BDGP Sequence Production Resources |
Search the DGRC for FI03911
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 39 |
Well: | 11 |
Vector: | pOT2 |
Associated Gene/Transcript | upd3-RB |
Protein status: | FI03911.pep: gold |
Sequenced Size: | 2242 |
Gene | Date | Evidence |
---|---|---|
upd3 | 2008-08-15 | Release 5.9 accounting |
upd3 | 2008-12-18 | 5.12 accounting |
2242 bp assembled on 2008-07-31
GenBank Submission: BT044177.1
> FI03911.complete CAGCGCTGTTGACTTCGACTTCGATCGAATCGGAATCAAATCATAGCAGA CAGTCGAAGGCAGCGCGTCGACACTTAACGCGATAGTTCGTCCAGCCGCG ATATAAAGATACAAAGATACGCAGCCAAATTCAACAAATTCAACAAATTC GACAAAGTCGCCTGATTCGCCTGATTCGCCAAATTCGCCAAATCGCGATC GCTTTTATTATTGGTTAGTTTTTTTTTTCGTTTTTTTCCCCGTTGCATTC TGGAAGCTTCTTTCCGGCAAATACACACAAAGAAAAGACTAACAGCGTTA CAAAAGCAAAGTGCGTGTCAATCAAGTACGAATTTTTGTGCGGAATTCCC AGCCAACGATTTTTATGTAAATGACGACAGCTGACCGCCCGCTCGACGTC AGCAGGAGCAGCGGAAGCGGTAGCCGGAGCGGTAACAAAACGGCCAGAAC CAGGAATCCAGTGGAACCGCAGCCGCAACCGCCGTTCGTGGATCGACGAC GACGCCTGAACAGGAACTGGTCACTGATCTTACTCGCCTTGGCCATGTCC CAGTTTGCCCTCTCCGGCGGCGGTTGTGGCGTCTCAGCGGCGCCCAGTCA CCTGGCCACCCCGCCCACTGACAGCCCCTCCAGTCCCATCAATCCCACCA ATCCCCTGAAGCACCTACAGAAGCGTTCCAGAGCGGCCAACTTCCGGCTG ACCTTCCAGCAGAAATTGAATGCCAGCAGTACGCATCTGGACTGGGAGAA CACCTGCAATCTGAAGCCCACGGGTCTGAACGAAACGCATAGCAAGGCGA AACGCTGCAAGAAACGCCAAAGGATCCTGCAGAATCTACAGAACCAAACG GGCCGCGAGCTGCGGGGCATCCAGGCCGAGGACAAGGCCAGGATCACCAC CAATGCGGACAAGCTGGCCACAGTGAGCACCAAGACTCTGGACATTGTCG AGAAGAACAAGTGGCGATTCTATAAGGGAAACTACAGATTCCTGCCCCGT CTGAATCTCACTAGCAAACAGTTGAACCTTCGCCACGCCCATCGCGACCT GCAGATTTACGTGGGCGCCTTCACGTACATGCGCAACATCAAGTTGCATT GGGACCTGGCCAACTTGCAGGCGAAGAGCGTGCTCTCCGACGAGCTGGGA AGGATGCGGAAGTCCGCCCGCGAGGTGCTCTGCAGCGTGGAGGAGGCCAT CAACCTGACCAACCTGCTGTACACACCCAACAGGCAGCGGGCGCCACAGC CGAGGGGCCAGAAGAAGCGGCGCCAGGCCCAACCGGTGGTCACCTACAAG ATACTGCCGCGCAAGCTGATGGAGAAGCGTCTGCAGCAGTTCAACTCGAC GTTGGTGCCACTCGTGGAGCTGCACCAGCAGGCGACCTTGGCCGCACGCG GGGAGGATGTACCACCACCGCCCGACGACCTGATGGTCCTGGAGCAGCAC GCCCTCTTCACCAAACTGAAGTTTGTGCAGTATCTCAAGAGTATCCGCAA GATACTCGCGAACCAGCGTAAGAGTCTGTGCAAGGCGACCACCCACGTGC CAAAGGCGATCCAGAAGAAACTCTAGACGAGAGCAGAGAGCAGAGAGTAG AAAGTAGAAAGTAGCTATAGCCAAGAGCTCAGAACCGGCGAAACCTCCAT TCCACACAACGAGGCTCATTCCATGAAGACATCCTTAATTTATTAAACAT CCAATATTTATTACTCACGCCACGCCACACCAGTCACGACGAATCACGAG GAATCCCCGACAATCACAAGGCTATGAAAAACCGAATAAGTAATGTGAAC AATCCACCACAGACGTGAATTTGAGATACCCAGTTTTCTCGATATTCTAA CACGATAGTAATGTTTTCTCCGACTAAATTTATTATTATTATTATTTTTT TTTTTTTTGATAGCTTTAAGTCCCATTGTATTATTTATTATTGCAACTCG CCAACAATCTGCCGCACATTCCGCTAGATACTAAGTATACTAGATATACT TTGCCTTGTATTACGATGCTGTGATAGTAGATGATTAAAGTAAACACAAC GCTCCGCGACGGCCACAAGCTATATATCTCCCCCGACTATATTTACACAC TGATATATGTATGTACGATTTACACCTCTATGTAACTTAGCTTTGATTAG GAATTAACATTTTAGACATCAAATACAAACACAAATATACAAATATACAA ATACAAACCATTGAAAGTACAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
upd3-RB | 2421 | upd3-RB | 198..2421 | 1..2223 | 11005 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 18172520..18173721 | 1019..2220 | 5980 | 99.8 | Plus |
chrX | 22417052 | chrX | 18168558..18169008 | 373..823 | 2255 | 100 | Plus |
chrX | 22417052 | chrX | 18166358..18166730 | 1..373 | 1865 | 100 | Plus |
chrX | 22417052 | chrX | 18169110..18169312 | 823..1025 | 1000 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 18283394..18284599 | 1019..2223 | 5920 | 99.6 | Plus |
