Clone FI04109 Report

Search the DGRC for FI04109

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:41
Well:9
Vector:pBS SK-
Associated Gene/Transcriptcic-RA
Protein status:FI04109.pep: gold
Sequenced Size:5175

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
cic 2008-08-15 Release 5.9 accounting
cic 2008-12-18 5.12 accounting

Clone Sequence Records

FI04109.complete Sequence

5175 bp assembled on 2008-07-17

GenBank Submission: BT044183.1

> FI04109.complete
CTGTCAAGAGCACAAAAAATAAGTGAAGAGCAAGAACGGAAAAAGCAAAG
CGATGCGAATGCAGCGGACAAAGCGAATGTGACAACTACAACACGACGAC
GAAGGCAGAAAAGTGTATTTTAAGCAGCGGTTGGCCAGCCACAGAGATTT
TCGTGGAAATGCCCAAGAGTAGCGCAAGGACGTCATGAATGCGTTCCAGG
ACTTTGAGCTGGGGGCCAAACTATATCTGCAGTGCTTATTATCGCTGAGC
AGCTCCCGATCTGCCACGCCATCCTACACCTCACCTGTTAACCACGCTGG
AGCTTCTCCTCTGAATGCCATTGCCCATTCGCCGGTGAATGTGTCCGCCA
CTCATAGGCAGAACTTTTTCACACCCATTGCCAACCAGTCGCAGCAGCAA
CAGCAGCAACAGCCTGTGGCGGTACCGCTCGACTCCAAGTGGAAAACAAC
ACCCAGTCCGGTGCTCTACAATGCCAACAACAACAGCAGCAATAACAACA
CCAGCAGCAGCAACAACAACAACAACAGTAACTGGGAGGTGGGCAGCAAT
AGCAATACTCATGTTGCAGCTACGGCAGCAGCAACATCAACAGTTGGCGC
TCAACCACTGCCGCCGCAAACGACACCCGTTTCGCTGGTGATGCACGCCC
CACCGCCGCAGCAGCAACCACTGCAGCAGCAGCACCACCATCACCAACCG
CCTCCACCGCCACCTGCTAGTTTGCCAGCGCCATCGGCACCACCCACCAG
CGGCAGCAGCAGCAGCCACAACAGCGTGGGCCATGCCACCAGCGTTATAC
GCATTTCGAGCAGCCAACAGCAACATCAGCAGCAGCAACAGCACCAACAG
CAGGCACATCCACATGTGGTGGTGAGCGGCGGACAGACTTTTCATCCCGT
AATCGTGGACGCTACTCAGCTATCGGTGCCGCTGCCACCCACAACGGTTT
CATTTCATCAGCCCAACACGCCCACCTCAACAGCGGCATCAGTGGCTTCA
ATGAGCCAGGACAAGATGCTGGCAAAAAACGGCTACAATGCGCCCTGGTT
CAAGCTGTTGCCGCATATGACGCCAATGAGCAAGGCGTCGCCAGCTCCGG
TCACTCCGACCCTAACCACATCGGCCAGCAGTTACAACGTGGTGATGATG
CAACAGCAGCAGCAGCATCAGCAGCTTCAACAACAGCAGCAACTGCAGCA
GCAGCAACAGTCGCCACCCCAGATGCCGCTGAACCACAACAACAATCATC
TGATTGTGTCCGCCCCACTAAGCTCCCCGGGCAAGCCACTCAACTGCTCA
ATGAACGATGCCAAGGTGGCGGCGGCAGCAGCAGCGGCCGCAGTTGCCAA
CCAGAGGCAAAAGCAGCAGCAGGAGGAGCCGGACGATCAGCTGGACGATG
ATGTGTTTGAGACCACAACGCCCGGTATCAGCGCCAACAGCAAAAAACAA
ACTGCGGCAATGCGGCTGCCCACCCACAACAGTAACATACGAAAGCTGGA
GGAATGCCATGATGATGGAGCTGCAGGTGCACCAGCCACTTCGGCTGCCA
AGCGGAGGAGTCAATCGTTGAGCGCCCTGCAGCAACAGCAGCAGCAGCAA
CAGCAGGCCGGTGCGGCAGGAACAGCAGCTGGGCAGCCGGCGAACAAGAA
AATCCGAAGACCCATGAACGCTTTTATGATCTTCTCAAAGAAACATCGGA
AAATGGTGCACAAGAAGCATCCGAATCAGGACAACCGTACGGTCAGCAAG
ATTCTGGGCGAGTGGTGGTACGCCCTGAAGCCAGAGCAAAAGGCTCAGTA
CCACGAGCTGGCCAGCTCTGTTAAGGATGCACACTTCAAGCTGCATCCGG
AGTGGAAGTGGTGCTCCAAAGATCGCCGCAAGTCATCCACCTCGACAGCA
ACGCCTGGTGGAAAGGCGAGCGGAGCGGCCGGAACAGGTGACGCTAAGCA
GCGCCTGGTATCGGTGGATGGCTCCGATTCCTTGGAGCACGATATGTGCC
CCTCAACGCCAGGAGGCAGCGGCAGCTGCGGTGGCCAGGGCATATCATCC
GATTTGCAGGGCGATATTATACCGCTGACAATTGACAACTACAATAGCAC
CTGTGATGAGGCGCCAACTACGATCTCGATGAAGGGCAATGGCAACGGAA
AGCTGATGAAGAACGAGCTGCCATCGGACGAGGACGAACAGATGCTGGTA
GTGGAGGAGGAGCAGCAACAGCAGACCGTAAAGAAGATTGACCTGCACTG
CCGCGAGCGGGTGAATGACTCGGACATGGACGACACACCCTTTGACTACC
GCAAGCAGCAGCCAGAGGCAAATCAGCGTTCGGCAGAGGAGCACAGTACA
