Clone FI04012 Report

Search the DGRC for FI04012

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:40
Well:12
Vector:pBS SK-
Associated Gene/TranscriptCG4004-RA
Protein status:FI04012.pep: gold
Sequenced Size:3377

Clone Sequence Records

FI04012.complete Sequence

3377 bp assembled on 2008-10-27

GenBank Submission: BT099768.1

> FI04012.complete
AATCGAGCGTGAAAACGTGCAATAAAACCAAAGTTAACAAAAACAAAAAA
AAAAAAACCAGACTACTTAATGTCCCAGATGGGCGGCACATGCTTGTACG
ATGAGCCCGAAATCATGGAGGAGTTCATCAGCTGTTATCAGTATTTCACC
GCCCTGTGGGACAGCAGCAGTCCCGATTATCTATCGAAACAGAAAAAGGA
GCCCGGCTATCAGGAGCTATTGAAGATACTGCGACGCGTTAATAGCAACT
GTTCGATTCAGGATGTTAAGCGAAAGATAAACTCGCTGCGTTGCTGCTAT
CGTCGTGAATTCAAAAAGGTACAGGAATCGGTCAATGGCTACCAGACGCG
TCTCTGGTGGTTTCATCTGATGGATTTCCTCAAGCCGGTACTCAACATAC
AATCGCCGGCCAGGGTGAAATCCGAGAACGTGGACGATAGTCTCGACGAG
ACCAGCATTCAGGATGTTGACATTATGTCTGATGCCTTTCCACACGAAGA
GGATATGCTACGTCTTGATGCCGTGGGTGATGGCGATGTTGAACCGGAAC
CCGAGCCTGATAACGATCCCGAATTGGATAACATGGATGATCATGTTGAT
GATTATCGTAACAATTCATCGGCTGGGAGCATTAAGAACAATGGCTATCA
GCAGCACACCGTATCTTCGCACCAGCAGCATAACGGTGAATCGCAGACTT
CGGATAAATCCGGACGTCGCATCCGTAACCGACGAAGACGCAGTAGCAAT
GACACCGATTACGTTGAAGCGGCGAGAAAGCGTAGAAATGTGGAGACTTC
GAATAGAGATAGAGACTGGCATAGAGAGCGGGATAGGGAGCGAGACAGAA
AGCATGAAAGCGACAGCGAGTACGAGTGCGAGCTGATCGGAAAACGGATG
GCCAGCCACTTCCGGCGTATGCGTCCGGATCAGCGACTTTTCGCCGAACG
GATCATCAGCGAGGTGTTGGTCTATGGCCGAATGAATCGCCTTTCGTTCG
AGACCCAATTTAGTATGGGTCATAAATAAGTGAAACTAAACTAAAACTCA
TTTCGCATATGAAAATTCAATTGAAAACGTATGAACGACAATTTAATTAT
TTCAAATTATATCTTTAACGATCATTTCATTTGGCATTACGGTTTAAAAA
AAAAGCATAATATTGAACGACAAAATGCACTATGTCCGTTATAGCAATAA
TTAATATTGCATAAGAAACAAAAATGTAATTAAGTTAAGCTGAAAACTCG
ACAATATTTTTAAGTTTTCGTAGTTTAAGTGGAAAAATAGATAGAACCGA
AATGAATGATATTTTTAGCCGCCTGCAACGCTAAGCAAAAAAAAAACCAA
AAAAAAAAATGCAGAAATGGCAAATGTAAAGCGAAAACGGCTAAAAGCGA
AAATGCGATGCAAAAGGGAAGGAGAAGAAAAGGGCAAAAACAAAAAGGAT
GAAAGCAAATAAAGGAACTGGTTGTTATTCATTTAAAATTTGACTGAGTG
GTTCTGCATGCGGATCCCTTCCCCTCTTCATCCCCGCCCCCTTTCCTCGA
CAAGCAGCCAGCACATCTTGTTTTGTCAGCCTGCCTTCTTCTTTCTTCTA
CTTCTTCATCTCCTCCGCCTTCTTCCCGTTTTGCTAATTTTCTGCTGCTG
TGCTGCGATTCTTTTATTTCAGGTTTCTTTGCCTTGCCGCTGTGTTCTCT
TTTCCTTCTTTACTCCTTTTCTTTTCTACACACTCCCAATCTTTTCCTTT
GCCGTTTCCTTTGCTTTAGTAACTTTAATTTGTTGGCATTGCCATTGCCG
TTATACTGGCGTTCGTCTCTTTCTCGAAATCTATCGCGCCCTCTCGCACT
GTCTTGCCCTTTCACTCATTGCTCTATTATCGTTACACAGCCAAATAAAA
TGGGTACTTTTTAAAGTAAACAATAATCTCAATATGTTATATAACAATAA
AGCTCATTTGGAAAAAGAATAGTTCTCACATTATACACAATGTATTATTG
TTTTCTATCAATTAAAATTAATTAAAATAATTAAATTAATACTACTTAAA
ATACATACATATAGAGAGAAATATCGTTCTGTGTAATTTTCGGTTAGGTC
GGTTCTATTTTCTTTTGATTTTCTTTATGATTCTCTTTATGATTCTCTGT
TTTCGCCAGTAAGATGGTAAATGACAGAAGGGCGGAAAACTACAGAAAGG
GCTTGTCCTGTGGGATTTTCTATGCAACCGCCATTCACCAAGTTTTCACA
CGTTAATCACCATAAGAAGTTTTCGCACTGTGTAGCCACATTGCCGTTGG
GGTTTCTTTTCTGGATTTTTTTCCTTTTCATCGTTTTATTTTTGGGATTT
TCGCTTCTGACGTCGTTACAGTTGTTGTTGTAGCCGGCATTTAGCCGTCT
CGGGAAAAAATAACAACATTTAGCCAAATTACTGTCCCCAGTTATTTAGC
CTCCTTTTTCCACCCTTTCCGCATGCACTTGAAGAAGAAACGTGTACGTT
TGTCAAGATATACAAGATTGCTTTAATGAAAATATGCACGAGTAGTACAT
CGAGTTTTTGAGAAGTGCATGAAAAAATGAAACTTGTAGTTTCTGGAAAA
TTCGCATGTTTCCAAGTTTTGATGTCCTTTGTGTGTGTGTCGCCATTTGC
CTTTCTCAGCGTCTTTGGTTTTGACATTTTGCCTCCTTTACTAAACCACA
CCAACCCCCCCCCCCACACACAATTGCCTTTACCTACCCCACCACACCCC
TTAGTCATACTTCTCCTACGGCAAACAGTTTTTGGTCGTAGTCAACCGCA
TTAATCCATCCCCATCTCAGCGTGTGTGCGTGTGTGTGTGTGTGTTTGTG
GCACAAAATGAAAATGGCAAAACAAGGTCAAGTGTAGGGAGCAAAGTTTG
TTTGAGTGCACACACACGCACACACAAGCTACATACAAATAAGCAAATAA
CACAAAAATAAGAAACATTAAGTTCACATCACTTTTTCATCAAGAGATGC
TCTTCAGATTCATAATTTAATACATTTTAAATGAATTAACATTATAATTT
ATATATACTATATACTTCTTAAGAAATCGAAATGGAATTGTTTTTGCCTT
TTTTTGTAATATTGTTAGGCTATAAAAATCCAACAACGCGTCATTATTTT
TTTTTATTTTTCTAATAAATAAACAAGTTGTTTCGATTTTAATCAGCTGG
TGTATCGAGACTAAGTACATGTGTCACATGTATGTATGTACATAAGTATG
TACATATGTATATTAGATTATATAAGTTAGAACAAGTGAAATCGTTCGAT
AAGGCTTACAAAAATGATTTTTTATTAACAAAACGCCAAAAATAAATGAA
TTGATTAACAAAAAAAAAAAAAAAAAA

