BDGP Sequence Production Resources |
Search the DGRC for FI04117
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 41 |
Well: | 17 |
Vector: | pBS SK- |
Associated Gene/Transcript | vls-RA |
Protein status: | FI04117.pep: gold |
Sequenced Size: | 1250 |
Gene | Date | Evidence |
---|---|---|
vls | 2008-12-18 | 5.12 accounting |
1250 bp assembled on 2008-09-12
GenBank Submission: BT044184.1
> FI04117.complete ACGATGTTCCCGCAACGCAGCTCGGAGCTGTACCGCACTCCGGTGACCCA CCAGCCTCCGCCGGCACTGGAGCTGGCCGGGAATCTGGAGTACCCGAACC TCAACATTGCGGACCTAAACGCGCGATTGGAAAACCTTTCGCCGCGACTG CACGACTGCTGGGACAGCATCGCTATCAATGATCACAACCACCTGGCCCT GGCCACAAACCGACGCGAAGGACGCCAATGGTGGGGCATGTTGTTCGGCT ACGGACGCGACCAGATGCACCACATGAGCGTGGACTCGGCGAACTTCAAG CTGCAGGCGGAGCACACGGTGAACATTGTGCGCTACGCTGAGGATGATTT CCTACTGGTGGCCCTTGGGGATACCCGACTCCAGGCCTGGTCCACATACT CCAAGGTGCGAGATTCTCAGTCGCCATACTGCCTCTTCCTCGTGGGCGAG TCCAGTGCGCATCCCACACCCATCAGCCAACTGAGCGTCTTCAAGGCGGA TCCCCGCACTGCCGTTTCGGGCTCAGCGGACAGTACCCTCAATGTCTGGG ATCTCTCGGGCGCCGATATGGTGAGCACCTACAGATCGCGCTCCTCGCAT ACCGACAAGTTGACTGGCCTGGCCACACCCGCAGCTTCAGTCGATAAATT TGTGACCTGTGATCGTGGCGGCTGTGCCCGCCTTTGGGATGTCCGGGCAG CGGCTCCATCTTCCACGTGCCTCTATGCGGATGCCAGCCACGTGCTGAGC TTCACCAGTGCCGCCTGGGCAGCTGCCTCGGAGCTGCAGGGTGACAATCA CATCTATCTCGGGGACTACGACGGCAAAGTTCATACTCTGGACATTCGAG TGCCACGAAAACTGGCGGAAACCAGGGAATACTTCGACAAGGGCCATGTC GCCCAGTTATTAATCAATGGGCCCCATCTGGCTGCGATGAGCAATTTGCC CGCCTCCGTGAAAGTGGCCAATGTGCAGGCGGGCCATGAGTTCATCTACA CGCACCAGGACACCCATTCTCGCCTAACTGATGCCGTTTGGACCGATGAT AGCACCCTCATCACCATTGGACATGGCCGCAAAATGGTGACGCACGCGAT CAAATAATTTTGCTGGCGAACAAATTCAATTGCTTTATTTCAAAAAGCGG AATGGTTTGCTGAATAGTCATTCTTACATTTAACACTTATAGTTACTGAA CAGTTACAAGTAATAAATCGTAATAATAGTCCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 20063415..20063959 | 545..1 | 2710 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 20062982..20063359 | 921..544 | 1875 | 99.7 | Minus |
chr2L | 23010047 | chr2L | 20062619..20062931 | 1232..920 | 1520 | 99 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20065057..20065601 | 545..1 | 2710 | 99.8 | Minus |
2L | 23513712 | 2L | 20064624..20065001 | 921..544 | 1875 | 99.7 | Minus |
2L | 23513712 | 2L | 20064259..20064573 | 1234..920 | 1530 | 99 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20065057..20065601 | 545..1 | 2710 | 99.8 | Minus |
2L | 23513712 | 2L | 20064624..20065001 | 921..544 | 1875 | 99.7 | Minus |
2L | 23513712 | 2L | 20064259..20064573 | 1234..920 | 1530 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 20062619..20062930 | 921..1232 | 99 | <- | Minus |
chr2L | 20062983..20063359 | 544..920 | 99 | <- | Minus |
chr2L | 20063417..20063959 | 1..543 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vls-RA | 1..1104 | 4..1107 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vls-RA | 1..1104 | 4..1107 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vls-RA | 1..1104 | 4..1107 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vls-RA | 1..1104 | 4..1107 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vls-RA | 75..1306 | 1..1232 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vls-RA | 75..1306 | 1..1232 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vls-RA | 79..1310 | 1..1232 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vls-RA | 75..1306 | 1..1232 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vls-RA | 79..1310 | 1..1232 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20064261..20064572 | 921..1232 | 99 | <- | Minus |