TCCGGTGCGAATGGCCAGGCCATAAACGCACCGCCGCTCAGCGGAGGAGA
GCGCGAGATCACACTCAAACCGAAGGCTATCAAAGCACATCCGGTGCTGG
AGAGCAACATGCTGCCATATACCCAGATGTCCATCTACACGCAGTACACT
AGTCCCAAGAACCCAATCGGTGTAACACCATTCCAACCCACAGGCGGCGC
CTTCAAATCGATGCCCATCAGCCCCAAGGGCAGCGGTGGCAAGCCGGAGG
ACGCTGGCTCCCTGCAGGCACACATCAAGCAGGAGGACATCAAACAGGAA
CCGCCATCGCCATACAAGCTGAACAATGGTTCGGGATCCGCCTCCGGAGG
GGGCGTGGTCAGTGCTCCGCCGCCGAATAGTGGTAGCGTTGGTGCCATAT
TCAACTTCAATGTGCCAACGGCGACGGCTTTGAGTCAGAAGCAGTTTCAC
TACCCGATGCATCATCCTCATCGCAGTCCCACAGATCTTAGAGCTGCCCA
CCAGGCGTGTGTGCCATCGTCGCCAGCGGGCATGGGACTGGGGCATGCGG
CCAACATTGCCACGCCTCCAGCATCGGCGCCGGCCCAGATCATGGGAGGC
GGTCCAGCCAGTCAGAAGATGTTCTTCGCCATGACTCATCCGTATACGTT
GCTGCAGCGCTCCCACCAACCGGGCACCCCCAGCCTAGAGCACTTGCAGC
TGGACGCTTTTGCGCCAGGAGGTTACACCTTGAGGAACCACAATGGCCTG
TCTTCCCTGCCACCGCCCGTGAGTGCGCAACCCACGATGCTGCTGCACGG
ATACCCGCCCAGCCATGGTGTCGAACCACCGGCTAGATCGCCATCGTACA
AATCAATGCCATCTACTCCAAAGTCGGCCACATATCTCATGAGTGCGCCA
CCGGAGCGAGGCATGGATGGAGGAATGAGTGGATGTGCATCAGCAGCGGC
AAGCGGAGGCGATGAAAGCGACATAGATGCGGATGGCCAGCAGTTTATTT
TGGCACCCACGCCTGCGCAGTTGGGTCGAGCTCCACTGCAGAGGAGGAAG
AATCTATCTCAAAGCAAGTCAGAGAGCAATGTGTCCTTTGGCGCTAATCT
GGGGGCCAGCAATGGACAGCACATTAGTCGCAAGCTGCACTCACCCACAA
TGATGGAATCCTCATCGCCCATCATAGGCCACGTGAACAGCAGCAACCTC
AGCTCGGCCCTGCCAACGCCCACGTCCTCGACGACGACACCAAACAGTGA
TGAGCAACTGCCACTGACGCCGACAACCAGCAGCAGCAACAGTAACTTAA
ATCAGCAGCAGCCCAAGTCACCGATGAAAGGTGCTCCAGGATCAACGGCA
GCGGCCCTAAAAAAGAAGAACGATGAGATGAATAACAGTGTGCTCAAGCA
GGTAGATTTCGAAAAGAAATACAAGGCCCTGCCGCAGTTCCAGCCTGAGG
ATTGCCAGTCGCCCAGTGCCATTGCTGTGCCCTCATCGCCACGCGTTTAC
GGCACGAATTACCGCAAGAAGAACACGGCTCCACCGCCAGTTCAGAAGCT
AATGTGCGAGGACGACTCCATTGACGAACCAGCATCGGCACCGCCTACGA
CCACACAGCGATTCTTTGGTCCGGACTTTAACAATGAGCTAAAGGAACTG
GAGAGCTCTGACCAAACGGGCCGCTCACCCAGGACGCCAAAGACACCGCT
ACAAAGCGCTCGGTCCGATGCCAGTGAGAAAGGACACCGCAAGGTCCTGG
AGACGCGTCGCAGCCTGGTCTTGCAGTTGTTTGCCGAGCACGGTAACTTC
CCCACTGCCCAGGCCACTATGGCCTTTCAGTCTAAGCACAGCGATGTCTT
TCCGCGCAAGCAAGATCTGCAGCTGAAGATACGAGAGGTGCGCCAGAAGC
TGCTGGGCCAAGCATCTTGCACTCCACACTCGGCGGGCCCCAACACGCCG
TCCGACTCCAACTCGTCGTCGACCACATTGAGTGCCAGTAGCACCAGCTT
GAATATGCAGACCACCAGTGCGGCAGATGTTTTTCAATATTACTGAACAA
CAGGTGGCCACCAGCAACAGCACTCTGAGCAGCAGCCCCATTCCGCCACC
AAAGCCACTGAATCTGATGCCAAGTACAAGTAATGGGGCGTGGACAAGGA
CGAGGAGTTCGGCGGGGACAGGACAGGACAATGGATTGTTTGCTGCAAGT
GACAAAATTACTTAAGGATAGTAAACGAATCGACAACAACAATTGCAGCA
ACGCAGACTCACAAAACGAAACGGATGTGCAACAAAGCTCACACTTAGCA
AACGCTCATGCATCAGATGCATGGTTAACTAGTTTTTATTATTAACTGCT
AATAGCGAGGAAGCAAAACATACAGAAAATAGAGAAAATTACAAATTTTT
AATTACAATAGGCATACGAAATATGTACAAGCAACGTAATTTGTGAGTCG
AGTGGAGAAACTGATTACAAATGAATTTATTAAGCAGCTTAATAAATCGG
GAGAAGTAGAAATTTTGATGAAAATTTGAACTTTTGAAGCACATATGAAG
TACATACATACATAAATAGAAAACATACATAATCGAAACATTGTATAATC
CCCGCGTAAAGGCTTAGGTTTTAATTTACAGGCAAAACTGCAACCAACAA
ATTGGAAGAGCAAAGAAAGAACTACGGAAATAGAAGTTAAGCTTTAACTT
AAATTGCACATTAATTTTGAAGTGTATCAAGCACAAGCAAAGAATTGTAT
AAATCAAACAGTAAGAAACTTGAAATAAACACTGTAGTTGTATTGTAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA

