Clone FI04038 Report

Search the DGRC for FI04038

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:40
Well:38
Vector:pBS SK-
Associated Gene/TranscriptCG4433-RB
Protein status:FI04038.pep: gold
Sequenced Size:1955

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4433 2008-12-18 5.12 accounting

Clone Sequence Records

FI04038.complete Sequence

1955 bp assembled on 2008-09-12

GenBank Submission: BT044182.1

> FI04038.complete
AACGATGAATGGCAGAAAAGAGTTTATCAATTTATTCGAGTGCCAATTAG
ATAATTTAAGCTTTGTAGATGCACGGCGCACCTGACAGGTTGATTAGAAA
TCGTGAATGAGTCAGCGTGAGTCACGCACCTGCCACGCACCACGCCAGTT
GCCCATCTCTAGCTGCTGCCCCCGAAAGTCGAAAACGCGTAAAGTTTTCG
AATAAAATGCAGAGATTAGCCGATTAGGCGGCGCGCGGGCTCGTAACCAA
ACGTTTTGAAGTATTAAACTACCGATTAAGAAACACATCCACTTAGTGAA
ATAGTTTAAGTAACAGCCCGAGCACCGTTATCGCCGCTTTTCCGCTTTTC
CTCGCTGCCAAATTGCGCTGCATGTCCATTTTTGGTGAAGAATTTCTCGC
CAAAAATCTTGCCCTTGGCCGGACGCAATGAGCGATGAGATTTAACTGGC
TGAGCGAGTACGTGGCCAGCATATCAAGCAGCATTGCATCGACATCCCCG
TGGCGCCAACTGCAGCAGCAGGTGCAGCAGCTCGTCCCCAATCCGCAGGC
CATCTACTGCCGTATCAGGTCATCATCCGCCGAAGCACTGGAGCACGTAC
TGATCGCCTGTGCGGTGTACTTGCTAGTATGCCTGGGCCTCTACAAGCTC
ACCTTCTGGCTCTCGGGAGCCGGATCGGGATCGGGACTGGACGCCCACCA
CAACGGCAACGACACCAGCAATGCCGGGTCGGGCGAGGGGGCAGAGCTGA
ACCCAAGTTCGGATGGCAATCGGAGTCCTGGCGGCCTGAAGCAGGCCCTT
CAGTCCGGAATACGGCTGCGTAGCGTCCGGCTGCCCAAAACGGCGTGCAT
GGAGCGCGTCCTGCTGATCACCGCCCATCCGGATGACGAGTGCATGTTCT
TCGGACCGCTGATCTACTCGCTGACGCAGCGCCAAGGCTGCCAGGTGTAT
ATACTCTGCTTGTCCAACGGCAACTTCGAGCACAAGGCGAAGGTTAGGCG
TCAGGAACTGTGGCGTTCTTGCTCCAAACTGGGCATTCCCGAGTCCAATA
TCGTGCTGATGAATGCCACCAACCTGCCGGACGATCCCTACGTTGACTGG
CGCCCAGATGCGGTGGCCAGCTTGATACTGCACACGATCGAAAGCCTCGA
CATCCAGGCGATATTCACTTTTGATCGGGATGGCGTCAGCTCGCATCCGA
ACCATTGTGCCGTGTATTACGCGGCCGCCTCGCTCTGTTTGGCCAACCTT
TTGCCCAAAGATTGTAAATTCTACACCTTGGACTCGATCAATGTGGTCAG
AAAATATCTATCCATCTTGGACCTGCTGTGCACGTGCTTTATGTCCACGC
ACTGGTGCATACTGAATTGGAAGGAAGCTGCGATTGTGAGGAGTGCGATG
ATGGAGCATCAGTCGCAGATGCGATGGTTTCGCTGGCTCTACATTTACTT
TTCGCGCTACATGTTTATCAATTCGATGCGTCAGATAAATCTCTCGGATG
TGGAGTTGGAAATGCAGATACATGACAACTAACAGGAGGAGGAGGGCGAG
CGATTGAATTGCAAAAGACAAACTACCTTCATGATCGGATGCTCCGCTCC
GAGTGGCAGAGCAAGTGGTTTTTAATTTAAACTCTGACGATTCTACTAGT
ATATATATGTATGTAACTACTACTGTTGGCCAAACGATCGATAGTAATTG
GAAAGCTATATCCAAAACCACGAAGGGAACAAAGAATCAGCGAAGCGGCC
AGTACCATAGGCAACCGAAACCACAAAACAGTCCATTAATTAGTTCCACA
CTCACATATAAAATGGCATATCTTTAATTCTTATTAGTTAGCTCTAATTA
TTATTTATACTCAGTCCAAGCAATGTTCCAAAGTGTGCGATGTAGTCAAG
TGCTTTAAAATTAAATTAAACATGTATGCGTTATTCTAAAAAAAAAAAAA
AAAAA