X | 23542271 | X | 18279433..18279883 | 373..823 | 2240 | 99.8 | Plus |
X | 23542271 | X | 18277233..18277605 | 1..373 | 1865 | 100 | Plus |
X | 23542271 | X | 18279985..18280187 | 823..1025 | 1000 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 18291492..18292697 | 1019..2223 | 5930 | 99.5 | Plus |
X | 23527363 | X | 18287531..18287981 | 373..823 | 2240 | 99.7 | Plus |
X | 23527363 | X | 18285331..18285703 | 1..373 | 1865 | 100 | Plus |
X | 23527363 | X | 18288083..18288285 | 823..1025 | 1000 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 147..208 | 1942..1877 | 158 | 75.8 | Minus |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 883..951 | 1948..1879 | 149 | 71.8 | Minus |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 939..1021 | 1942..1862 | 140 | 65.1 | Minus |
R1-2 | 3216 | R1-2 R1-2 3216bp | 533..596 | 871..935 | 124 | 71.6 | Plus |
BS | 5142 | BS BS 5142bp | 5095..5142 | 1939..1892 | 114 | 70.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 18166358..18166730 | 1..373 | 100 | -> | Plus |
chrX | 18168559..18169008 | 374..823 | 100 | -> | Plus |
chrX | 18169111..18169308 | 824..1021 | 100 | -> | Plus |
chrX | 18172523..18173721 | 1022..2220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
upd3-RB | 1..1206 | 371..1576 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
upd3-RB | 1..1206 | 371..1576 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
upd3-RB | 1..1206 | 371..1576 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
upd3-RB | 1..1206 | 371..1576 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
upd3-RB | 1..1206 | 371..1576 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
upd3-RB | 1..2221 | 1..2220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
upd3-RB | 1..2221 | 1..2220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
upd3-RB | 1..2221 | 1..2220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
upd3-RB | 1..2221 | 1..2220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
upd3-RB | 1..2221 | 1..2220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18277233..18277605 | 1..373 | 100 | -> | Plus |
X | 18279434..18279883 | 374..823 | 99 | -> | Plus |
X | 18279986..18280183 | 824..1021 | 100 | -> | Plus |
X | 18283397..18284596 | 1022..2220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18277233..18277605 | 1..373 | 100 | -> | Plus |
X | 18279434..18279883 | 374..823 | 99 | -> | Plus |
X | 18279986..18280183 | 824..1021 | 100 | -> | Plus |
X | 18283397..18284596 | 1022..2220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18277233..18277605 | 1..373 | 100 | -> | Plus |
X | 18279434..18279883 | 374..823 | 99 | -> | Plus |
X | 18279986..18280183 | 824..1021 | 100 | -> | Plus |
X | 18283397..18284596 | 1022..2220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 18171266..18171638 | 1..373 | 100 | -> | Plus |
arm_X | 18173467..18173916 | 374..823 | 99 | -> | Plus |
arm_X | 18174019..18174216 | 824..1021 | 100 | -> | Plus |
arm_X | 18177430..18178629 | 1022..2220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18285331..18285703 | 1..373 | 100 | -> | Plus |
