCATACATACATAATCCATATCTATACATCTGGGGCATTCAAAAGATCT
GATAGAGTGATAAATACCAAAGTTTCCCTACTTTACCCTAGCCAGAAAAG
ATGCCTATAATATGATATTATACCATACTTTTATAATATGCTTTTGTACT
GTATCTAACTCTCTATCAGATCTGGTGTCTACCCCGGCGTAGATTATGTA
GCTAAAATTTTCTGTATTGATTGTGTAACTGCAAGTATTCGTTTCCTAAG
ACGTAAGTTTTAATTTTGCATTTTGAATTGCCTGCAATCGCTCATCTATC
GCCTTGTCCACAGGCTGTGCAATATTTCCAAAATCCCCCGTATTTTAACG
CCATTAAAGCTTTAGTCATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAA

FI03861.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:26:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG30392-RA 1178 CG30392-RA 69..1140 1..1072 5360 100 Plus
CG30392.a 1125 CG30392.a 77..1029 1..953 4765 100 Plus
CG30392.a 1125 CG30392.a 1029..1087 1014..1072 295 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:42:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 17177410..17178064 1070..398 2925 96 Minus
chr2R 21145070 chr2R 17178120..17178337 402..185 1075 99.5 Minus
chr2R 21145070 chr2R 17178403..17178588 186..1 900 98.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:11:44 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:42:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21290912..21291586 1072..398 3360 99.9 Minus
2R 25286936 2R 21291642..21291859 402..185 1090 100 Minus
2R 25286936 2R 21291925..21292110 186..1 930 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:20:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 21292111..21292785 1072..398 3360 99.8 Minus
2R 25260384 2R 21292841..21293058 402..185 1090 100 Minus
2R 25260384 2R 21293124..21293309 186..1 930 100 Minus
Blast to na_te.dros performed on 2019-03-16 00:42:51 has no hits.

FI03861.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:44:02 Download gff for FI03861.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 17177410..17178059 403..1070 96 <- Minus
chr2R 17178120..17178337 185..402 99 <- Minus
chr2R 17178405..17178588 1..184 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:53:34 Download gff for FI03861.complete
Subject Subject Range Query Range Percent Splice Strand
CG30392-RA 1..672 27..698 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:52:00 Download gff for FI03861.complete
Subject Subject Range Query Range Percent Splice Strand
CG30392-RA 1..672 27..698 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:52:02 Download gff for FI03861.complete
Subject Subject Range Query Range Percent Splice Strand
CG30392-RA 1..672 27..698 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:11:35 Download gff for FI03861.complete
Subject Subject Range Query Range Percent Splice Strand
CG30392-RA 1..672 27..698 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 16:48:02 Download gff for FI03861.complete
Subject Subject Range Query Range Percent Splice Strand
CG30392-RA 69..1138 1..1070 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:52:00 Download gff for FI03861.complete
Subject Subject Range Query Range Percent Splice Strand
CG30392-RA 69..1138 1..1070 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:52:02 Download gff for FI03861.complete
Subject Subject Range Query Range Percent Splice Strand
CG30392-RA 72..1141 1..1070 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:11:35 Download gff for FI03861.complete
Subject Subject Range Query Range Percent Splice Strand
CG30392-RA 72..1141 1..1070 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:44:02 Download gff for FI03861.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21291927..21292110 1..184 100   Minus
2R 21290914..21291581 403..1070 100 <- Minus
2R 21291642..21291859 185..402 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:44:02 Download gff for FI03861.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21291927..21292110 1..184 100   Minus
2R 21290914..21291581 403..1070 100 <- Minus
2R 21291642..21291859 185..402 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:44:02 Download gff for FI03861.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21291927..21292110 1..184 100   Minus
2R 21290914..21291581 403..1070 100 <- Minus
2R 21291642..21291859 185..402 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:52:02 Download gff for FI03861.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17178419..17179086 403..1070 100 <- Minus
arm_2R 17179147..17179364 185..402 100 <- Minus
arm_2R 17179432..17179615 1..184 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:42:47 Download gff for FI03861.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21292113..21292780 403..1070 100 <- Minus
2R 21292841..21293058 185..402 100 <- Minus
2R 21293126..21293309 1..184 100   Minus

FI03861.hyp Sequence

Translation from 2 to 697

> FI03861.hyp
KGERQAYKMSKTSLATQTNGTAENGNCFDILKVSNLFETSLLDEDDVQLD
AYLAAYEEIMKFFQLMGSVFSFVSSDVRSKIDILYALRAKDAEEQEHFNT
FRTMLDYEKEAQLLTQKGYVSGSRTLLRLHRGLDFVYEFLNRIQAIPDDQ
KTVDVCKEAYDDTLGKHHSFLIRKGARLAMYAMPTRGDLLKKVCSDVEAA
KENLPSMLKHMRTNYDRTEDLYTLYDLHSLP*

FI03861.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:37:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG30392-PB 223 CG30392-PB 1..223 9..231 1145 100 Plus
CG30392-PA 223 CG30392-PA 1..223 9..231 1145 100 Plus

FI03861.pep Sequence

Translation from 2 to 697

> FI03861.pep
KGERQAYKMSKTSLATQTNGTAENGNCFDILKVSNLFETSLLDEDDVQLD
AYLAAYEEIMKFFQLMGSVFSFVSSDVRSKIDILYALRAKDAEEQEHFNT
FRTMLDYEKEAQLLTQKGYVSGSRTLLRLHRGLDFVYEFLNRIQAIPDDQ
KTVDVCKEAYDDTLGKHHSFLIRKGARLAMYAMPTRGDLLKKVCSDVEAA
KENLPSMLKHMRTNYDRTEDLYTLYDLHSLP*

FI03861.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:26:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12108-PA 223 GF12108-PA 1..223 9..231 963 78.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:26:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20787-PA 223 GG20787-PA 1..223 9..231 1107 92.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:26:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21311-PA 219 GH21311-PA 1..219 14..231 769 67.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:13:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG30392-PB 223 CG30392-PB 1..223 9..231 1145 100 Plus
CG30392-PA 223 CG30392-PA 1..223 9..231 1145 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:26:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19744-PA 219 GI19744-PA 2..219 16..231 732 63.3 Plus
Dmoj\GI21465-PA 198 GI21465-PA 19..192 44..227 143 25.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:26:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10756-PA 233 GL10756-PA 11..233 9..231 829 68.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:26:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15813-PA 233 GA15813-PA 11..233 9..231 831 68.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:26:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15733-PA 223 GM15733-PA 1..223 9..231 1169 98.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:26:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25210-PA 222 GD25210-PA 1..222 9..231 1152 98.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:26:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18048-PA 218 GJ18048-PA 12..218 26..231 719 65.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:26:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21657-PA 222 GK21657-PA 17..222 26..231 746 72.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:26:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13724-PA 223 GE13724-PA 1..223 9..231 1116 92.8 Plus