FI04012.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:11:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG4004-RA 3559 CG4004-RA 181..2817 1..2637 13080 99.7 Plus
CG4004.b 2570 CG4004.b 531..2570 463..2502 10095 99.6 Plus
CG4004.a 2057 CG4004.a 531..2057 463..1989 7530 99.5 Plus
CG4004-RA 3559 CG4004-RA 2830..3559 2630..3359 3545 99.4 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:45:25
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 12637767..12640670 458..3359 14425 99.9 Plus
chrX 22417052 chrX 12635399..12635861 1..463 2315 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:11:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12746864..12749787 458..3361 14055 98.9 Plus
X 23542271 X 12744488..12744950 1..463 2315 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:29:36
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 12754962..12757141 458..2637 10795 99.6 Plus
X 23527363 X 12757154..12757885 2630..3361 3555 99.4 Plus
X 23527363 X 12752586..12753048 1..463 2315 100 Plus
Blast to na_te.dros performed 2019-03-15 18:45:23
Subject Length Description Subject Range Query Range Score Percent Strand
blood 7410 blood BLOOD 7410bp 3118..3272 1906..2060 163 59.7 Plus
blood 7410 blood BLOOD 7410bp 6851..6934 3094..3013 144 68.2 Minus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 5515..5595 3077..2998 123 63 Minus
Tc1 1666 Tc1 TC1 1666bp 1500..1595 3075..2980 120 58.3 Minus