FI04109.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:04:20
Subject Length Description Subject Range Query Range Score Percent Strand
cic-RA 5146 cic-RA 1..5146 1..5146 25730 100 Plus
cic-RB 6433 cic-RB 1..2843 1..2843 14215 100 Plus
cic.b 6656 cic.b 1..2843 1..2843 14215 100 Plus
cic-RB 6433 cic-RB 4129..6433 2842..5146 11525 100 Plus
cic.b 6656 cic.b 4129..5663 2842..4376 7675 100 Plus
cic.b 6656 cic.b 5661..6407 4401..5147 3735 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:41:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 16118524..16119819 1031..2326 6435 99.8 Plus
chr3R 27901430 chr3R 16117573..16118365 240..1032 3950 99.9 Plus
chr3R 27901430 chr3R 16124577..16125349 4374..5146 3865 100 Plus
chr3R 27901430 chr3R 16122567..16122982 2992..3407 2080 100 Plus
chr3R 27901430 chr3R 16123053..16123380 3408..3735 1640 100 Plus
chr3R 27901430 chr3R 16120170..16120471 2542..2843 1510 100 Plus
chr3R 27901430 chr3R 16117236..16117474 1..239 1195 100 Plus
chr3R 27901430 chr3R 16119877..16120099 2324..2546 1085 99.1 Plus
chr3R 27901430 chr3R 16124186..16124384 4178..4376 995 100 Plus
chr3R 27901430 chr3R 16123939..16124124 3995..4180 930 100 Plus
chr3R 27901430 chr3R 16123437..16123603 3736..3902 835 100 Plus
chr3R 27901430 chr3R 16122354..16122504 2842..2992 755 100 Plus
chr3R 27901430 chr3R 16123673..16123765 3903..3995 465 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:12:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:41:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20294553..20295848 1031..2326 6480 100 Plus
3R 32079331 3R 20293602..20294394 240..1032 3965 100 Plus
3R 32079331 3R 20300605..20301378 4374..5147 3870 100 Plus
3R 32079331 3R 20298595..20299010 2992..3407 2080 100 Plus
3R 32079331 3R 20299081..20299408 3408..3735 1640 100 Plus
3R 32079331 3R 20296198..20296499 2542..2843 1510 100 Plus
3R 32079331 3R 20293265..20293503 1..239 1195 100 Plus
3R 32079331 3R 20295906..20296128 2324..2546 1115 100 Plus
3R 32079331 3R 20300214..20300412 4178..4376 995 100 Plus
3R 32079331 3R 20299967..20300152 3995..4180 930 100 Plus
3R 32079331 3R 20299465..20299631 3736..3902 835 100 Plus
3R 32079331 3R 20298382..20298532 2842..2992 755 100 Plus
3R 32079331 3R 20299701..20299793 3903..3995 465 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:22:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 20035384..20036679 1031..2326 6480 100 Plus
3R 31820162 3R 20034433..20035225 240..1032 3965 100 Plus
3R 31820162 3R 20041436..20042209 4374..5147 3870 100 Plus
3R 31820162 3R 20039426..20039841 2992..3407 2080 100 Plus
3R 31820162 3R 20039912..20040239 3408..3735 1640 100 Plus
3R 31820162 3R 20037029..20037330 2542..2843 1510 100 Plus
3R 31820162 3R 20034096..20034334 1..239 1195 100 Plus
3R 31820162 3R 20036737..20036959 2324..2546 1115 100 Plus
3R 31820162 3R 20041045..20041243 4178..4376 995 100 Plus
3R 31820162 3R 20040798..20040983 3995..4180 930 100 Plus
3R 31820162 3R 20040296..20040462 3736..3902 835 100 Plus
3R 31820162 3R 20039213..20039363 2842..2992 755 100 Plus
3R 31820162 3R 20040532..20040624 3903..3995 465 100 Plus
Blast to na_te.dros performed 2019-03-16 06:41:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..3034 481..1239 465 57 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6728..7079 475..842 425 62.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2315..2896 643..1253 374 57.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..7197 392..852 352 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2348..2839 391..861 339 57.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2355..2960 653..1245 313 55.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6421..6923 360..845 312 56.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2452..2932 384..864 305 56.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..7033 567..853 289 59.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2640..3040 475..870 261 56.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6888 693..864 258 65.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2983 726..1371 244 54.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2379..2763 475..867 239 57.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2631..3012 383..772 232 57.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6770..6899 650..775 226 67.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..6957 391..598 221 60.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2219..2520 466..775 209 56.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2783..2980 391..592 206 59.1 Plus
roo 9092 roo DM_ROO 9092bp 1036..1154 471..591 204 64.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2304..2629 1314..1627 195 56.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6769..6900 391..527 195 63.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6795..7040 384..623 192 58.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6862..7199 375..713 167 55.5 Plus
roo 9092 roo DM_ROO 9092bp 1050..1170 658..788 153 63.4 Plus
roo 9092 roo DM_ROO 9092bp 1060..1175 649..773 144 62.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1539..1581 659..701 134 79.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6805..6879 1319..1395 128 64.9 Plus
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 1376..1452 5057..5131 127 66.2 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 886..999 662..775 119 61.9 Plus