FI04038.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:00:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG4433-RB 2195 CG4433-RB 37..1974 1..1939 9550 99.5 Plus
CG4433-RA 1999 CG4433-RA 1..970 1..970 4790 99.5 Plus
CG4433-RA 1999 CG4433-RA 1033..1999 970..1937 4755 99.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:30:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 15844284..15845253 970..1 4790 99.6 Minus
chr3R 27901430 chr3R 15842519..15843105 1937..1350 2860 99.5 Minus
chr3R 27901430 chr3R 15843402..15843693 1260..969 1445 99.7 Minus
chr3R 27901430 chr3R 15843160..15843257 1356..1259 475 99 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:12:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:30:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20020347..20021316 970..1 4790 99.6 Minus
3R 32079331 3R 20018580..20019168 1939..1350 2870 99.5 Minus
3R 32079331 3R 20019465..20019756 1260..969 1445 99.7 Minus
3R 32079331 3R 20019223..20019320 1356..1259 475 99 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:19:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 19761178..19762147 970..1 4790 99.5 Minus
3R 31820162 3R 19759411..19759999 1939..1350 2880 99.4 Minus
3R 31820162 3R 19760296..19760587 1260..969 1445 99.6 Minus
3R 31820162 3R 19760054..19760151 1356..1259 475 98.9 Minus
Blast to na_te.dros performed on 2019-03-15 20:30:17 has no hits.

FI04038.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:30:56 Download gff for FI04038.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 15842519..15843100 1355..1937 99 <- Minus
chr3R 15843162..15843255 1261..1354 98 <- Minus
chr3R 15843402..15843692 970..1260 99 <- Minus
chr3R 15844285..15845253 1..969 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:47:13 Download gff for FI04038.complete
Subject Subject Range Query Range Percent Splice Strand
CG4433-RB 1..1098 435..1532 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:00:42 Download gff for FI04038.complete
Subject Subject Range Query Range Percent Splice Strand
CG4433-RB 1..1098 435..1532 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 04:53:49 Download gff for FI04038.complete
Subject Subject Range Query Range Percent Splice Strand
CG4433-RB 1..1098 435..1532 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:37:35 Download gff for FI04038.complete
Subject Subject Range Query Range Percent Splice Strand
CG4433-RB 1..1098 435..1532 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:18:48 Download gff for FI04038.complete
Subject Subject Range Query Range Percent Splice Strand
CG4433-RB 1..1936 1..1937 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:00:42 Download gff for FI04038.complete
Subject Subject Range Query Range Percent Splice Strand
CG4433-RB 1..1936 1..1937 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:53:49 Download gff for FI04038.complete
Subject Subject Range Query Range Percent Splice Strand
CG4433-RB 1..1936 1..1937 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-12 11:09:12 Download gff for FI04038.complete
Subject Subject Range Query Range Percent Splice Strand
CG4433-RB 1..1936 1..1937 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:37:35 Download gff for FI04038.complete
Subject Subject Range Query Range Percent Splice Strand
CG4433-RB 23..1958 1..1937 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:30:56 Download gff for FI04038.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20018582..20019163 1355..1937 99 <- Minus
3R 20019225..20019318 1261..1354 98 <- Minus
3R 20019465..20019755 970..1260 99 <- Minus
3R 20020348..20021316 1..969 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:30:56 Download gff for FI04038.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20018582..20019163 1355..1937 99 <- Minus
3R 20019225..20019318 1261..1354 98 <- Minus
3R 20019465..20019755 970..1260 99 <- Minus
3R 20020348..20021316 1..969 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:30:56 Download gff for FI04038.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20018582..20019163 1355..1937 99 <- Minus
3R 20019225..20019318 1261..1354 98 <- Minus
3R 20019465..20019755 970..1260 99 <- Minus
3R 20020348..20021316 1..969 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:53:49 Download gff for FI04038.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15844304..15844885 1355..1937 99 <- Minus
arm_3R 15844947..15845040 1261..1354 98 <- Minus
arm_3R 15845187..15845477 970..1260 99 <- Minus
arm_3R 15846070..15847038 1..969 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:27:48 Download gff for FI04038.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19759413..19759994 1355..1937 99 <- Minus
3R 19760056..19760149 1261..1354 98 <- Minus
3R 19760296..19760586 970..1260 99 <- Minus
3R 19761179..19762147 1..969 99   Minus