FI04012.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:46:03 Download gff for FI04012.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 12635399..12635860 1..462 100 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:47:04 Download gff for FI04012.complete
Subject Subject Range Query Range Percent Splice Strand
CG4004-RA 1..960 70..1029 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:17:09 Download gff for FI04012.complete
Subject Subject Range Query Range Percent Splice Strand
CG4004-RA 1..960 70..1029 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:30:05 Download gff for FI04012.complete
Subject Subject Range Query Range Percent Splice Strand
CG4004-RA 1..960 70..1029 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:59:41 Download gff for FI04012.complete
Subject Subject Range Query Range Percent Splice Strand
CG4004-RA 1..960 70..1029 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:56:57 Download gff for FI04012.complete
Subject Subject Range Query Range Percent Splice Strand
CG4004-RA 23..2662 1..2643 99 -> Plus
CG4004-RA 2685..3401 2644..3359 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:17:08 Download gff for FI04012.complete
Subject Subject Range Query Range Percent Splice Strand
CG4004-RA 23..2662 1..2643 99 -> Plus
CG4004-RA 2685..3401 2644..3359 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:30:05 Download gff for FI04012.complete
Subject Subject Range Query Range Percent Splice Strand
CG4004-RA 25..2664 1..2643 99 -> Plus
CG4004-RA 2687..3403 2644..3359 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-27 10:00:11 Download gff for FI04012.complete
Subject Subject Range Query Range Percent Splice Strand
CG4004-RA 23..2662 1..2643 99 -> Plus
CG4004-RA 2685..3401 2644..3359 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:59:41 Download gff for FI04012.complete
Subject Subject Range Query Range Percent Splice Strand
CG4004-RA 25..2664 1..2643 99 -> Plus
CG4004-RA 2687..3403 2644..3359 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:46:03 Download gff for FI04012.complete
Subject Subject Range Query Range Percent Splice Strand
X 12744488..12744949 1..462 100 -> Plus
X 12746869..12749256 463..2830 98 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:46:03 Download gff for FI04012.complete
Subject Subject Range Query Range Percent Splice Strand
X 12744488..12744949 1..462 100 -> Plus
X 12746869..12749256 463..2830 98 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:46:03 Download gff for FI04012.complete
Subject Subject Range Query Range Percent Splice Strand
X 12744488..12744949 1..462 100 -> Plus
X 12746869..12749256 463..2830 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:30:05 Download gff for FI04012.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 12638521..12638982 1..462 100 -> Plus
arm_X 12640902..12643289 463..2830 98 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:48:12 Download gff for FI04012.complete
Subject Subject Range Query Range Percent Splice Strand
X 12752586..12753047 1..462 100 -> Plus
X 12754967..12757354 463..2830 98 -> Plus

FI04012.pep Sequence

Translation from 69 to 1028

> FI04012.pep
MSQMGGTCLYDEPEIMEEFISCYQYFTALWDSSSPDYLSKQKKEPGYQEL
LKILRRVNSNCSIQDVKRKINSLRCCYRREFKKVQESVNGYQTRLWWFHL
MDFLKPVLNIQSPARVKSENVDDSLDETSIQDVDIMSDAFPHEEDMLRLD
AVGDGDVEPEPEPDNDPELDNMDDHVDDYRNNSSAGSIKNNGYQQHTVSS
HQQHNGESQTSDKSGRRIRNRRRRSSNDTDYVEAARKRRNVETSNRDRDW
HRERDRERDRKHESDSEYECELIGKRMASHFRRMRPDQRLFAERIISEVL
VYGRMNRLSFETQFSMGHK*