FI04109.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:42:37 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 16123940..16124124 3996..4180 100 -> Plus
chr3R 16117573..16117810 240..477 100 == Plus
chr3R 16117925..16117987 592..654 100 == Plus
chr3R 16117236..16117474 1..239 100 -> Plus
chr3R 16123437..16123603 3736..3902 100 -> Plus
chr3R 16118109..16118364 776..1031 82 -> Plus
chr3R 16118525..16118619 1032..1126 100 == Plus
chr3R 16118703..16118811 1210..1318 100 == Plus
chr3R 16118873..16119819 1380..2326 96 -> Plus
chr3R 16119880..16120096 2327..2543 99 -> Plus
chr3R 16120172..16120471 2544..2843 100 -> Plus
chr3R 16122356..16122504 2844..2992 100 -> Plus
chr3R 16122568..16122982 2993..3407 100 -> Plus
chr3R 16123053..16123380 3408..3735 100 -> Plus
chr3R 16123673..16123765 3903..3995 100 -> Plus
chr3R 16124189..16124384 4181..4376 100 -> Plus
chr3R 16124580..16125349 4377..5146 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:47:20 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
cic-RA 1..4212 185..4396 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:06:13 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
cic-RA 1..4212 185..4396 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:33:25 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
cic-RA 1..4212 185..4396 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:53:39 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
cic-RA 1..4212 185..4396 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:19:40 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
cic-RA 1..4212 185..4396 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:29:36 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
cic-RA 1..5143 2..5144 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:06:13 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
cic-RE 1..5146 1..5146 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:33:25 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
cic-RA 22..5167 1..5146 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:53:39 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
cic-RA 1..5143 2..5144 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:19:40 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
cic-RA 22..5167 1..5146 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:42:37 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20298384..20298532 2844..2992 100 -> Plus
3R 20293265..20293503 1..239 100 -> Plus
3R 20293602..20294393 240..1031 100 -> Plus
3R 20294554..20295848 1032..2326 100 -> Plus
3R 20295909..20296125 2327..2543 100 -> Plus
3R 20296200..20296499 2544..2843 100 -> Plus
3R 20298596..20299010 2993..3407 100 -> Plus
3R 20299081..20299408 3408..3735 100 -> Plus
3R 20299465..20299631 3736..3902 100 -> Plus
3R 20299701..20299793 3903..3995 100 -> Plus
3R 20299968..20300152 3996..4180 100 -> Plus
3R 20300217..20300412 4181..4376 100 -> Plus
3R 20300608..20301377 4377..5146 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:42:37 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20298384..20298532 2844..2992 100 -> Plus
3R 20293265..20293503 1..239 100 -> Plus
3R 20293602..20294393 240..1031 100 -> Plus
3R 20294554..20295848 1032..2326 100 -> Plus
3R 20295909..20296125 2327..2543 100 -> Plus
3R 20296200..20296499 2544..2843 100 -> Plus
3R 20298596..20299010 2993..3407 100 -> Plus
3R 20299081..20299408 3408..3735 100 -> Plus
3R 20299465..20299631 3736..3902 100 -> Plus
3R 20299701..20299793 3903..3995 100 -> Plus
3R 20299968..20300152 3996..4180 100 -> Plus
3R 20300217..20300412 4181..4376 100 -> Plus
3R 20300608..20301377 4377..5146 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:42:37 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20298384..20298532 2844..2992 100 -> Plus
3R 20293265..20293503 1..239 100 -> Plus
3R 20293602..20294393 240..1031 100 -> Plus
3R 20294554..20295848 1032..2326 100 -> Plus
3R 20295909..20296125 2327..2543 100 -> Plus
3R 20296200..20296499 2544..2843 100 -> Plus
3R 20298596..20299010 2993..3407 100 -> Plus
3R 20299081..20299408 3408..3735 100 -> Plus
3R 20299465..20299631 3736..3902 100 -> Plus
3R 20299701..20299793 3903..3995 100 -> Plus
3R 20299968..20300152 3996..4180 100 -> Plus
3R 20300217..20300412 4181..4376 100 -> Plus
3R 20300608..20301377 4377..5146 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:33:25 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16125939..16126134 4181..4376 100 -> Plus
arm_3R 16118987..16119225 1..239 100 -> Plus
arm_3R 16119324..16120115 240..1031 100 -> Plus
arm_3R 16125690..16125874 3996..4180 100 -> Plus
arm_3R 16120276..16121570 1032..2326 100 -> Plus
arm_3R 16121631..16121847 2327..2543 100 -> Plus
arm_3R 16121922..16122221 2544..2843 100 -> Plus
arm_3R 16124106..16124254 2844..2992 100 -> Plus
arm_3R 16124318..16124732 2993..3407 100 -> Plus
arm_3R 16124803..16125130 3408..3735 100 -> Plus
arm_3R 16125187..16125353 3736..3902 100 -> Plus
arm_3R 16125423..16125515 3903..3995 100 -> Plus
arm_3R 16126330..16127099 4377..5146 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:35:09 Download gff for FI04109.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20040799..20040983 3996..4180 100 -> Plus
3R 20039912..20040239 3408..3735 100 -> Plus
3R 20040296..20040462 3736..3902 100 -> Plus
3R 20036740..20036956 2327..2543 100 -> Plus
3R 20041048..20041243 4181..4376 100 -> Plus
3R 20040532..20040624 3903..3995 100 -> Plus
3R 20039427..20039841 2993..3407 100 -> Plus
3R 20034096..20034334 1..239 100 -> Plus
3R 20034433..20035224 240..1031 100 -> Plus
3R 20035385..20036679 1032..2326 100 -> Plus
3R 20037031..20037330 2544..2843 100 -> Plus
3R 20039215..20039363 2844..2992 100 -> Plus
3R 20041439..20042208 4377..5146 100   Plus