FI04038.pep Sequence

Translation from 434 to 1531

> FI04038.pep
MRFNWLSEYVASISSSIASTSPWRQLQQQVQQLVPNPQAIYCRIRSSSAE
ALEHVLIACAVYLLVCLGLYKLTFWLSGAGSGSGLDAHHNGNDTSNAGSG
EGAELNPSSDGNRSPGGLKQALQSGIRLRSVRLPKTACMERVLLITAHPD
DECMFFGPLIYSLTQRQGCQVYILCLSNGNFEHKAKVRRQELWRSCSKLG
IPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLDIQAIFTFDRDG
VSSHPNHCAVYYAAASLCLANLLPKDCKFYTLDSINVVRKYLSILDLLCT
CFMSTHWCILNWKEAAIVRSAMMEHQSQMRWFRWLYIYFSRYMFINSMRQ
INLSDVELEMQIHDN*

FI04038.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:54:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17341-PA 333 GF17341-PA 1..333 1..365 1533 80.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:55:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15675-PA 362 GG15675-PA 1..362 1..365 1746 95.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:55:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23249-PA 356 GH23249-PA 1..356 1..365 1379 70.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:36:12
Subject Length Description Subject Range Query Range Score Percent Strand
PIG-L-PD 365 CG4433-PD 1..365 1..365 1940 100 Plus
PIG-L-PB 365 CG4433-PB 1..365 1..365 1940 100 Plus
PIG-L-PC 365 CG4433-PC 1..365 1..365 1926 99.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:55:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10317-PA 354 GI10317-PA 1..354 1..365 1375 69.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:55:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12522-PA 354 GL12522-PA 1..354 1..365 1488 77.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:55:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18180-PA 354 GA18180-PA 1..354 1..365 1488 77.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:55:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17700-PA 370 GM17700-PA 1..370 1..365 1908 96.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:55:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20086-PA 367 GD20086-PA 1..367 1..365 1919 97.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:55:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10171-PA 349 GJ10171-PA 1..349 1..365 1382 70.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:55:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22798-PA 346 GK22798-PA 1..346 1..365 1433 74 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:55:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25096-PA 567 GE25096-PA 262..567 57..365 1558 95.1 Plus
Dyak\GE25096-PA 567 GE25096-PA 1..248 1..251 1145 95.2 Plus

FI04038.hyp Sequence

Translation from 434 to 1531

> FI04038.hyp
MRFNWLSEYVASISSSIASTSPWRQLQQQVQQLVPNPQAIYCRIRSSSAE
ALEHVLIACAVYLLVCLGLYKLTFWLSGAGSGSGLDAHHNGNDTSNAGSG
EGAELNPSSDGNRSPGGLKQALQSGIRLRSVRLPKTACMERVLLITAHPD
DECMFFGPLIYSLTQRQGCQVYILCLSNGNFEHKAKVRRQELWRSCSKLG
IPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESLDIQAIFTFDRDG
VSSHPNHCAVYYAAASLCLANLLPKDCKFYTLDSINVVRKYLSILDLLCT
CFMSTHWCILNWKEAAIVRSAMMEHQSQMRWFRWLYIYFSRYMFINSMRQ
INLSDVELEMQIHDN*

FI04038.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:39:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG4433-PD 365 CG4433-PD 1..365 1..365 1940 100 Plus
CG4433-PB 365 CG4433-PB 1..365 1..365 1940 100 Plus
CG4433-PC 365 CG4433-PC 1..365 1..365 1926 99.7 Plus