2L | 20064625..20065001 | 544..920 | 99 | <- | Minus |
2L | 20065059..20065601 | 1..543 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20064261..20064572 | 921..1232 | 99 | <- | Minus |
2L | 20064625..20065001 | 544..920 | 99 | <- | Minus |
2L | 20065059..20065601 | 1..543 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20064261..20064572 | 921..1232 | 99 | <- | Minus |
2L | 20064625..20065001 | 544..920 | 99 | <- | Minus |
2L | 20065059..20065601 | 1..543 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 20064261..20064572 | 921..1232 | 99 | <- | Minus |
arm_2L | 20064625..20065001 | 544..920 | 99 | <- | Minus |
arm_2L | 20065059..20065601 | 1..543 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20064261..20064572 | 921..1232 | 99 | <- | Minus |
2L | 20064625..20065001 | 544..920 | 99 | <- | Minus |
2L | 20065059..20065601 | 1..543 | 99 | Minus |
Translation from 0 to 1106
> FI04117.pep TMFPQRSSELYRTPVTHQPPPALELAGNLEYPNLNIADLNARLENLSPRL HDCWDSIAINDHNHLALATNRREGRQWWGMLFGYGRDQMHHMSVDSANFK LQAEHTVNIVRYAEDDFLLVALGDTRLQAWSTYSKVRDSQSPYCLFLVGE SSAHPTPISQLSVFKADPRTAVSGSADSTLNVWDLSGADMVSTYRSRSSH TDKLTGLATPAASVDKFVTCDRGGCARLWDVRAAAPSSTCLYADASHVLS FTSAAWAAASELQGDNHIYLGDYDGKVHTLDIRVPRKLAETREYFDKGHV AQLLINGPHLAAMSNLPASVKVANVQAGHEFIYTHQDTHSRLTDAVWTDD STLITIGHGRKMVTHAIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15459-PA | 367 | GF15459-PA | 1..367 | 2..368 | 1614 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21593-PA | 367 | GG21593-PA | 1..367 | 2..368 | 1826 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13242-PA | 365 | GH13242-PA | 1..365 | 2..367 | 1386 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
vls-PA | 367 | CG10728-PA | 1..367 | 2..368 | 1944 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12539-PA | 364 | GI12539-PA | 1..364 | 2..367 | 1438 | 69.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26675-PA | 367 | GL26675-PA | 1..366 | 2..367 | 1416 | 67.2 | Plus |
Dper\GL27021-PA | 289 | GL27021-PA | 1..279 | 92..368 | 874 | 58.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10527-PA | 367 | GA10527-PA | 1..366 | 2..367 | 1403 | 66.1 | Plus |
Dpse\GA22348-PA | 379 | GA22348-PA | 1..369 | 2..368 | 1169 | 58.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16967-PA | 367 | GM16967-PA | 1..367 | 2..368 | 1895 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21719-PA | 809 | GD21719-PA | 1..181 | 2..182 | 955 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17892-PA | 370 | GJ17892-PA | 1..365 | 2..368 | 1436 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18685-PA | 367 | GK18685-PA | 1..367 | 2..367 | 1463 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12612-PA | 367 | GE12612-PA | 1..367 | 2..368 | 1836 | 90.5 | Plus |
Translation from 0 to 1106
> FI04117.hyp TMFPQRSSELYRTPVTHQPPPALELAGNLEYPNLNIADLNARLENLSPRL HDCWDSIAINDHNHLALATNRREGRQWWGMLFGYGRDQMHHMSVDSANFK LQAEHTVNIVRYAEDDFLLVALGDTRLQAWSTYSKVRDSQSPYCLFLVGE SSAHPTPISQLSVFKADPRTAVSGSADSTLNVWDLSGADMVSTYRSRSSH TDKLTGLATPAASVDKFVTCDRGGCARLWDVRAAAPSSTCLYADASHVLS FTSAAWAAASELQGDNHIYLGDYDGKVHTLDIRVPRKLAETREYFDKGHV AQLLINGPHLAAMSNLPASVKVANVQAGHEFIYTHQDTHSRLTDAVWTDD STLITIGHGRKMVTHAIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
vls-PA | 367 | CG10728-PA | 1..367 | 2..368 | 1944 | 100 | Plus |