FI04109.pep Sequence

Translation from 184 to 4395

> FI04109.pep
MNAFQDFELGAKLYLQCLLSLSSSRSATPSYTSPVNHAGASPLNAIAHSP
VNVSATHRQNFFTPIANQSQQQQQQQPVAVPLDSKWKTTPSPVLYNANNN
SSNNNTSSSNNNNNSNWEVGSNSNTHVAATAAATSTVGAQPLPPQTTPVS
LVMHAPPPQQQPLQQQHHHHQPPPPPPASLPAPSAPPTSGSSSSHNSVGH
ATSVIRISSSQQQHQQQQQHQQQAHPHVVVSGGQTFHPVIVDATQLSVPL
PPTTVSFHQPNTPTSTAASVASMSQDKMLAKNGYNAPWFKLLPHMTPMSK
ASPAPVTPTLTTSASSYNVVMMQQQQQHQQLQQQQQLQQQQQSPPQMPLN
HNNNHLIVSAPLSSPGKPLNCSMNDAKVAAAAAAAAVANQRQKQQQEEPD
DQLDDDVFETTTPGISANSKKQTAAMRLPTHNSNIRKLEECHDDGAAGAP
ATSAAKRRSQSLSALQQQQQQQQQAGAAGTAAGQPANKKIRRPMNAFMIF
SKKHRKMVHKKHPNQDNRTVSKILGEWWYALKPEQKAQYHELASSVKDAH
FKLHPEWKWCSKDRRKSSTSTATPGGKASGAAGTGDAKQRLVSVDGSDSL
EHDMCPSTPGGSGSCGGQGISSDLQGDIIPLTIDNYNSTCDEAPTTISMK
GNGNGKLMKNELPSDEDEQMLVVEEEQQQQTVKKIDLHCRERVNDSDMDD
TPFDYRKQQPEANQRSAEEHSTSGANGQAINAPPLSGGEREITLKPKAIK
AHPVLESNMLPYTQMSIYTQYTSPKNPIGVTPFQPTGGAFKSMPISPKGS
GGKPEDAGSLQAHIKQEDIKQEPPSPYKLNNGSGSASGGGVVSAPPPNSG
SVGAIFNFNVPTATALSQKQFHYPMHHPHRSPTDLRAAHQACVPSSPAGM
GLGHAANIATPPASAPAQIMGGGPASQKMFFAMTHPYTLLQRSHQPGTPS
LEHLQLDAFAPGGYTLRNHNGLSSLPPPVSAQPTMLLHGYPPSHGVEPPA
RSPSYKSMPSTPKSATYLMSAPPERGMDGGMSGCASAAASGGDESDIDAD
GQQFILAPTPAQLGRAPLQRRKNLSQSKSESNVSFGANLGASNGQHISRK
LHSPTMMESSSPIIGHVNSSNLSSALPTPTSSTTTPNSDEQLPLTPTTSS
SNSNLNQQQPKSPMKGAPGSTAAALKKKNDEMNNSVLKQVDFEKKYKALP
QFQPEDCQSPSAIAVPSSPRVYGTNYRKKNTAPPPVQKLMCEDDSIDEPA
SAPPTTTQRFFGPDFNNELKELESSDQTGRSPRTPKTPLQSARSDASEKG
HRKVLETRRSLVLQLFAEHGNFPTAQATMAFQSKHSDVFPRKQDLQLKIR
EVRQKLLGQASCTPHSAGPNTPSDSNSSSTTLSASSTSLNMQTTSAADVF
QYY*