X | 18287532..18287981 | 374..823 | 99 | -> | Plus |
X | 18288084..18288281 | 824..1021 | 100 | -> | Plus |
X | 18291495..18292694 | 1022..2220 | 99 | Plus |
Translation from 370 to 1575
> FI03911.pep MTTADRPLDVSRSSGSGSRSGNKTARTRNPVEPQPQPPFVDRRRRLNRNW SLILLALAMSQFALSGGGCGVSAAPSHLATPPTDSPSSPINPTNPLKHLQ KRSRAANFRLTFQQKLNASSTHLDWENTCNLKPTGLNETHSKAKRCKKRQ RILQNLQNQTGRELRGIQAEDKARITTNADKLATVSTKTLDIVEKNKWRF YKGNYRFLPRLNLTSKQLNLRHAHRDLQIYVGAFTYMRNIKLHWDLANLQ AKSVLSDELGRMRKSAREVLCSVEEAINLTNLLYTPNRQRAPQPRGQKKR RQAQPVVTYKILPRKLMEKRLQQFNSTLVPLVELHQQATLAARGEDVPPP PDDLMVLEQHALFTKLKFVQYLKSIRKILANQRKSLCKATTHVPKAIQKK L*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22431-PA | 404 | GF22431-PA | 111..389 | 92..384 | 628 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19156-PA | 480 | GG19156-PA | 77..480 | 2..387 | 1493 | 79.3 | Plus |
Dere\GG18131-PA | 428 | GG18131-PA | 24..246 | 57..307 | 183 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17723-PA | 417 | GH17723-PA | 102..396 | 82..387 | 488 | 40.5 | Plus |
Dgri\GH17790-PA | 458 | GH17790-PA | 61..226 | 98..280 | 223 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
upd3-PB | 401 | CG33542-PB | 1..401 | 1..401 | 2070 | 100 | Plus |
upd1-PC | 413 | CG5993-PC | 24..246 | 57..306 | 187 | 27.6 | Plus |
upd1-PB | 413 | CG5993-PB | 24..246 | 57..306 | 187 | 27.6 | Plus |
upd1-PA | 413 | CG5993-PA | 24..246 | 57..306 | 187 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15470-PA | 790 | GI15470-PA | 500..770 | 101..390 | 456 | 38.9 | Plus |
Dmoj\GI15131-PA | 380 | GI15131-PA | 117..288 | 92..280 | 195 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26967-PA | 317 | GL26967-PA | 4..307 | 59..388 | 744 | 50.2 | Plus |
Dper\GL27044-PA | 539 | GL27044-PA | 187..349 | 100..281 | 190 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22327-PA | 382 | GA22327-PA | 1..357 | 1..388 | 775 | 48.2 | Plus |
Dpse\GA19283-PA | 539 | GA19283-PA | 187..349 | 100..281 | 191 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22889-PA | 452 | GM22889-PA | 40..452 | 2..401 | 1836 | 89.7 | Plus |
Dsec\GM22824-PA | 401 | GM22824-PA | 49..232 | 80..280 | 174 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15648-PA | 413 | GD15648-PA | 64..232 | 86..280 | 173 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19180-PA | 338 | GJ19180-PA | 39..320 | 99..390 | 572 | 44.5 | Plus |
Dvir\GJ18988-PA | 458 | GJ18988-PA | 73..236 | 100..280 | 210 | 28.2 | Plus |
Translation from 370 to 1575
> FI03911.hyp MTTADRPLDVSRSSGSGSRSGNKTARTRNPVEPQPQPPFVDRRRRLNRNW SLILLALAMSQFALSGGGCGVSAAPSHLATPPTDSPSSPINPTNPLKHLQ KRSRAANFRLTFQQKLNASSTHLDWENTCNLKPTGLNETHSKAKRCKKRQ RILQNLQNQTGRELRGIQAEDKARITTNADKLATVSTKTLDIVEKNKWRF YKGNYRFLPRLNLTSKQLNLRHAHRDLQIYVGAFTYMRNIKLHWDLANLQ AKSVLSDELGRMRKSAREVLCSVEEAINLTNLLYTPNRQRAPQPRGQKKR RQAQPVVTYKILPRKLMEKRLQQFNSTLVPLVELHQQATLAARGEDVPPP PDDLMVLEQHALFTKLKFVQYLKSIRKILANQRKSLCKATTHVPKAIQKK L*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
upd3-PB | 401 | CG33542-PB | 1..401 | 1..401 | 2070 | 100 | Plus |
os-PC | 413 | CG5993-PC | 24..246 | 57..306 | 187 | 27.6 | Plus |
os-PB | 413 | CG5993-PB | 24..246 | 57..306 | 187 | 27.6 | Plus |
os-PA | 413 | CG5993-PA | 24..246 | 57..306 | 187 | 27.6 | Plus |