FI04012.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:07:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21386-PA 511 GF21386-PA 41..166 5..130 554 80.2 Plus
Dana\GF21386-PA 511 GF21386-PA 174..510 14..317 415 37.9 Plus
Dana\GF23799-PA 335 GF23799-PA 23..115 16..105 166 34.4 Plus
Dana\GF23031-PA 351 GF23031-PA 13..100 16..104 153 39.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:07:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17737-PA 534 GG17737-PA 189..534 17..319 683 46.3 Plus
Dere\GG17737-PA 534 GG17737-PA 1..133 1..136 608 81.6 Plus
Dere\GG14454-PA 342 GG14454-PA 23..115 16..105 166 34.4 Plus
Dere\GG23945-PA 355 GG23945-PA 13..100 16..104 149 38.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:07:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12132-PA 183 GH12132-PA 7..142 9..131 445 63.2 Plus
Dgri\GH12134-PA 398 GH12134-PA 338..386 266..314 216 79.6 Plus
Dgri\GH14980-PA 373 GH14980-PA 27..119 16..105 171 35.5 Plus
Dgri\GH12134-PA 398 GH12134-PA 13..179 17..158 162 28.7 Plus
Dgri\GH16644-PA 261 GH16644-PA 11..101 18..105 151 35.2 Plus
Dgri\GH14156-PA 377 GH14156-PA 17..104 16..104 151 38.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG4004-PE 319 CG4004-PE 1..319 1..319 1702 100 Plus
CG4004-PD 319 CG4004-PD 1..319 1..319 1702 100 Plus
CG4004-PA 319 CG4004-PA 1..319 1..319 1702 100 Plus
CG4004-PB 339 CG4004-PB 4..339 29..319 1123 67.6 Plus
CG4004-PC 304 CG4004-PC 115..304 130..319 1003 98.9 Plus
CG8281-PA 348 CG8281-PA 23..115 16..105 166 34.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:07:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15912-PA 455 GI15912-PA 1..132 4..131 500 69.7 Plus
Dmoj\GI15912-PA 455 GI15912-PA 133..439 29..314 328 35.1 Plus
Dmoj\GI13142-PA 361 GI13142-PA 29..121 16..105 168 35.5 Plus
Dmoj\GI12053-PA 234 GI12053-PA 11..101 17..104 151 31.9 Plus
Dmoj\GI22237-PA 359 GI22237-PA 18..105 16..104 151 38.2 Plus
Dmoj\GI11601-PA 248 GI11601-PA 11..100 18..105 149 34.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:07:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13143-PA 543 GL13143-PA 38..171 9..139 497 69.4 Plus
Dper\GL13143-PA 543 GL13143-PA 189..532 17..314 364 31.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:07:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17842-PA 543 GA17842-PA 38..171 9..139 494 69.4 Plus
Dpse\GA17842-PA 543 GA17842-PA 189..532 17..314 368 32.2 Plus
Dpse\GA20952-PA 363 GA20952-PA 24..116 16..105 162 33.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:07:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11582-PA 468 GM11582-PA 130..468 16..319 847 53.8 Plus
Dsec\GM11582-PA 468 GM11582-PA 1..141 1..141 702 90.8 Plus
Dsec\GM25005-PA 348 GM25005-PA 23..115 16..105 166 34.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:07:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24799-PA 148 GD24799-PA 1..131 1..131 681 95.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:07:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16819-PA 495 GJ16819-PA 1..132 4..131 500 67.4 Plus
Dvir\GJ16819-PA 495 GJ16819-PA 432..479 267..314 219 83.3 Plus
Dvir\GJ13890-PA 346 GJ13890-PA 25..117 16..105 170 35.5 Plus
Dvir\GJ13325-PA 258 GJ13325-PA 12..253 18..312 159 22.1 Plus
Dvir\GJ23041-PA 358 GJ23041-PA 17..104 16..104 151 38.2 Plus
Dvir\GJ11280-PA 271 GJ11280-PA 11..100 18..105 147 34.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:07:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25603-PA 258 GK25603-PA 54..254 126..314 221 35.6 Plus
Dwil\GK18054-PA 379 GK18054-PA 28..294 14..308 177 23.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:07:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17027-PA 498 GE17027-PA 1..141 1..141 627 80.1 Plus
Dyak\GE17027-PA 498 GE17027-PA 130..498 16..319 601 47.4 Plus
Dyak\GE21643-PA 342 GE21643-PA 23..115 16..105 164 34.4 Plus
Dyak\GE25667-PA 355 GE25667-PA 13..100 16..104 153 39.3 Plus

FI04012.hyp Sequence

Translation from 69 to 1028

> FI04012.hyp
MSQMGGTCLYDEPEIMEEFISCYQYFTALWDSSSPDYLSKQKKEPGYQEL
LKILRRVNSNCSIQDVKRKINSLRCCYRREFKKVQESVNGYQTRLWWFHL
MDFLKPVLNIQSPARVKSENVDDSLDETSIQDVDIMSDAFPHEEDMLRLD
AVGDGDVEPEPEPDNDPELDNMDDHVDDYRNNSSAGSIKNNGYQQHTVSS
HQQHNGESQTSDKSGRRIRNRRRRSSNDTDYVEAARKRRNVETSNRDRDW
HRERDRERDRKHESDSEYECELIGKRMASHFRRMRPDQRLFAERIISEVL
VYGRMNRLSFETQFSMGHK*

FI04012.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:38:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG4004-PE 319 CG4004-PE 1..319 1..319 1702 100 Plus
CG4004-PD 319 CG4004-PD 1..319 1..319 1702 100 Plus
CG4004-PA 319 CG4004-PA 1..319 1..319 1702 100 Plus
CG4004-PB 339 CG4004-PB 4..339 29..319 1123 67.6 Plus
CG4004-PC 304 CG4004-PC 115..304 130..319 1003 98.9 Plus