FI04109.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:02:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17645-PA 1819 GF17645-PA 1..1406 1..1396 4833 76.4 Plus
Dana\GF20922-PA 816 GF20922-PA 354..453 491..589 221 41 Plus
Dana\GF12898-PA 784 GF12898-PA 207..307 477..577 200 36.6 Plus
Dana\GF18413-PA 541 GF18413-PA 65..169 481..581 164 34.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:02:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23823-PA 1409 GG23823-PA 1..1409 1..1403 5733 92.6 Plus
Dere\GG19727-PA 766 GG19727-PA 293..361 491..559 216 47.8 Plus
Dere\GG22439-PA 789 GG22439-PA 203..302 478..577 194 36 Plus
Dere\GG13733-PA 382 GG13733-PA 124..240 472..588 163 31.6 Plus
Dere\GG16436-PA 616 GG16436-PA 423..552 490..612 161 32.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:03:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23608-PA 1534 GH23608-PA 1..1492 1..1388 3544 63.1 Plus
Dgri\GH20045-PA 817 GH20045-PA 222..319 489..584 179 36.7 Plus
Dgri\GH24007-PA 682 GH24007-PA 473..548 490..565 158 36.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:30
Subject Length Description Subject Range Query Range Score Percent Strand
cic-PA 1403 CG5067-PA 1..1403 1..1403 7357 100 Plus
cic-PC 1427 CG43122-PC 1..1401 1..1397 7290 99.6 Plus
cic-PD 2141 CG43122-PD 756..2141 18..1403 7263 99.9 Plus
cic-PG 2150 CG43122-PG 760..2150 18..1403 7247 99.6 Plus
cic-PH 1275 CG43122-PH 1..1249 153..1397 6503 99.5 Plus
cic-PB 1832 CG5067-PB 1..886 1..886 4670 100 Plus
cic-PB 1832 CG5067-PB 1269..1832 830..1403 2696 91.9 Plus
Smr-PF 3601 CG4013-PF 14..345 91..474 230 26.8 Plus
Smr-PE 3601 CG4013-PE 14..345 91..474 230 26.8 Plus
Smr-PD 3601 CG4013-PD 14..345 91..474 230 26.8 Plus
Smr-PG 3607 CG4013-PG 14..351 91..474 229 27.3 Plus
CG10543-PD 1631 CG10543-PD 1028..1494 66..477 214 26.4 Plus
CG10543-PE 1634 CG10543-PE 1031..1497 66..477 214 26.4 Plus
CG10543-PA 1634 CG10543-PA 1031..1497 66..477 214 26.4 Plus
CG10543-PF 1635 CG10543-PF 1032..1498 66..477 214 26.4 Plus
bbx-PE 769 CG1414-PE 208..387 396..580 210 28.1 Plus
bbx-PD 769 CG1414-PD 208..387 396..580 210 28.1 Plus
bbx-PC 769 CG1414-PC 208..387 396..580 210 28.1 Plus
bbx-PB 769 CG1414-PB 208..387 396..580 210 28.1 Plus
dikar-PG 3080 CG42799-PG 2043..2468 23..474 201 23.9 Plus
dikar-PC 3080 CG42799-PC 2043..2468 23..474 201 23.9 Plus
dikar-PD 3222 CG42799-PD 2185..2610 23..474 201 23.9 Plus
dikar-PF 3261 CG42799-PF 2185..2610 23..474 201 23.9 Plus
Sox15-PA 784 CG8404-PA 204..402 479..664 200 28.5 Plus
CG17233-PI 772 CG17233-PI 43..532 18..489 199 23.6 Plus
CG17233-PD 772 CG17233-PD 43..532 18..489 199 23.6 Plus
CG17233-PA 1173 CG17233-PA 43..532 18..489 199 23.6 Plus
Ptip-PA 2294 CG32133-PA 588..977 68..493 199 24.7 Plus
SoxN-PA 572 CG18024-PA 55..260 350..573 198 24.1 Plus
SoxN-PB 761 CG18024-PB 55..260 350..573 198 24.1 Plus
Doa-PY 1535 CG42320-PY 669..1151 21..525 195 23.3 Plus
Doa-PP 2045 CG42320-PP 1179..1661 21..525 195 23.3 Plus
Doa-PK 832 CG33553-PC 5..448 60..525 191 24.1 Plus
bun-PG 1331 CG42281-PJ 520..933 32..414 191 24.2 Plus
Tet-PD 2056 CG43444-PD 88..517 22..461 190 24.8 Plus
Tet-PC 2056 CG43444-PC 88..517 22..461 190 24.8 Plus
Tet-PA 2860 CG43444-PA 892..1321 22..461 190 24.8 Plus
Tet-PE 2866 CG43444-PE 898..1327 22..461 190 24.8 Plus
Tet-PB 2915 CG43444-PB 947..1376 22..461 190 24.8 Plus
Tet-PF 2921 CG43444-PF 953..1382 22..461 190 24.8 Plus
kis-PF 5191 CG3696-PF 289..721 39..475 190 25.1 Plus
kis-PE 5252 CG3696-PE 289..721 39..475 190 25.1 Plus
kis-PA 5322 CG3696-PA 289..721 39..475 190 25.1 Plus
kis-PD 5343 CG3696-PD 289..721 39..475 190 25.1 Plus
kis-PC 5517 CG3696-PC 289..721 39..475 190 25.1 Plus
bun-PF 1097 CG42281-PM 520..948 32..431 188 22.9 Plus
bun-PA 1206 CG42281-PK 629..1057 32..431 188 22.9 Plus
CG16711-PC 1497 CG16711-PC 960..1436 12..487 188 21.7 Plus
dikar-PG 3080 CG42799-PG 2154..2598 30..473 184 22.6 Plus
dikar-PC 3080 CG42799-PC 2154..2598 30..473 184 22.6 Plus
dikar-PD 3222 CG42799-PD 2296..2740 30..473 184 22.6 Plus
dikar-PF 3261 CG42799-PF 2296..2740 30..473 184 22.6 Plus
Sox102F-PD 580 CG11153-PD 30..516 195..614 183 22.6 Plus
Sox102F-PC 580 CG11153-PC 30..516 195..614 183 22.6 Plus
Sox21a-PA 388 CG7345-PA 109..249 478..631 182 29.9 Plus
Sox21a-PB 407 CG7345-PB 109..249 478..631 182 29.9 Plus
dikar-PG 3080 CG42799-PG 2531..2893 68..496 168 23.2 Plus
dikar-PC 3080 CG42799-PC 2531..2893 68..496 168 23.2 Plus
dikar-PD 3222 CG42799-PD 2673..3035 68..496 168 23.2 Plus
dikar-PF 3261 CG42799-PF 2673..3035 68..496 168 23.2 Plus
kis-PF 5191 CG3696-PF 175..573 70..475 166 23.3 Plus
kis-PE 5252 CG3696-PE 175..573 70..475 166 23.3 Plus
kis-PA 5322 CG3696-PA 175..573 70..475 166 23.3 Plus
kis-PD 5343 CG3696-PD 175..573 70..475 166 23.3 Plus
kis-PC 5517 CG3696-PC 175..573 70..475 166 23.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:03:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22721-PA 1417 GI22721-PA 1..1409 1..1393 3664 65.5 Plus
Dmoj\GI21541-PA 601 GI21541-PA 305..402 462..559 220 38.8 Plus
Dmoj\GI20453-PA 825 GI20453-PA 208..294 489..575 182 37.9 Plus
Dmoj\GI14086-PA 496 GI14086-PA 268..370 470..565 160 33 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:03:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12097-PA 1163 GL12097-PA 1..866 1..834 2029 64.6 Plus
Dper\GL17288-PA 786 GL17288-PA 215..303 489..577 190 38.2 Plus
Dper\GL20955-PA 269 GL20955-PA 196..268 467..531 165 43.8 Plus
Dper\GL15612-PA 599 GL15612-PA 392..467 490..565 160 36.8 Plus
Dper\GL24831-PA 403 GL24831-PA 150..248 490..588 159 33.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA30228-PB 1450 GA30228-PB 11..1450 6..1403 4316 70.6 Plus
Dpse\GA30228-PA 2156 GA30228-PA 739..2156 27..1403 4290 71 Plus
Dpse\GA30228-PC 1874 GA30228-PC 1..937 1..886 2214 65 Plus
Dpse\GA30228-PC 1874 GA30228-PC 1352..1855 887..1399 2095 83.4 Plus
Dpse\GA30228-PD 858 GA30228-PD 11..836 2..787 1834 61.9 Plus
Dpse\GA16961-PA 798 GA16961-PA 270..370 467..559 223 41.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23104-PA 1398 GM23104-PA 1..1398 1..1403 7184 97.1 Plus
Dsec\GM23082-PA 789 GM23082-PA 297..386 465..559 214 42.1 Plus
Dsec\GM26750-PA 66 GM26750-PA 2..59 730..787 201 65.5 Plus
Dsec\GM20225-PA 784 GM20225-PA 203..317 478..588 196 34.8 Plus
Dsec\GM24555-PA 382 GM24555-PA 124..240 472..588 163 31.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:03:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19345-PA 1406 GD19345-PA 1..1406 1..1403 7228 97.5 Plus
Dsim\GD12627-PA 382 GD12627-PA 124..240 472..588 163 31.6 Plus
Dsim\Sox102F-PA 617 GD24371-PA 422..497 490..565 158 36.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:03:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23448-PA 1467 GJ23448-PA 1..1429 1..1397 3604 64.5 Plus
Dvir\GJ16014-PA 793 GJ16014-PA 341..409 491..559 213 47.8 Plus
Dvir\GJ22304-PA 802 GJ22304-PA 210..320 489..591 185 34.2 Plus
Dvir\GJ16151-PA 669 GJ16151-PA 411..541 445..565 163 31.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:03:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10919-PA 1464 GK10919-PA 1..1416 1..1382 3614 63 Plus
Dwil\GK25081-PA 579 GK25081-PA 134..202 491..559 216 47.8 Plus
Dwil\GK21748-PA 784 GK21748-PA 212..308 478..574 180 35.1 Plus
Dwil\GK13587-PA 935 GK13587-PA 743..818 490..565 162 36.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:03:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25659-PA 1382 GE25659-PA 1..1382 1..1403 5696 91.6 Plus
Dyak\GE17925-PA 771 GE17925-PA 240..368 426..559 215 35.1 Plus
Dyak\GE12330-PA 791 GE12330-PA 203..317 478..588 197 34.8 Plus
Dyak\GE10918-PA 545 GE10918-PA 65..178 481..585 158 32.8 Plus
Dyak\GE20027-PA 381 GE20027-PA 124..240 472..588 157 30.8 Plus

FI04109.hyp Sequence

Translation from 184 to 4395

> FI04109.hyp
MNAFQDFELGAKLYLQCLLSLSSSRSATPSYTSPVNHAGASPLNAIAHSP
VNVSATHRQNFFTPIANQSQQQQQQQPVAVPLDSKWKTTPSPVLYNANNN
SSNNNTSSSNNNNNSNWEVGSNSNTHVAATAAATSTVGAQPLPPQTTPVS
LVMHAPPPQQQPLQQQHHHHQPPPPPPASLPAPSAPPTSGSSSSHNSVGH
ATSVIRISSSQQQHQQQQQHQQQAHPHVVVSGGQTFHPVIVDATQLSVPL
PPTTVSFHQPNTPTSTAASVASMSQDKMLAKNGYNAPWFKLLPHMTPMSK
ASPAPVTPTLTTSASSYNVVMMQQQQQHQQLQQQQQLQQQQQSPPQMPLN
HNNNHLIVSAPLSSPGKPLNCSMNDAKVAAAAAAAAVANQRQKQQQEEPD
DQLDDDVFETTTPGISANSKKQTAAMRLPTHNSNIRKLEECHDDGAAGAP
ATSAAKRRSQSLSALQQQQQQQQQAGAAGTAAGQPANKKIRRPMNAFMIF
SKKHRKMVHKKHPNQDNRTVSKILGEWWYALKPEQKAQYHELASSVKDAH
FKLHPEWKWCSKDRRKSSTSTATPGGKASGAAGTGDAKQRLVSVDGSDSL
EHDMCPSTPGGSGSCGGQGISSDLQGDIIPLTIDNYNSTCDEAPTTISMK
GNGNGKLMKNELPSDEDEQMLVVEEEQQQQTVKKIDLHCRERVNDSDMDD
TPFDYRKQQPEANQRSAEEHSTSGANGQAINAPPLSGGEREITLKPKAIK
AHPVLESNMLPYTQMSIYTQYTSPKNPIGVTPFQPTGGAFKSMPISPKGS
GGKPEDAGSLQAHIKQEDIKQEPPSPYKLNNGSGSASGGGVVSAPPPNSG
SVGAIFNFNVPTATALSQKQFHYPMHHPHRSPTDLRAAHQACVPSSPAGM
GLGHAANIATPPASAPAQIMGGGPASQKMFFAMTHPYTLLQRSHQPGTPS
LEHLQLDAFAPGGYTLRNHNGLSSLPPPVSAQPTMLLHGYPPSHGVEPPA
RSPSYKSMPSTPKSATYLMSAPPERGMDGGMSGCASAAASGGDESDIDAD
GQQFILAPTPAQLGRAPLQRRKNLSQSKSESNVSFGANLGASNGQHISRK
LHSPTMMESSSPIIGHVNSSNLSSALPTPTSSTTTPNSDEQLPLTPTTSS
SNSNLNQQQPKSPMKGAPGSTAAALKKKNDEMNNSVLKQVDFEKKYKALP
QFQPEDCQSPSAIAVPSSPRVYGTNYRKKNTAPPPVQKLMCEDDSIDEPA
SAPPTTTQRFFGPDFNNELKELESSDQTGRSPRTPKTPLQSARSDASEKG
HRKVLETRRSLVLQLFAEHGNFPTAQATMAFQSKHSDVFPRKQDLQLKIR
EVRQKLLGQASCTPHSAGPNTPSDSNSSSTTLSASSTSLNMQTTSAADVF
QYY*

FI04109.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:40:02
Subject Length Description Subject Range Query Range Score Percent Strand
cic-PA 1403 CG5067-PA 1..1403 1..1403 7357 100 Plus
cic-PC 1427 CG43122-PC 1..1401 1..1397 7290 99.6 Plus
cic-PD 2141 CG43122-PD 756..2141 18..1403 7263 99.9 Plus
cic-PG 2150 CG43122-PG 760..2150 18..1403 7247 99.6 Plus
cic-PH 1275 CG43122-PH 1..1249 153..1397 6503 99.5 Plus